Os08g0292900

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Revision as of 12:55, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0292900| Description = OSH45 protein| Version = NM_001068002.1 GI:115475741 GeneID:4345191| Length = 6459 bp| Definition = Oryza sativa Ja...")
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Gene Name

Os08g0292900

Description

OSH45 protein

Version

NM_001068002.1 GI:115475741 GeneID:4345191

Length

6459 bp

Definition

Oryza sativa Japonica Group Os08g0292900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:11846740..11853198

Sequence Coding Region

11847305..11847307,11850610..11850730,11851197..11851384,11851471..11851602,11852545..11852681
,11852775..11852778

Expression

GEO Profiles:Os08g0292900

Genome Context

<gbrowseImage1> name=NC_008401:11846740..11853198 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:11846740..11853198 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgacgcactacgtcttgctattatgttcgtttaaagagcagctacagcagcatgtccgtgttcatgctatggaagcagtaatggcatgctgggaacttgaacaaaaccttcagagtttgacaggtgcctcgcccggtgaaggcacgggagcaaccatgtcagacggtgaagatgatcaggcagatagcgaggcaaacatgtatgatccaagcttggatggagcggataacatgggtttcggccttcccacagaaagcgagcgatccctaatggagcgtgtccgtcaagagctaaagcatgaactaaagcagggttacaaagagaagctgattgacataagagaagaaattcttcgcaagcgaagagcgggaaagctaccgggagacacgacttctacgttaaaagcttggtggcagtctcatgcaaagtggccatatccaacagaggaagacaaggcacggctagtccaagaaacagggctacagctaaagcagatcaacaactggttcatcaaccaaaggaaaagaaactggcacagtaacccatcttcctccaccagcgtcaaaaccaaacgcaagaggtga</cdnaseq>

Protein Sequence

<aaseq>MTHYVLLLCSFKEQLQQHVRVHAMEAVMACWELEQNLQSLTGAS PGEGTGATMSDGEDDQADSEANMYDPSLDGADNMGFGLPTESERSLMERVRQELKHEL KQGYKEKLIDIREEILRKRRAGKLPGDTTSTLKAWWQSHAKWPYPTEEDKARLVQETG LQLKQINNWFINQRKRNWHSNPSSSTSVKTKRKR</aaseq>

