Os08g0296900

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Revision as of 12:55, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0296900| Description = Octicosapeptide/Phox/Bem1p domain containing protein| Version = NM_001068013.1 GI:115475763 GeneID:4345203| Length =...")
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Gene Name

Os08g0296900

Description

Octicosapeptide/Phox/Bem1p domain containing protein

Version

NM_001068013.1 GI:115475763 GeneID:4345203

Length

5133 bp

Definition

Oryza sativa Japonica Group Os08g0296900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:12072672..12077804

Sequence Coding Region

12074744..12074901,12075259..12077425

Expression

GEO Profiles:Os08g0296900

Genome Context

<gbrowseImage1> name=NC_008401:12072672..12077804 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:12072672..12077804 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggggaagccggcggcagccaagaagccgccggcgagcgcggcggtcgacggcgacgaggaggtgttcctggagctgtcgcgggagctcaaggaggagggcggcaggctgttcaaccggagggactacgagggcgccgccttcaagtacgacaaggcggtccagctcctccccagcggcggccatgccgacgcggcggcacacctccggacctgcgtcgcgcagtgctacatgcggatggcccccgccgagcaccaccgcgccatccacgagtgcaacctcgcgctggaggcggcgcccaggtacagcagggcgctgctgcggcgggccgcctgcttccaggcgctggaccggccggacctggcttgggaggacgtccggaccgtgcttgcctgggagccggctaaccgcgccgcgcgggagatctccgacaaggtcagggcggcattggaggagaagggcgttcttgtcttggagaaggaacccgtgccgccgccgccggagcacaaggctgttagtgcgaagggacaggggaagttgaagaaatctcataaacagtgtgattctgctattgaggggcaggagctgattcatgtcgaagattatgagcaaagtgagaaaacagagctgaagattaatggtcaggagaatggagaaaatcgtgccgggaaggagcaatttgattgtaatgtacctgtcaagcaagaaattcgaaccgaccagccggaagcaaatggagtaggaaaacatcaatatcatatggacgataaggaaaacaagggtttagataaggaaggaaagaatggcaaaccagggaagcacagtgcaggaaagaaaattaggcgtgctgacgccaagaagcaaaagcattccgctatggagccagtgcatcatgctgaggaaaatcgtcatgagcgttacacggagaccagtgtccatgtcaaggaagcaatgaaggatctgaagctggtctttggggaggacattagatgtgctcaaatgccagctaactgcaatctgtcacaattgagagacatagttcaaaacaagtttccatcgttgaaagcgttgcttattaaatataaggacaaggaaggtgacttggtgacgatcacttcatcggatgagcttagatgggcctacagcttggcagatctggaagggccaattcgactgtacattgtagcggttgatcctgcacaagagctaggtgtggatgtggtcaggagacgctcttcatttgcctcattagagaaagcttattatagcatgtcggagaatgggagcagtaggcatgatgatgatcacaactgctctattgatgactggatgatacaatttgctcggctattcaagaaccatcttggttttgattccgactcgtatttggatctccacgaccttggcatgagattgtactatgaagctatggaagacactgttgcaagtgaagaagcacaggaaatatttcaagttgcagagctaaaattccaggaaatggcagcattggctctgttcaactggggcaatgttcacatggcttctgcgagaaaaaggcctcccttgtcagacgatgcttcaatggaatgtatacttgagcaggttaaggttgcttatgaatgggcttgtgcggaatatgccaaagcgggcgcgaagtatggagaagctgtgaaaacaaaaccagatttttttgaaggtcttattgcacttgggcagcagcagtttgagcaggccaagctctgttggtattatgctcttgcatgtaagatagacatgggaactgaggttttgggattatttaaccatgcagaggataatatggaaaagggaatggggatgtgggagggaatggaaaatacacgcttgagggggctctcaaaaccaagtaaggagaagatcatatttgagaagatgggcatagatgggtacatgaaggatatgtcttccgatgaagcatttgaacaggcttctagtatccgatcgcatgtaaatattttgtggggcaccattctttatgaacgttctgtagtggaatttatcttgggacttcctagttgggaggagtctctaacggttgctatagaaaaatttaagactggaggtgcttctcccgcagacatcaatgtgatggtaaaaaaccattctgctaatgaaactactcaagaaggactgagttttaaggttgaagaaatagttcaagcatggaatgaaatgtatgatgcaaagaagtggagaaatggagtgccatctttccgacttgagccaatattccgacgtagagctccaaagttgcatcatatgctggagcatatacactatgcttga</cdnaseq>

Protein Sequence

<aaseq>MGKPAAAKKPPASAAVDGDEEVFLELSRELKEEGGRLFNRRDYE GAAFKYDKAVQLLPSGGHADAAAHLRTCVAQCYMRMAPAEHHRAIHECNLALEAAPRY SRALLRRAACFQALDRPDLAWEDVRTVLAWEPANRAAREISDKVRAALEEKGVLVLEK EPVPPPPEHKAVSAKGQGKLKKSHKQCDSAIEGQELIHVEDYEQSEKTELKINGQENG ENRAGKEQFDCNVPVKQEIRTDQPEANGVGKHQYHMDDKENKGLDKEGKNGKPGKHSA GKKIRRADAKKQKHSAMEPVHHAEENRHERYTETSVHVKEAMKDLKLVFGEDIRCAQM PANCNLSQLRDIVQNKFPSLKALLIKYKDKEGDLVTITSSDELRWAYSLADLEGPIRL YIVAVDPAQELGVDVVRRRSSFASLEKAYYSMSENGSSRHDDDHNCSIDDWMIQFARL FKNHLGFDSDSYLDLHDLGMRLYYEAMEDTVASEEAQEIFQVAELKFQEMAALALFNW GNVHMASARKRPPLSDDASMECILEQVKVAYEWACAEYAKAGAKYGEAVKTKPDFFEG LIALGQQQFEQAKLCWYYALACKIDMGTEVLGLFNHAEDNMEKGMGMWEGMENTRLRG LSKPSKEKIIFEKMGIDGYMKDMSSDEAFEQASSIRSHVNILWGTILYERSVVEFILG LPSWEESLTVAIEKFKTGGASPADINVMVKNHSANETTQEGLSFKVEEIVQAWNEMYD AKKWRNGVPSFRLEPIFRRRAPKLHHMLEHIHYA</aaseq>

