Os08g0289000

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Revision as of 12:55, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0289000| Description = Conserved hypothetical protein| Version = NM_001067992.1 GI:115475721 GeneID:4345180| Length = 4066 bp| Definition ...")
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Gene Name

Os08g0289000

Description

Conserved hypothetical protein

Version

NM_001067992.1 GI:115475721 GeneID:4345180

Length

4066 bp

Definition

Oryza sativa Japonica Group Os08g0289000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:11575292..11579357

Sequence Coding Region

11575460..11576260,11578859..11578954

Expression

GEO Profiles:Os08g0289000

Genome Context

<gbrowseImage1> name=NC_008401:11575292..11579357 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:11575292..11579357 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggacgacgcggtggagacggccgccgagattctggtcagcttccagaacaggaggctggtgcggtggccggagtgggttccgcggccggatgagaagggcgccgccgctgaggagaagaagttgccgggatggaaggaccggcggaagcggacttccaagtccaaaccgccgccggccattttggtgtgtggcctggagctgagggattccggcggggagaaggcggcgtcgattccggccccgctcccgccccccgcgaggaagaagatgttgttcaagatgaaggtcaaggacgagccgacggcggcgcgggggccggagacgccgccggagtacggggccggcgcgggatccggcgcgaatttcagccgggatggcgtggcgaggcctctgccgccacgcgcggtggtgaaggccgagccgacgccggcggcgcggatgcccgagtcgccgccgtactacgtcgcggcggccggatccgccccttccacggccggcggcgaccggcgtccgcgtcctcgccccgtcgagagggcgcacgtcaagacggtcctcgcggcggcgaaggaggccatggaggcgtctagcccagagacccctctggactacgccgccaccaccggatccggcgcgtcctccagcggcgacgagtcgtcgcggaagcggaaggcggcgccgggggcgggcggatccggcggcgcctcgtcgagcggcgacgaggggtgcagctcaccggagaagcggccgtgcctggtcgccggcggcggcgctcagaccgccgcagcggctaaagcagagggggaaaagtttgcggattcgatgaaccgtaacgacgatggcgtgcttctcttcgacctcaacgaatgtgtggataattgcgaagattggtcctaa</cdnaseq>

Protein Sequence

<aaseq>MDDAVETAAEILVSFQNRRLVRWPEWVPRPDEKGAAAEEKKLPG WKDRRKRTSKSKPPPAILVCGLELRDSGGEKAASIPAPLPPPARKKMLFKMKVKDEPT AARGPETPPEYGAGAGSGANFSRDGVARPLPPRAVVKAEPTPAARMPESPPYYVAAAG SAPSTAGGDRRPRPRPVERAHVKTVLAAAKEAMEASSPETPLDYAATTGSGASSSGDE SSRKRKAAPGAGGSGGASSSGDEGCSSPEKRPCLVAGGGAQTAAAAKAEGEKFADSMN RNDDGVLLFDLNECVDNCEDWS</aaseq>