Gene Sequence

<dnaseqindica>566..568#3871..3991#4458..4645#4732..4863#5806..5942#6036..6039#tagctctctacctctctagctagctagctataggtagctagctagtcctcctgctacctaggggggcgacgccgccggacggggaggaggccatggcgttccacggtcacctcccgcacgagatgaccatgcaggcgctcggcgcggacgacgcggcggtggcggcggcggcggcggcgggtggggtcggggcaggcggggcgccggcgtggatgaggtacaacgacgggagcttcctgcacctgcagaccacgtcggactcgtcggcgtcgccgtctggcgctgcggctgcggcggcggctgcggcggcggcgaggacgcggtggcggccgcgatgggcggcggcggcgaggcggacgcggcgcggtgcaaggcggagatactggcgcacccgctgtacgagcagctgctgtcggcgcacgtggcgtgcctccgcatcgccaccccggtcgaccagctcccccgcatcgacgcgcagctcgcgcagtcgcagggcgtcgtcgccaagtactccgccctcgccgccgccgccgccggggacgacggccgcgagctcgaccagttcatggtgagcacatcacaaacctaccctacctctctctctctctctctctctctctctctctctctctctctctctctctctctcttctctcggccttcgtcatcctcacgccctccgctggttgttcggattgccttgggattggtggttccgcgggattaattagggggatttggatgattagtttatcttaatttaatcgcgggaaaaggtcaagcgatctgttctttattactcaggggtgaaaggctaaaagctattcgtcctttgatgcgttttttgattttgcaagcttgtttatttcttcttcttctctcccaagtttgcttccgtagggtttgtgtcaggattcgcggttgctattcagacgcgatttcagttttcaaatcacgaagcctcatgtttctgttgctttttggcctactggtttatcgattttgaagcagaaattaaccgtatccttgtactgccattgcctttcttcttctttttttttcttacccttttgctctgttcttgcagcaatgtcatctgataactttgcttattcctttcacagagaaaaaaattaacataacctttgtttttttaagaaataatctggtttctgctggttggcttctagctctgagatcccgtgtgctcgcaatcaagtagggtttttgactgtttctactggggtctacaattttcatggaaacaatctttcaaatgagtttggtgcgacaagtgacgtaggacgctgtaacctgagtcctgaattcacgctaaacatatcacgtttcggtttcgcctggaatttcacaccgatttcgaccagtttctttcctgcattcaaaaatgtggaggtcacggggcaagtcgtgggggatcatggggagggaaacaatcagccatggctcccacttatctcctctgctgcaatattgaccacctttgctgccattttctgttcctttcccaaagctgggctggtctctctctctcctctggttctctccctctccagttttgacatgggagagggtgtatgtagaatactatgtgtgtgcatcttgaccacgccataaatggtgtagggacttgccgttaccagttgtgggtggtggtggtcattggggtgcaaaagaaaagattgtgggtgggcttggttgtgatgtttctcaccattgtaccctagggcctttgcattttagatccacctgtgtgttctttgctccctcctttttcacaaaatgtatatcagcggtggagccaggaatttataaagatcagggctcaaccaatgcgattcgtcgaatcttcaaactttccatggatttttgaatggatttacaagggatggagacaagcctaggatgctcaagcagtcaagctagccgtctccgtccctgtgtatatgtctattgttctgaagaattcgtttccacatacatatttgtttgttaagaatgctaacagtatgtagttattacgatttttcattccttgtttctaattgaatgctccaaaagaggtaagatgttgtatcatgcatttatatgtagaggtatctatggtcctttctcattgatttttttcttaatttgagctttattgatctgttcttagttcgtacagtgagccatggacaaatattatgaagaggactgggtatggtttcttttaggacatttttcgtttactatatctccttgtgccagtgcagtgatagctgcaaatgcatgttattctgttgtcttggcaatcagtcaaggcatggtccagttctcagcgagtttcaaaatgtgaattataaatgagcgttgatttcagcagcgctgataataataatgcgtaaagccccagcattcatttgattttgatatcgttttccctctgttgcgtctactcagacgaatacaacgtagtagagtttgattgagtaggccggagtatattattgtaggaatggatactatggaactttttttttgcatgtactaaacacgtttcccatattttaaggagtgaagaagcaaatacatttttttttcttttgaaacagaagaagcaaataatagtactagaatggcaagacactgagaatggccaatgcacgtgacattatattatgtttcttgtgtctaatgtgccttgcaatgtgaaaaaagtagtggttgatcttgaataaatgatgcatacccatacaagcatgggcaggaccgtccttacagtacctacttgcactaaaggcttgtgatatggtgtactttttggtccctatgcaagaaatgcgggtacatgtcttctaggacttaaaatactgtctcatttaccccgtgtggccgatgtgtctaaacttagaagtgatttgaattattgattattagttatcccttaacagtagaaaagatattctaccactgataattgaggtggtagtataactagacacagtccattggattagaaaagatggacaatctacattgatttctaggaccatcgcaaaacatcttctgtaagtatcttgtatttgcacacttgaacaggaccaccagaacacaaatatgccaacagtggtccaagatactggttgtttcatcttctttttgtccacttatagtgcaggcctttgatcgtatcaagggtcatacgaccagaactacgatgcaatatagtctcggtcccatctatttttaagcaactaaggattcacccttttttaatttgccttggatagaaaacacaagaaagatatcattattgatttggtggtcctggtcagtttcttgattctttggtcatgtcctggctggtatgctggaccttgtaataataggtagcagccataaagcatcattatgcttcagatagcttctcctaagctagcaacagcaccaacgcactactgatgttgggaccatatatttttccaatttagcccttcgtttgccttacagctaatgaacttggtatgacactgacaacctcaatgtcacaacatggattttttcagagcagaggaattgtacttgtgtgctcggtctgccatacagattgtgtaatgctattaatgtttggtgtttgatctccttttttttaatcaaagattgatccttctgcacgtcccttttcggacgtcctacgtaccatgtgacatcttctctttgcatctcctgcctttcattgcctttgggtattgcatctattttatgatattgttttatatatatagtgattctttcaacatacttgatcactacatttgttttagagtttatcacttcatgttagtaacctgtagttgtttcttttcttagacgcactacgtcttgctattatgttcgtttaaagagcagctacagcagcatgtccgtgttcatgctatggaagcagtaatggcatgctgggaacttgaacaaaaccttcagagtttgacaggtacaacctttttgttatctctttcaattttcataatttacaaaagtaaaacttttattaggaaaaaaaatccaaacttttcttggtaatgcaatgatagtaaagaattgactaatggtttggaaatggcatattgttggagcagcgaattgtttgttccttgctcttgcttagtctggcacgatatgctcttgctcttgcttagtcttgctcttgctcttgtttgttcaagatttttgcttcagatagaaactccaagtccggtttaatccattttctaaaaaaggaaaaaaaaagaaagaaactccaagtttgtgagcattctctatttctaaagctttgagtgttacagacacgatcagagcgtaaattgagagggttttagtattttgctaagttagtttttggtagactggtatcaatcaaattgattaaagaaaatgacaaactggaaattcatggacaggtgcctcgcccggtgaaggcacgggagcaaccatgtcagacggtgaagatgatcaggcagatagcgaggcaaacatgtatgatccaagcttggatggagcggataacatgggtttcggccttcccacagaaagcgagcgatccctaatggagcgtgtccgtcaagagctaaagcatgaactaaagcaggtttgaaatggattccaataattgcttttcagggggaaaaatggacatgttgatgaatctcagtactaatcacttggcaaattcagggttacaaagagaagctgattgacataagagaagaaattcttcgcaagcgaagagcgggaaagctaccgggagacacgacttctacgttaaaagcttggtggcagtctcatgcaaagtggccatatccaacagtaagtgatgatgagagtgagacaattcacatgcttagcttccttatgactaatatactccctccgtttcacaatataagactttctatcattgactatatttgtttagatgttaatgaatctacacatatgtatgtgtctagattcattaacatttatatgtatgtgggcaatgctagaaagtctcacattatgaaacagagggattatttgcattcacaggttagtctagaaggagtaaaatgcaccaacggtccttaaacttatcgggaggtttcacttaggtccacgaacttgcaaagcgcacatcgagggccctaaacttgatttattgtatcattccggtccaaagccatgtttgaccgtggtcttgactacgtggcacgccacgtgaacgatgacatggatttttttattttttctcccttcttccttctttttttcaccactgcgacaacccctcccctcgtgtcgcctctcaccaccgagaaaaaagaaggaagaaagagaaaaaagaaggaagaagggagaaaaaaataaaaaaaaattccatgtcattgtccacgtggcgtgccacgtaggcaagaccacagtcaaacgaggctttggaccggtatgatacaataaaccaagtttagtgatctcgatgtgcgctttacaagttcatgcacctaagtgaaaactcctgacaagtttaaggatcgttggtgtattttactcgtctagaagtctattatttccatgtgtcctgccttctctgaatcttgcgagttttctgaacttgttatggtctcctatactgttcaagcaccttattttattgtcacgcttgttgtgttgcaatgccgtttggccacttgtgccctctcttttcatccattttgggtgttcatcacaggatgtacataactgaattcctctcccttttttttcgtcatgtaggaggaagacaaggcacggctagtccaagaaacagggctacagctaaagcagatcaacaactggttcatcaaccaaaggaaaagaaactggcacagtaacccatcttcctccaccagcgtcaaaaccaaacgcaagaggtaccaaatcaatctttgcacatctgtcatatagcctggagttctgccgatccattgatttgcacttaattcgaacaaaaaaaagtaatgcaggtgataacaattcgtagcagatgatcgccgagggctgaacactatgctgggttacagggcaggaggaattcatccaaagcaataggaggacaattgcttagatcaggaaatgttctgcaagatcaggatcaggagccgtatattagagaaccagttatattttatagacaaaactaattgcaagtaaacatatatagttctgtaagcgcttgatttgaagaaaaggggaaatttttccaaaggggttgtataaaatggcgaaatttatatttcagtttctagataccactgggtaatactgctcatagcactggtgttgatgtttttgttctccatgcgtcgtagacaagcggttgaaccgtccgcttcagacgatttttttcacacgtatatatgtatgtattgctgtgggtttatttagctt</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0292900, RefSeq:Os08g0292900