Gene Sequence

<dnaseqindica>2904..3061#380..2546#gtccgactccacccgcggcttatccctccttttttttttctttttcccttgctctcctccgctgtttgcttccccgcctcgtcttctcggttttttccgtgcggtcgaagcatcggttccttataccatacctttgcccccgttcttgattcggttcttgccaacagctttgtaacttctcgggcgcctcattggagtttctttgtgagattcgcaagggggagaggaggagtcctttggtcaagcccctgtttctccatttctggttctctgtccgtgcagatttgctgaggaagtagttcttgggttcatcagggagcgagaggtgcgggatttgaaggggaagccgcggggcggccgggcctgggcgccggggcccatggggaagccggcggcagccaagaagccgccggcgagcgcggcggtcgacggcgacgaggaggtgttcctggagctgtcgcgggagctcaaggaggagggcggcaggctgttcaaccggagggactacgagggcgccgccttcaagtacgacaaggcggtccagctcctccccagcggcggccatgccgacgcggcggcacacctccggacctgcgtcgcgcagtgctacatgcggatggcccccgccgagcaccaccgcgccatccacgagtgcaacctcgcgctggaggcggcgcccaggtacagcagggcgctgctgcggcgggccgcctgcttccaggcgctggaccggccggacctggcttgggaggacgtccggaccgtgcttgcctgggagccggctaaccgcgccgcgcgggagatctccgacaaggtcagggcggcattggaggagaagggcgttcttgtcttggagaaggaacccgtgccgccgccgccggagcacaaggctgttagtgcgaagggacaggggaagttgaagaaatctcataaacagtgtgattctgctattgaggggcaggagctgattcatgtcgaagattatgagcaaagtgagaaaacagagctgaagattaatggtcaggagaatggagaaaatcgtgccgggaaggagcaatttgattgtaatgtacctgtcaagcaagaaattcgaaccgaccagccggaagcaaatggagtaggaaaacatcaatatcatatggacgataaggaaaacaagggtttagataaggaaggaaagaatggcaaaccagggaagcacagtgcaggaaagaaaattaggcgtgctgacgccaagaagcaaaagcattccgctatggagccagtgcatcatgctgaggaaaatcgtcatgagcgttacacggagaccagtgtccatgtcaaggaagcaatgaaggatctgaagctggtctttggggaggacattagatgtgctcaaatgccagctaactgcaatctgtcacaattgagagacatagttcaaaacaagtttccatcgttgaaagcgttgcttattaaatataaggacaaggaaggtgacttggtgacgatcacttcatcggatgagcttagatgggcctacagcttggcagatctggaagggccaattcgactgtacattgtagcggttgatcctgcacaagagctaggtgtggatgtggtcaggagacgctcttcatttgcctcattagagaaagcttattatagcatgtcggagaatgggagcagtaggcatgatgatgatcacaactgctctattgatgactggatgatacaatttgctcggctattcaagaaccatcttggttttgattccgactcgtatttggatctccacgaccttggcatgagattgtactatgaagctatggaagacactgttgcaagtgaagaagcacaggaaatatttcaagttgcagagctaaaattccaggaaatggcagcattggctctgttcaactggggcaatgttcacatggcttctgcgagaaaaaggcctcccttgtcagacgatgcttcaatggaatgtatacttgagcaggttaaggttgcttatgaatgggcttgtgcggaatatgccaaagcgggcgcgaagtatggagaagctgtgaaaacaaaaccagatttttttgaaggtcttattgcacttgggcagcagcagtttgagcaggccaagctctgttggtattatgctcttgcatgtaagatagacatgggaactgaggttttgggattatttaaccatgcagaggataatatggaaaagggaatggggatgtgggagggaatggaaaatacacgcttgagggggctctcaaaaccaagtaaggagaagatcatatttgagaagatgggcatagatgggtacatgaaggatatgtcttccgatgaagcatttgaacaggcttctagtatccgatcgcatgtaaatattttgtggggcaccattctttatgaacgttctgtagtggaatttatcttgggacttcctagttgggaggagtctctaacggttgctatagaaaaatttaagactggaggtgcttctcccgcagacatcaatgtgatggtaaaaaaccattctgctaatgaaactactcaagaaggttagaataactttcctgcagcattttgtttgcaatttctcagtttgctttatattgtttatttgcccaatttttttgttctattttgcaacttcgaaaagcaagatgcaatttttttaacacttagagccctctattaggacaaggtcgttctcctatatagataaagaaatatggtatgccgtatgcttaataaatgttgatgtaccagtatttagctgctaactagtagccgctgtgataagcttcagatttcgtgtgaactgtgtatagaacattgtgttttttgtgtgtgccgatcctaagaacatagttttgataccaagttcttacaagatttacctcttttatatttaggactgagttttaaggttgaagaaatagttcaagcatggaatgaaatgtatgatgcaaagaagtggagaaatggagtgccatctttccgacttgagccaatattccgacgtagagctccaaagttgcatcatatgctggagcatatacactatgcttgaccctctaatatatataagaggctctggtttgtcatcatggagaagttatttcatgattttatcaggtaatgtcttgccttgcaaatattatcggcattgacaggctgcaaacagagcttcaccaaggccaattataccagaaaatttatgatgatgtccctctttttagataattggtcctggtttgaagtaatttagtatcttagactacttttcatgtcaaggtgaaaactaaaaatattagcttagaacaagtaagcgggaaaaaatgtctatccttatgtacctggaaattgacttgttatcagttggtgtccaggatttttacttcaacctgtacttttatccttgtgaattggttaaaacttactttgatagaataatagaaaataaatgtctaataatttgttaaatgaggaatgcaagtgccaaagtatgatatattaaagcactcatgttctacaactactacatcttgtgtgtgtgtgtgtctcccttctctcagaaagcacagtccgtttacacaacattacagcttcacctaatacaccatctgtgaaatacaaatgcagggcactagggtatcaagggatcttatactcagttgtttttatctgttactcctacagctgttgaactaaaggagctaacggtagtcagccacccctcaggtgttgattgaatgtactgaaactagattgttgtcatattttgtcgaatttcaatcatcagactattagtgacaaagtaaatccttagctgtgaagtcatggatatttgcatccagtaacatgacctaatggaggaatactttagaaaaggtccaacatatgcattaaaattccaacataacttgcatacagtgacaactaggaaaaactcctccagattacacctctaccaggtgctctttttcttcatatcaggagaaaaaaaacatgaacaaagaagaatttggaatattatttgcactgttatataatatattttctgcatgatatggcattataaatgattttgttttttttcgaggaaacgattgcaattttttgaagatgtaaaaaaccaatttatacataactattttttaggtctctaatttttctttttattaggaatacaaatttaacctgattggtttgaaggaccactagcttatattgtacaatattgcactcaatgtaatctcatccgctttaattgcttttgctcctgatctacactgtgagatagcattaacttgtctaatttctatgcagttcttctacatagtaatataatttgtattgaaatacagttgtaatttctggagaatgattatgcttgtcactaaacatttaattgaatattttgcggaactgtaacattaggaaatatagccctctgtcattaggagaaatacagtgaccaacaaatgatacaggcagtagtcatttttgtttccttactgctattgtttactgtctctgcttacatatctccatgtgcaataccagtattttatccccttggatcctattttatttttctgaccttctctctaatggttgcaggtttgtttattctgggagctgtactgcacttactcgtcccgccaaaagaaaaaaatataagaaaaagaggaaaagaaaaggaaatattctcttcaacttcaagctacagattggttgagagtagtgtgtaggggtttcctcaactgaaaagacaaaaagaaagtgctaacaatgtggcttgcgtttgctgttatatttggtgcttcacgcaaccttctgcttgatgctatatttcctttcaagagatactgtggatattttgatgttgcacttcctcatatttcagtcatggaagtgcttcaagttgttaggtcatcataggaaatttctgaggatacactaattgtatttcacttgtgtagaagatcaccccagctgtgttttacacttttactccaggtcacacatgaagaaagctgaatacagttcgtgtaacatgtagctgaagtagcaggcacagaatgcttgtagtctaattgtgtgaaacagatgcttttattgaagaagttatcagatact</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0296900, RefSeq:Os08g0296900