Os08g0296700

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Revision as of 12:55, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0296700| Description = Disease resistance protein family protein| Version = NM_001068012.1 GI:115475761 GeneID:4345202| Length = 7238 bp| ...")
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Gene Name

Os08g0296700

Description

Disease resistance protein family protein

Version

NM_001068012.1 GI:115475761 GeneID:4345202

Length

7238 bp

Definition

Oryza sativa Japonica Group Os08g0296700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:12062697..12069934

Sequence Coding Region

12062853..12063152,12065060..12069371,12069543..12069658

Expression

GEO Profiles:Os08g0296700

Genome Context

<gbrowseImage1> name=NC_008401:12062697..12069934 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:12062697..12069934 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggacaaggcggcggttgttccacttccaatcaccggaggagtcaacgacgatcgtactgctgcgctgcagcagtgggcttccaccgtcggcttcggaggcgaggtggggcgcctcgtcgaagcccaccgacgcctcgactcggtgctcgcggagacgcaggggaaggagatccggaacaaggagctccagcggcgcctcagggaggcctcgcatgatgctgcccgcgcccgtgacctcctcggcgagctcgagtactaccgcatccgcgaggaggtggagcgcgacgaccacgataagctattgcatgacaatgcaaatggaaatttgcttctctccatgcctcaaagggatgttgagttctttaacaatgatgcagcaaaagatgacaaagacaccacagaaagttctcttagcaacacagattcatctgcatctgctcttcaggttactacgtacattgctagtagcagtagtccagtaccctatctggagactcttaacaagtgcatctcgaatgagataagtaaatacactgaaaaatgctacaggatagccaaacaggtgagtgaagctcttgagcttgaaagtctggattacctttacgcgcacaaataccagagaacaagaacagatcatcgggagacatcaccatgccaaagtgaacccaaagttcatgggagggaccaacagcgtgacttgataataagcaagttaacaagtgaggaatgtgctaggaagaaactctctatccttgccatcatcggtgatggaggtattgggaaaactactctggctaagctagtcttcaacaactcaacagtgtcaaagcattttgacgttctgttatgggtttatgtatctgttcactttgatcaaaataagattatgcaggaaatgttggactccttttgcggggatgagcatgatgaaatcaagaaatcgaaggagcttcaactccaagacaaacttgactacttattgaagtcaaaacgagtgctacttgttatggatgacatgtgggaggatagcacaaaggaaaaatgggatgagctgttaaatccattgcttaaaaacgatgttatggggaacagtgttcttgtcacaactcgtaaaccatctgtggcaacaatgatagaagcagcagatcacatcaacctggatggtttgaaaaaagatgacttttggtgtttgttcaaggaatgtgtatttggacatgagaactataaaggagaaccaagactggaaaaaattgggcagcagatagttgacaagttaaagggcaatcctttagcagcaaagactgtaagcaaagtattgagaaggagctttgacgttgattactggaggagaattctgcataccggtgaatggaagtacaaaaatgatgagaatgatatcatgccggccttgatgatcagctacaaatatcttccagctcaccttcaaagttgtttctcgtactgtgctgtgttcccaaagtatcataggtatgagaaagagcgtctgatcgatatgtggatagcgcaagatttgctatgttccgctgatattcacacacgacctgaggacattggaaatgaatactttgatgatctacttgattggggatttttcgaaaaacagtttgagcactcaaccttactcatcatgcatgatctaattcatgatctggcacagaaggtttcatctgacgaaagctttaccatagagggcaatgagcctaggaatgcaccgccatgtgttcgtcatgtcagtgtaataacagagtgggagtacaaaacaaaattgaatggcactgtgtatcctaatgattctttcctccaagagttctctaattccttccgtgagttgcaacaaaggagcttaagcacattgatgctgtttgggccacatgacttggattttgcagacacgtttcggcaagaactcaatgaggtaaggtcaatccgtgtgttgaaactggagatggtcttctttgacttggattcattgataggcaacatctcagcatttgtcaatcttcgctatctagaactgggctgcttctacaagggccccaggctggagctaccagaagctatatgcaggctgtatcaccttaaagtcctggatataaagaagaactggggtcctagcacatctttgccaagagaaatgagcaagcttgttaacttgcggcattttattgctgaaaaggagttacatgcaaaaatagctggcatcggaaagatggtttccctgcaggagctaaaggcatttgatgtcaaaaaggaccatgagttcagcatatcacagctgagaggactgaatcagctaaggggatcaataagcatttctagtctttacaatgcagggcatgaagaggctagccaagcaaggctctgtgacaaggataacctaacttgtttgcacctgtcatggctgactttatctaggaaccgtgttgcacggcgtactcttcctatcctggaggatcttaaaccacattctggccttaaaaatctgcaagttgttggatacaggcattctttaccatcatggctttgcagcactgtccatctcacctctttgcggtcactccacctggatagatgcatacgttggcaaacaattccacatccccagcagttgcctcttctccaggagctgcatttgattcaactgcctcgtgtttacaaaatagagattggtcctctgaaggtccttgaaatacgctggttgcaaaatctgaggcagtgcatacttttagataaggaacagtcatatgctaccctacagatccttgaagtggagggatgccccaaattggatgaatttctattgcagattttcatgtcttcgggtgtacaaagcacataccaatttcttggtattcacaggcttaagatacacaatgacttccttcgtgctagcatcccgctcctgctcctaaattctttatcagacatagatctgtgtggtgagcactcaaaatttacgaggtttcgactaaaaccatttggcacatcagatgggttgagtctacaaatcaaaggagatagatatattcagaagatagaggaaagattgttcacattagagaaactcaaggatctgcgggaacttgaaatccgggactatcaatcagtgatattccaacgtcaattctgggaaggcttcgaacagttgacatcattgaaaaagtttagagtgatcaagtgcccagaaatattttctaccaactttgagctatttctgcctccgtcagttgaggaacttgagttgagtggatgcaacattacattgatacaactatcacaactcctcgtgaaccttcatttacttaagagtttcaagttaactaattgccaaggggtaacatccttacctgtagggttgtttacagatgaacagaacacaatgtcagaaggctcatggcacattcctcccagatgcttcacgagtctggaaagtttgcaaatctctttcacaacagctccatctgatgcaaattcaattatgcactttacgagcaagaaaggcctaggaagatttgtatctcttaagaaaattgttatagaaaattgccctactctgctatctagagcgctttcaggaggagcatctcatatatctccatcatctttggataaactctgcatgactggtatccaagacagcactctgcagttctcagatgtctcttccatcgcggatttagatgtgtctggatgcccgaagttggcatgtctcgacctgagttcttgtaccgcgctagaaaagttgtgtgttatagattgccgtttgttacagtcaattgaaggtttgccgtcatgctcagcactgagggatttgaaaattcgaaactgtgcattgctgccttcgctcagcgcatcactccacaccctgaaaacactgagcatagagaataacacaaatctagcatctctggaactgaaatcatgcacatcattgcagaaactatgcatcaaagactgcccggcactgacatcatgggaaggtttgaaatcccttgtttctcttgagatcttgaaagttgaagcgtctcctgggttcataacgagatggatatcagcagcagctgaagttaatatcgaggagaagaatttctcactaccacttgaaaagctcaacgttgataacattgatgtcctttgtgtgcccatatgcagccagttaacttctctcaagatattatccattgaagaggatcgtcacgatccagatggtcatgtggagtttttgacagacaaccatgtcaaaggactgtcatttctcacctgcttgagatttcttgatctggaaaaccttgagcaactccggtcactgcctgcagaacttggatcccttgcatccctgcagagactacatgttggcaactgtggacatattacttccctgccggtagggggtctcccagcttcgctcaaggacatggaactctataattgcagcaaagaactaaacgtactgtgccgagatatgcttagacttcgaagaaacttacatttgtgggtggatggcgacgaggaggatttcttttcacagaattgctctgacgaagaaataagtgagcttatgttcgcatatcgtatagcctttacaccaggttcttttttggaagaacagaacaatacgagaacaccttctattttcgatgaagggagcaaaagaaacaaaatatcaaaatacaagagaagaaaaaaggctacagcctacagatga</cdnaseq>

