Os08g0288500

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Revision as of 12:55, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0288500| Description = D111/G-patch domain containing protein| Version = NM_001067991.2 GI:297608345 GeneID:4345179| Length = 5677 bp| Def...")
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Gene Name

Os08g0288500

Description

D111/G-patch domain containing protein

Version

NM_001067991.2 GI:297608345 GeneID:4345179

Length

5677 bp

Definition

Oryza sativa Japonica Group Os08g0288500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:11551153..11556829

Sequence Coding Region

11551406..11552101,11552669..11552738,11553810..11553871,11553976..11554050,11554670..11554761
,11555480..11556713

Expression

GEO Profiles:Os08g0288500

Genome Context

<gbrowseImage1> name=NC_008401:11551153..11556829 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:11551153..11556829 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccggcggcaagcgccgccacgcgcgcagcaacccgaccgccggcgggccgcggcacggcgccggggccgggcgccgccgccccgtccccgagctcccctccttcgtctccccggcctccgtcgccgccgcgttctcctcgtcctcctcgggcggccgcggccgcggggggaggggcgggcgccgcggcggcggcggaggcgggtcgtcgaactccgcgtccgactcgtcctcccacgccgtccccttcagctacgccgcgctccgcccctccgcctccttcgagggggcgactcaggtgctggatgtcaccatcgacaccgccccctgcgccgacccggcctccgcctccgtcccggtgtactcgtacggcccggttggcgggatcgggctggggtttcacggcgaggaggaggatgaggaggaggaggctggtgaggctgggctgcatctcggattgggattccggggttgcagcaacgaagaggtggagttggaggaggccaccttagtgacgccgaggaagccgaaggagaagcctaagggcaagcgcaacgagggatttttgtccattgggggaattcggatctacacggaggacatctcatcgccagagtcgggggtgggtgactctgatgaggaatcggaatcagattatgaggggagagatggcaatgatgatggtgatagtgacgaggaaggcagtgatgtcaacgaaggtggttcggagtctgatgaagagttgtctggatcagattcagaggaagacttgagcattggtgattcatcagttgatgatgaggttgttgccgattacatggaggggatcggcgggagtgaggagctgttaagcagcaagtgggtggctggaatgaatttggtcgattcagatgatgacgatgagatggatacagatgaggatgaggatgggttcttgaagaaggtgaagggacagcttgagggttatgccttgatgaatgcatccgagcagtatgggatgaagaggccgagctcagcagatcggttgaagggaaagggcactgctgtcagggcttgtgaccgggacctggcaagtatgcgagtgatgggtctggatgctgtgatgatggtaaaggatgtacgcatggcaaacagattaagaaagggagcaaaggtggcttcatcatcttctcacctctccaggtcctggcctaatgagggtaggaagagcaagaagtatcagagtgtaccaggtgagaaaaagaagcatcggaaggaactcattgcaaagaagcgccgccaacgaatgctaggcagaggagttgatttagatcaaattaatactaaattgaggaagatggtcgtagatcaggttgatatggtatgcttccaaccaatgcacactcgagactgttcgcaggttcaacgccttgcatctatttatcacttgaagagtgggtgtcaaggttcaggaaagaaaagatttgtcactgtgacattaaccgcggattcttctttaccatcttctgagggccaaatccgacttgaaaagctcttgggaactgagcctgaggactttactgtcaattgggagaactctaaacgtccagcccaagtgaagggcctctcagctccaggaaagttggcaaggaatcagacttccagtggaaagaaatcttccaagaaacaagtatcatttgctgaacgtcctgtatcttttgtctcctgtggcactatggcggaatctgttactgagacaattgcagttgccacaaccagtggtgaagtctcatgtgagaaaattgttgaaagcgactctgtcaagctgggaacctttgagatgcacaccaagggctttggttctaagatgatggctaagatgggattcattgagggaactggcctgggcaaagatggccaaggcatgatgcagcccatccagccaattcaacgtcccaaatctcttggactgggagtagaatttgacagcgaggctgaggcaatcaaggcaaggtcagaaccaccaaccaaagcaaggtcagaaccatggcggaatttgaggaaagtggagattggtggcgttggttcctttgagaggcatacaaagggctttggatccaagatgatggcgaggatggggttcgttgagggctctggcctggggaaggatggccagggcatcgtcaaccccttgactgcggtgaggcgacccaagtcaatggggctgggagctaagaataagtattaa</cdnaseq>