Gene Sequence

<dnaseqindica>169..969#3568..3663#aaatgcttctctcgcctctctcgcctctccctttccaagaaaccaccaatctctctctctctctctctttctctctcgctcgcggcggagaggaggagcagtctcccatctgcggcggccggcggcgtgcgtgcgtgcgggtggctggtgttgtggattccgtttccgatggacgacgcggtggagacggccgccgagattctggtcagcttccagaacaggaggctggtgcggtggccggagtgggttccgcggccggatgagaagggcgccgccgctgaggagaagaagttgccgggatggaaggaccggcggaagcggacttccaagtccaaaccgccgccggccattttggtgtgtggcctggagctgagggattccggcggggagaaggcggcgtcgattccggccccgctcccgccccccgcgaggaagaagatgttgttcaagatgaaggtcaaggacgagccgacggcggcgcgggggccggagacgccgccggagtacggggccggcgcgggatccggcgcgaatttcagccgggatggcgtggcgaggcctctgccgccacgcgcggtggtgaaggccgagccgacgccggcggcgcggatgcccgagtcgccgccgtactacgtcgcggcggccggatccgccccttccacggccggcggcgaccggcgtccgcgtcctcgccccgtcgagagggcgcacgtcaagacggtcctcgcggcggcgaaggaggccatggaggcgtctagcccagagacccctctggactacgccgccaccaccggatccggcgcgtcctccagcggcgacgagtcgtcgcggaagcggaaggcggcgccgggggcgggcggatccggcggcgcctcgtcgagcggcgacgaggggtgcagctcaccggagaagcggccgtgcctggtcgccggcggcggcgctcagaccgccgcagcggctaaagcagaggtgagtcccccccacttttttccccatttgtttttggcccttttacttttgtttccgtttggattcagaactcttgagctctttcttgtgccctgaaatcttctttcttccagtcccttcctcgtgcgattcgcttttatttttctcttcaagttccttcctcgggcgatttgcttgtgatctgtgttcttgcttgtgtgatgattctcgcaacgattttttgttaggaaatcagacgacaagttcccttttttgacttaaaattccaccttgatttgatttgtgtatgggagatgtgcctgcaacgatttttctgacgaaatccgtttgcttttcacctcttttgttcacttattatagaaaaaaatagtcgtactaccatagtgtttatctgtttaatctcaacagaaatttaaacatttactttggacccgtaaattcagcttatttgccaagatgaagcattttttaggtccgttcaaaaaagctcttcctttattttttcactatatcattttagtagtggtagttttccttgtctgttacgatttgtgtatatgtaataataggcaaaaaaaaagaagaaagttctacctgaaaaaagaaaaaaaagtatatcgcgttcgtttgtgtttgggtattcgatgcggactcgtggggcgtaaaaggtgttcgtttgggtagcggccgccgcgtcggcgccagctgtagacggcggcggattctgcgcaccgggccgcggtggccggtgtcgttggatttacccccattttatcaccatcgggcccttctcttccttaaaaaaaatgtatggatttttcttctactatacggagtattttgtaattctagaagaattcagttatggataataattgaataaagtcataaacctgctcaaacccttaaattttttctttcgaaatcaaactataaggaaattttctaggcggtttcgtgttgaactggagtagtagtagtagcagcggctcccgagtcgccgtcacgcgcgttgccttcccctcgggaggtgggccctccgcgtggactgggtgggcccacggtgtcagacgtgcgccagccacgtgttccctcgtgtcctcctaccagagttcgagttaatttgattttcctggtaggaaggggagtaaaaaccgtggaaaatttgtgtgtgtttgcctaggcctttccgttggtttcttcttctgacttgctttgcaaggtttggttggaaggatggatggatcgcccgctttccccgagattctgttgctgttcccccgcgtgggccccaccatgccctgcccgccgcggtggaccaagcaagggccccacgtgtcagcgttttctctctagtattagtatatatttttttggtacatgaaatcatttttgtttttgagcggaatacgtaaaaaagtgtctatttttgtaaaataatttattttatttctcgttctgtagataaaagttgaaataattttgaagttgggtgtgtactagtagtatgctcggctttttcgggattagttttgtgtggctgggaggtggggcccaggatcccgggtgtgaccaaaccggaggggagcaagttgcggcgcggcggtcggcgacgtggccgccggccattggatcccctgcctgacacctccggggcccacccaccggttccgtcactggcggttgtcgcatgccaccacgtgcatctgtagatcttctcttacaaaacgaaatcaatcaaacagaagataattcactttttacatttttttactgcattgattaagggttaattaccggcaatttgatatagagaggtagtacttcatcttaaggggagagattttggttgagaagatgtcggcattcttgatgatgatggcagtggcatattggcatggcatgttgttggagtggagtagctcgattggttaattgggttttgtcagggcgtggtcagtcacgtgatgtccttgtcatcgtgattccttctttctctctcatttttaatttttctgagaatttctctggggacactgacgaggcccccaaagcctcttctgttcagtgagcatcagacaagattaaggttttggacatagcaacaacaacaagtcagatactgtatttgaaatgccactaaacaacaagttcacgagcagagagaccttgcccctgcttgtgaactgtagtagtgtagatttgcagcctttatgctgtgtttttttttagttcggcgcaaagtttggattttgattgaaatcagagatgatgtgactgaaaaattgtgtgtgtatgacaggttgatgtgatagaaaaggaatgaagtttggatccacactttggatctaaacacaaccttaatgctactttgtttggttccagtgcagctattcgaaccattcttgaatgaatgaataaatgaatagtttttctgcttcagtcatggtgttcttgaattggatttttgtttctttctgttaccacttacttttaggagttactactattgcaagtcctgtctatttttatgtcttgcagtttcttgcgtttgcttgaccatatatactgatgataatttctcttgatgttgcgcagggggaaaagtttgcggattcgatgaaccgtaacgacgatggcgtgcttctcttcgacctcaacgaatgtgtggataattgcgaagattggtcctaatgggagtctttgctagtgttcatcatgcctagatcaatgtgggagtttttgctaacatatccgcgctccgtcgggtaaaaaataaacccaaaattgtgtacataaaaagggcaaagccagtaagtagagcagttgacaagagctggagggctttgccttttctttctagattatatattatatgagtagatgataaggtgggcttaggtggtttcattgaatttgtcaggttagtttctagtcagccttgttcattgcactgctcttgatcatatcttattattctgctggctctctcattgcccagtgccctctgctgttgccttcagatcggtgtaaggcatctctgttttaatcttcacttcaatgtggaactgatacagtgcaagaacaatatatttac</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0289000, RefSeq:Os08g0289000