Protein Sequence

<aaseq>MDKAAVVPLPITGGVNDDRTAALQQWASTVGFGGEVGRLVEAHR RLDSVLAETQGKEIRNKELQRRLREASHDAARARDLLGELEYYRIREEVERDDHDKLL HDNANGNLLLSMPQRDVEFFNNDAAKDDKDTTESSLSNTDSSASALQVTTYIASSSSP VPYLETLNKCISNEISKYTEKCYRIAKQVSEALELESLDYLYAHKYQRTRTDHRETSP CQSEPKVHGRDQQRDLIISKLTSEECARKKLSILAIIGDGGIGKTTLAKLVFNNSTVS KHFDVLLWVYVSVHFDQNKIMQEMLDSFCGDEHDEIKKSKELQLQDKLDYLLKSKRVL LVMDDMWEDSTKEKWDELLNPLLKNDVMGNSVLVTTRKPSVATMIEAADHINLDGLKK DDFWCLFKECVFGHENYKGEPRLEKIGQQIVDKLKGNPLAAKTVSKVLRRSFDVDYWR RILHTGEWKYKNDENDIMPALMISYKYLPAHLQSCFSYCAVFPKYHRYEKERLIDMWI AQDLLCSADIHTRPEDIGNEYFDDLLDWGFFEKQFEHSTLLIMHDLIHDLAQKVSSDE SFTIEGNEPRNAPPCVRHVSVITEWEYKTKLNGTVYPNDSFLQEFSNSFRELQQRSLS TLMLFGPHDLDFADTFRQELNEVRSIRVLKLEMVFFDLDSLIGNISAFVNLRYLELGC FYKGPRLELPEAICRLYHLKVLDIKKNWGPSTSLPREMSKLVNLRHFIAEKELHAKIA GIGKMVSLQELKAFDVKKDHEFSISQLRGLNQLRGSISISSLYNAGHEEASQARLCDK DNLTCLHLSWLTLSRNRVARRTLPILEDLKPHSGLKNLQVVGYRHSLPSWLCSTVHLT SLRSLHLDRCIRWQTIPHPQQLPLLQELHLIQLPRVYKIEIGPLKVLEIRWLQNLRQC ILLDKEQSYATLQILEVEGCPKLDEFLLQIFMSSGVQSTYQFLGIHRLKIHNDFLRAS IPLLLLNSLSDIDLCGEHSKFTRFRLKPFGTSDGLSLQIKGDRYIQKIEERLFTLEKL KDLRELEIRDYQSVIFQRQFWEGFEQLTSLKKFRVIKCPEIFSTNFELFLPPSVEELE LSGCNITLIQLSQLLVNLHLLKSFKLTNCQGVTSLPVGLFTDEQNTMSEGSWHIPPRC FTSLESLQISFTTAPSDANSIMHFTSKKGLGRFVSLKKIVIENCPTLLSRALSGGASH ISPSSLDKLCMTGIQDSTLQFSDVSSIADLDVSGCPKLACLDLSSCTALEKLCVIDCR LLQSIEGLPSCSALRDLKIRNCALLPSLSASLHTLKTLSIENNTNLASLELKSCTSLQ KLCIKDCPALTSWEGLKSLVSLEILKVEASPGFITRWISAAAEVNIEEKNFSLPLEKL NVDNIDVLCVPICSQLTSLKILSIEEDRHDPDGHVEFLTDNHVKGLSFLTCLRFLDLE NLEQLRSLPAELGSLASLQRLHVGNCGHITSLPVGGLPASLKDMELYNCSKELNVLCR DMLRLRRNLHLWVDGDEEDFFSQNCSDEEISELMFAYRIAFTPGSFLEEQNNTRTPSI FDEGSKRNKISKYKRRKKATAYR</aaseq>