Protein Sequence

<aaseq>MAGGKRRHARSNPTAGGPRHGAGAGRRRPVPELPSFVSPASVAA AFSSSSSGGRGRGGRGGRRGGGGGGSSNSASDSSSHAVPFSYAALRPSASFEGATQVL DVTIDTAPCADPASASVPVYSYGPVGGIGLGFHGEEEDEEEEAGEAGLHLGLGFRGCS NEEVELEEATLVTPRKPKEKPKGKRNEGFLSIGGIRIYTEDISSPESGVGDSDEESES DYEGRDGNDDGDSDEEGSDVNEGGSESDEELSGSDSEEDLSIGDSSVDDEVVADYMEG IGGSEELLSSKWVAGMNLVDSDDDDEMDTDEDEDGFLKKVKGQLEGYALMNASEQYGM KRPSSADRLKGKGTAVRACDRDLASMRVMGLDAVMMVKDVRMANRLRKGAKVASSSSH LSRSWPNEGRKSKKYQSVPGEKKKHRKELIAKKRRQRMLGRGVDLDQINTKLRKMVVD QVDMVCFQPMHTRDCSQVQRLASIYHLKSGCQGSGKKRFVTVTLTADSSLPSSEGQIR LEKLLGTEPEDFTVNWENSKRPAQVKGLSAPGKLARNQTSSGKKSSKKQVSFAERPVS FVSCGTMAESVTETIAVATTSGEVSCEKIVESDSVKLGTFEMHTKGFGSKMMAKMGFI EGTGLGKDGQGMMQPIQPIQRPKSLGLGVEFDSEAEAIKARSEPPTKARSEPWRNLRK VEIGGVGSFERHTKGFGSKMMARMGFVEGSGLGKDGQGIVNPLTAVRRPKSMGLGAKN KY</aaseq>