Gene Sequence

<dnaseqindica>157..456#2364..6675#6847..6962#gcgtagggaaaaggaggagaggattgtaagtttgcaaccagcagagctttgccccggggcgtcggcacgcactgccacctcgccctcgaggcctcgacggcgccacagtgccacacccattctctgttgatccctagctgtagttgtagctggcagatggacaaggcggcggttgttccacttccaatcaccggaggagtcaacgacgatcgtactgctgcgctgcagcagtgggcttccaccgtcggcttcggaggcgaggtggggcgcctcgtcgaagcccaccgacgcctcgactcggtgctcgcggagacgcaggggaaggagatccggaacaaggagctccagcggcgcctcagggaggcctcgcatgatgctgcccgcgcccgtgacctcctcggcgagctcgagtactaccgcatccgcgaggaggtggagcgcgacgaccacgataaggtcagcgcaggttttgttttctggatttttttttattcacctgaggtcctggttgttttgttccccaatcctcctatgtacttgtactacaaatcgaaggcaaattactgcatatttcaaccatcacaatcccactaaattttggcaatttcagagctttcaactgttaaaatagcaacaaatttgataattgctcaagtcaaacatcgccttaccaaaatttttgcgggaatgccaaaaattggctttagtgaagtttgataagatttactttcgcaatacaaaccaaacatgcccatggtaccttcgtgcacgaagcaggctgtggcatgttcgtgggctcgatatgctttctttcatttctcacccaatcagaatgcagtatccatactttggttttgatgtgactagtgaaaaatgttatgccggttacggtggattacaaacctatgccatgaatccatgatgaatgatcataagtacatgcctctttttgcgataattgaaattaatccagcatctgcatcaaaagatgcatctgaccctagtttattacagctttgcaacatgagttgctaaacataactactgactatatgagaatatgaaaatcaaacacaaatcctactactaaatctccaaccatgtgtagagttttgatgacgaccatctcaattttgctacatgccatgatgatatctgatttgtcatcttcattttgcagtagataacagcaatcataatggcacataatcttcgataaagcctcctcatccttaaaaaggcccttcctatatttacctcgatattttgtatcaaaaaatagtcagatttttcaacatgcatatgtatgaagtaaaccacaatcaatcttccagccaacagcacacctgcttgcaatcaaaatggaacaaggcaaaaagatttgagctcacaggcctggaaccaaatgagaaaatggctggttggaaaacacatgttcacacaaaattagcaaaactgtcctaagaatgcactaactcaccaaattggttcactagattgctcagtgtttagattcttgtactaaatacccatttgcaaattgcttttgtgatgtactccctccgtttcacaatgtaagtcactctagcatttcccacgttcatattgatattaatgaatctagatagatataatctagattcattaatattaatatgaacgtgggaaatgctagaatgacttacattttgaaacggaggaagtattggttagtcctcaagctcttgcactaaaccgtaagccacctgccatacttgaggcacaatttactcaagtaaatttgaaacaaattttaatgacagtgtaaaacactgatttactttttagatactagaactaatatcctggcctgtgtgcctggagatacacacagctaaaacactgattaactaattggggaacttataattttgttgagaatgatactgcaggggaggcccttgcagttaaaactattattaaaacaaataagatacagaattacaacagttcaagccagtaatctgtatctttttaccagtaataggaattggtatttatccatattttgttctctcgctatccgtttacttcaacgactggatttgcaaagtgctgtcttgtgcaaatgctctgtttcatacattatgatataataatgtatgtattcaatgcagacaaatttctattatatgtgaaatacttgacactactttgtagtggactcttcaactgtgacgtgtcaaaccaaaatataaatacaacttcttttagtgacatgctttacagaattatcgtttcttgtgggtacagagttatactaaattatgatgcatagcaacttttgatagttgtttaaatccacttttgcccctttttttcagctattgcatgacaatgcaaatggaaatttgcttctctccatgcctcaaagggatgttgagttctttaacaatgatgcagcaaaagatgacaaagacaccacagaaagttctcttagcaacacagattcatctgcatctgctcttcaggttactacgtacattgctagtagcagtagtccagtaccctatctggagactcttaacaagtgcatctcgaatgagataagtaaatacactgaaaaatgctacaggatagccaaacaggtgagtgaagctcttgagcttgaaagtctggattacctttacgcgcacaaataccagagaacaagaacagatcatcgggagacatcaccatgccaaagtgaacccaaagttcatgggagggaccaacagcgtgacttgataataagcaagttaacaagtgaggaatgtgctaggaagaaactctctatccttgccatcatcggtgatggaggtattgggaaaactactctggctaagctagtcttcaacaactcaacagtgtcaaagcattttgacgttctgttatgggtttatgtatctgttcactttgatcaaaataagattatgcaggaaatgttggactccttttgcggggatgagcatgatgaaatcaagaaatcgaaggagcttcaactccaagacaaacttgactacttattgaagtcaaaacgagtgctacttgttatggatgacatgtgggaggatagcacaaaggaaaaatgggatgagctgttaaatccattgcttaaaaacgatgttatggggaacagtgttcttgtcacaactcgtaaaccatctgtggcaacaatgatagaagcagcagatcacatcaacctggatggtttgaaaaaagatgacttttggtgtttgttcaaggaatgtgtatttggacatgagaactataaaggagaaccaagactggaaaaaattgggcagcagatagttgacaagttaaagggcaatcctttagcagcaaagactgtaagcaaagtattgagaaggagctttgacgttgattactggaggagaattctgcataccggtgaatggaagtacaaaaatgatgagaatgatatcatgccggccttgatgatcagctacaaatatcttccagctcaccttcaaagttgtttctcgtactgtgctgtgttcccaaagtatcataggtatgagaaagagcgtctgatcgatatgtggatagcgcaagatttgctatgttccgctgatattcacacacgacctgaggacattggaaatgaatactttgatgatctacttgattggggatttttcgaaaaacagtttgagcactcaaccttactcatcatgcatgatctaattcatgatctggcacagaaggtttcatctgacgaaagctttaccatagagggcaatgagcctaggaatgcaccgccatgtgttcgtcatgtcagtgtaataacagagtgggagtacaaaacaaaattgaatggcactgtgtatcctaatgattctttcctccaagagttctctaattccttccgtgagttgcaacaaaggagcttaagcacattgatgctgtttgggccacatgacttggattttgcagacacgtttcggcaagaactcaatgaggtaaggtcaatccgtgtgttgaaactggagatggtcttctttgacttggattcattgataggcaacatctcagcatttgtcaatcttcgctatctagaactgggctgcttctacaagggccccaggctggagctaccagaagctatatgcaggctgtatcaccttaaagtcctggatataaagaagaactggggtcctagcacatctttgccaagagaaatgagcaagcttgttaacttgcggcattttattgctgaaaaggagttacatgcaaaaatagctggcatcggaaagatggtttccctgcaggagctaaaggcatttgatgtcaaaaaggaccatgagttcagcatatcacagctgagaggactgaatcagctaaggggatcaataagcatttctagtctttacaatgcagggcatgaagaggctagccaagcaaggctctgtgacaaggataacctaacttgtttgcacctgtcatggctgactttatctaggaaccgtgttgcacggcgtactcttcctatcctggaggatcttaaaccacattctggccttaaaaatctgcaagttgttggatacaggcattctttaccatcatggctttgcagcactgtccatctcacctctttgcggtcactccacctggatagatgcatacgttggcaaacaattccacatccccagcagttgcctcttctccaggagctgcatttgattcaactgcctcgtgtttacaaaatagagattggtcctctgaaggtccttgaaatacgctggttgcaaaatctgaggcagtgcatacttttagataaggaacagtcatatgctaccctacagatccttgaagtggagggatgccccaaattggatgaatttctattgcagattttcatgtcttcgggtgtacaaagcacataccaatttcttggtattcacaggcttaagatacacaatgacttccttcgtgctagcatcccgctcctgctcctaaattctttatcagacatagatctgtgtggtgagcactcaaaatttacgaggtttcgactaaaaccatttggcacatcagatgggttgagtctacaaatcaaaggagatagatatattcagaagatagaggaaagattgttcacattagagaaactcaaggatctgcgggaacttgaaatccgggactatcaatcagtgatattccaacgtcaattctgggaaggcttcgaacagttgacatcattgaaaaagtttagagtgatcaagtgcccagaaatattttctaccaactttgagctatttctgcctccgtcagttgaggaacttgagttgagtggatgcaacattacattgatacaactatcacaactcctcgtgaaccttcatttacttaagagtttcaagttaactaattgccaaggggtaacatccttacctgtagggttgtttacagatgaacagaacacaatgtcagaaggctcatggcacattcctcccagatgcttcacgagtctggaaagtttgcaaatctctttcacaacagctccatctgatgcaaattcaattatgcactttacgagcaagaaaggcctaggaagatttgtatctcttaagaaaattgttatagaaaattgccctactctgctatctagagcgctttcaggaggagcatctcatatatctccatcatctttggataaactctgcatgactggtatccaagacagcactctgcagttctcagatgtctcttccatcgcggatttagatgtgtctggatgcccgaagttggcatgtctcgacctgagttcttgtaccgcgctagaaaagttgtgtgttatagattgccgtttgttacagtcaattgaaggtttgccgtcatgctcagcactgagggatttgaaaattcgaaactgtgcattgctgccttcgctcagcgcatcactccacaccctgaaaacactgagcatagagaataacacaaatctagcatctctggaactgaaatcatgcacatcattgcagaaactatgcatcaaagactgcccggcactgacatcatgggaaggtttgaaatcccttgtttctcttgagatcttgaaagttgaagcgtctcctgggttcataacgagatggatatcagcagcagctgaagttaatatcgaggagaagaatttctcactaccacttgaaaagctcaacgttgataacattgatgtcctttgtgtgcccatatgcagccagttaacttctctcaagatattatccattgaagaggatcgtcacgatccagatggtcatgtggagtttttgacagacaaccatgtcaaaggactgtcatttctcacctgcttgagatttcttgatctggaaaaccttgagcaactccggtcactgcctgcagaacttggatcccttgcatccctgcagagactacatgttggcaactgtggacatattacttccctgccggtagggggtctcccagcttcgctcaaggacatggaactctataattgcagcaaagaactaaacgtactgtgccgagatatgcttagacttcgaagaaacttacatttgtgggtggatggcgacgaggaggatttcttttcacagaattgctctgacgaagaaataagtgagcttatgttcgcatatcgtatagcctttacaccaggtatccttttgtacacagataaactggttttcaaactttacttgtgcttcagaattacaatgtatgcttgtcctctctattgattgatgttattctggaaaaaaaactcagaatctttttttttttttgagaaacatcaatcacaatcttactcgttcatttttgcactaggttcttttttggaagaacagaacaatacgagaacaccttctattttcgatgaagggagcaaaagaaacaaaatatcaaaatacaagagaagaaaaaaggctacagcctacagatgaaagactattcttggaagtgttgaatctaaattgcctacgtaacaagaagctacgattccggctgacactctggattttttagacaatggaatctttattataagacacagccaaatactgttactgtggattggtgttgaaatactgtccagtttcaagtgttaaggaaatagagcagaacttcagacatctttcctttaaataatggaattttacacggacatctaccactttattcatgccaaccatttaacaaagggttaattggatctatgc</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0296700, RefSeq:Os08g0296700