Gene Sequence

<dnaseqindica>4729..5424#4092..4161#2959..3020#2780..2854#2069..2160#117..1350#gtcgccccgcgcaccgcaccgcaccccacccccgcacgcaggaacggaaggtgggtccccccctccctccctccgctcgccgccgcacgaatctcgaggcaggccggaaccctagcatggccggcggcaagcgccgccacgcgcgcagcaacccgaccgccggcgggccgcggcacggcgccggggccgggcgccgccgccccgtccccgagctcccctccttcgtctccccggcctccgtcgccgccgcgttctcctcgtcctcctcgggcggccgcggccgcggggggaggggcgggcgccgcggcggcggcggaggcgggtcgtcgaactccgcgtccgactcgtcctcccacgccgtccccttcagctacgccgcgctccgcccctccgcctccttcgagggggcgactcaggtgctggatgtcaccatcgacaccgccccctgcgccgacccggcctccgcctccgtcccggtgtactcgtacggcccggttggcgggatcgggctggggtttcacggcgaggaggaggatgaggaggaggaggctggtgaggctgggctgcatctcggattgggattccggggttgcagcaacgaagaggtggagttggaggaggccaccttagtgacgccgaggaagccgaaggagaagcctaagggcaagcgcaacgagggatttttgtccattgggggaattcggatctacacggaggacatctcatcgccagagtcgggggtgggtgactctgatgaggaatcggaatcagattatgaggggagagatggcaatgatgatggtgatagtgacgaggaaggcagtgatgtcaacgaaggtggttcggagtctgatgaagagttgtctggatcagattcagaggaagacttgagcattggtgattcatcagttgatgatgaggttgttgccgattacatggaggggatcggcgggagtgaggagctgttaagcagcaagtgggtggctggaatgaatttggtcgattcagatgatgacgatgagatggatacagatgaggatgaggatgggttcttgaagaaggtgaagggacagcttgagggttatgccttgatgaatgcatccgagcagtatgggatgaagaggccgagctcagcagatcggttgaagggaaagggcactgctgtcagggcttgtgaccgggacctggcaagtatgcgagtgatgggtctggatgctgtgatgatggtaaaggatgtacgcatggcaaacagattaagaaagggagcaaaggtggcttcatcatcttctcacctctccaggtcctggcctaatgagggtaggaagagcaagaagtatcagagtgtaccaggtaaaatgccttcactgttttctgttgttttttcttttatgttatccattgtcaaatatgggaaaattagaacaatcagcgggcaagcacatctcactatgtatcttgaattgaaaagtcgtagtgctaagactgccaagcttccattaatcatggaatgttcttactagttgtttgtgtatgttaataacatttaggtttgatttgttttaaagcttttaaattttttgtttcataaagatggcataaagtaagtctggttgtatgctattgtttccactttacagagaatttgagataatagctgataagtattgcccaatttccactctctttttaatagaagtcatgggctcatggcagatggtgtgtattgattttagaaaaatagcactaggttgatcagtgattatctattgtgtacctttttaatacattggcgcaactagcttgttgtgttacattatgattgtccgtctccatatggagaagtaactcaatgtagacctttcaaattgaaaagtctgcagggaatatgattatccttggaaagttcagcttcttaaaaagttgctcggccactgtttacattaatgctcttctttgttcacgtatgttacaattatattatgtttgtgtgcctgctcaaatgttcatgttctcattatatttaacctatattgcgatgggtttgtaaaattttttgtatgtgattcaggtgagaaaaagaagcatcggaaggaactcattgcaaagaagcgccgccaacgaatgctaggcagaggagttgatttagatcaaattaatactgtgagtcttatagttgctttcacatgaagtgaccttattctgaaagttatgcccgtatgattctaaatcatcatagcaggagtctagttattttctaattctccagctcaatcccctgaaaaaaaaggcaagcacacagtcattaatgtctatgatatggtataaagatattagggattgtacaaagttcagtgataaatgcaagaaaatagtagtaatacaacattatgtgaagagaccttttacattttgaaactcagggtctatgcaatgtgattctgtccattgagttttaaaccggaggatgttagtgtggtgctatctggattcagttttgtactctgtttgttaaagtggaggtacaagataagatgtgcacaatatggagaaatgcacatccctagagagagtttcatatccactgtagctcttcttatgctgtctgttttcctttatgttggttttcttaatcaagctggttatgggtaaactttgagctttcatactcgcataggatttcttatgctttctgttgttggatggtacttggttattttcccttccccattccttgttagtataaaatgatgtgtggcctggttctgtttcttatgtgcagaaattgaggaagatggtcgtagatcaggttgatatggtatgcttccaaccaatgcacactcgagactgttcgcaggtattagatgcatgtctgtctatcattgattgtttgtattgcttgttaaagcatttgtattcaagcgcatgctaattgtgccattattgttgttaaatttgtaggttcaacgccttgcatctatttatcacttgaagagtgggtgtcaaggttcaggaaagaaaaggtaagtgccatatgagtaaatttaccgatcctagtagcactcccatgtcatgttgaatcttgccacggacacattggtttgatacaacatgtcataatgatgagtcatttttcccatctcttcgatgatgataggcatgttagttagtttccttaactccttgaggtatgcttatgttgcagcgcggtgagtgataccaaacatcatcattatgcatgcgagttcatgtcatttcaatgtgcctggaatttttgcattgctagggctcaaactaaaatctttacataattgtcgttgtattaagtaatgccttactggtgtaggatcttgttctttccctataccccgactgctctgactgttacagatccatccttagttcctaaccgacttacccactcaaattgctcttgttttatattcgctattttattttactctttaaggtaggaaggtgcatgacctcctgcaacaaaccatctgtcctttatggacagtggtaaagggtgcagtggcttattaaccactcccctgttatgcatgggcactgatacgagagacgtaagacaatgacgtgtttccttgtcgtgttcatcgcgtaagcgatgtgtctgcgcatatagcaactgccataacctggttatctataccaagatggttatgtgttagttgtatgcaggacattgcacctcccaaccatcttgtagcattgcatttttatgctttctatacttacctgctgtttacctattttatatcaattatgacatgtaatggagataatggtagttgcaatctttttcttgtttaaaatcagtttatgttggctagtcaagcccatgtccatatgagaaaattgacatcatatgtggttttgcactatattaaaaatttagttggtgaggttgcaaattaaatggataccccaaatttcaattaacttgcattctaattattttgtgtaagtaaaaaaaaatcatatggaaattctttgatctgctgaatgcagctgcgttgagtcaaatgctaatacaacattcttgccgtaaagtcaataattctgtcttgcagatttgtcactgtgacattaaccgcggattcttctttaccatcttctgagggccaaatccgacttgaaaaggtgtgtatacactgctcatattgttagtcgccactctgttcaattttgaagtgctttgattcgttcagcccttcatgaattcacatcacatttttcctttttttatgcccctcggtttaatattatagtcactttgggtttgtcctaagccaaatatcgtcaagtttgaccaagttagacaaatatagcagtattttcaacacaaaataaatatactataaaaatatatccaatgatggatttaatgaaactaatttgatgtcgtaaatgttggtatgtttttctacaaacttggttaaactttaaaaggtttgacttaggacaaatctaaagtgacttataatatgaaacagagggagtaataaactatgtcgaatctcagtactgtagtatttctacatataacataaaacattgtacatcatttttttgtcttgatattcaccaaaaaacattttatttggcataattggtcttgatattttgttttattgcaatcatgttatctccttgccagtgttaattgttccaatcttctgtctaaattgcttttcttctatatttcagctcttgggaactgagcctgaggactttactgtcaattgggagaactctaaacgtccagcccaagtgaagggcctctcagctccaggaaagttggcaaggaatcagacttccagtggaaagaaatcttccaagaaacaagtatcatttgctgaacgtcctgtatcttttgtctcctgtggcactatggcggaatctgttactgagacaattgcagttgccacaaccagtggtgaagtctcatgtgagaaaattgttgaaagcgactctgtcaagctgggaacctttgagatgcacaccaagggctttggttctaagatgatggctaagatgggattcattgagggaactggcctgggcaaagatggccaaggcatgatgcagcccatccagccaattcaacgtcccaaatctcttggactgggagtagaatttgacagcgaggctgaggcaatcaaggcaaggtcagaaccaccaaccaaagcaaggtcagaaccatggcggaatttgaggaaagtggagattggtggcgttggttcctttgagaggcatacaaagggctttggatccaagatgatggcgaggatggggttcgttgagggctctggcctggggaaggatggccagggcatcgtcaaccccttgactgcggtgaggcgacccaagtcaatggggctgggagctaagaataagtattaataccatatgtgccttctatctatctatgttatctatgttatgtaccttttacagccgcttgagtttgataacctagttgtatatatgctaggagagcataaccccgttggccgcggcaaacagcacgcgaaatcgtgggttccgatgcccctggctgtaggcagtaggttctatcttgtttacattgcggcatttcacatttttcattccctgttgttttgttcaattctctggaggaaagttatttatttcc</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0288500, RefSeq:Os08g0288500