Os08g0299400

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Revision as of 12:55, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0299400| Description = Similar to MGDG synthase type A| Version = NM_001068022.1 GI:115475781 GeneID:4345212| Length = 3430 bp| Definition...")
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Gene Name

Os08g0299400

Description

Similar to MGDG synthase type A

Version

NM_001068022.1 GI:115475781 GeneID:4345212

Length

3430 bp

Definition

Oryza sativa Japonica Group Os08g0299400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:12354096..12357525

Sequence Coding Region

12354096..12354221,12354442..12354614,12354723..12354884,12354979..12355120,12355232..12355456
,12355587..12355649,12355733..12355807,12357147..12357407

Expression

GEO Profiles:Os08g0299400

Genome Context

<gbrowseImage1> name=NC_008401:12354096..12357525 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:12354096..12357525 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>tgcgggaggaagacggcggcggcgaagaacgtgctcatcctcatgagcgacaccggcggcggccaccgcgcatccgccgaggccctccgcgacgccttccgcctcgagttcggcgacgcctaccaggtgttcgtgagagatttggggaaggagtacggcgggtggccactgaacgacatggagcggtcgtacaagttcatgatccgccatgtccggctctggaaggtggcgttccacggcacttcgccgcgctgggtgcacggcatgtacctcgccgcgctggcctatttctacgccaacgaggtggtggccgggatcatgaggtacaaccccgacattatcatcagcgtgcacccgctgatgcagcacatcccgctgtgggtgctcaagtggcagagcctccaccccaaggtgccattcgtcaccgtcatcaccgacctcaacacctgccacccgacatggttccaccatggcgtgacgaggtgctactgcccgtcggcggaggtggccaagagggcactgctccgggggctcgagccgtcccaaatccgtgtgtacgggttgccgatcaggccgtccttctgccgcgccgtgctcgacaaggatgagctgaggaaagagctggacatggatcccgacctgcctgcagtgctactgatgggcggcggcgaggggatgggtccggtggaggagacggcgagagcactcagcgacgagctctacgatcgccggagacgccggcctgtcgggcagatcgttgtcatctgtggcaggaaccaggtgctgcggtccacgctgcagtcgtcacggtggaatgtccctgtcaagattagagggttcgaaaagcagatggagaagtggatgggcgcttgcgattgcatcatcacaaaggctggtcctggtacaattgcagaggccctgataagaggactcccaattattctcaacgacttcatacctggacaggaagtcgggaatgtgccttacgtcgtggacaatggtgccggtgtgttctccaaggacccgagggaagccgcgagacaggttgccagatggttcaccacacacacaaacgagctccggagatactccctcaacgcgctgaagctagcgcagccagaagccgtgttcgacatcgtgaaggacatccacaagctccagcagcagcctgccacggtgacgcggatcccttactccctgacctcatcgttctcatacagcatatga</cdnaseq>

Protein Sequence

<aaseq>CGRKTAAAKNVLILMSDTGGGHRASAEALRDAFRLEFGDAYQVF VRDLGKEYGGWPLNDMERSYKFMIRHVRLWKVAFHGTSPRWVHGMYLAALAYFYANEV VAGIMRYNPDIIISVHPLMQHIPLWVLKWQSLHPKVPFVTVITDLNTCHPTWFHHGVT RCYCPSAEVAKRALLRGLEPSQIRVYGLPIRPSFCRAVLDKDELRKELDMDPDLPAVL LMGGGEGMGPVEETARALSDELYDRRRRRPVGQIVVICGRNQVLRSTLQSSRWNVPVK IRGFEKQMEKWMGACDCIITKAGPGTIAEALIRGLPIILNDFIPGQEVGNVPYVVDNG AGVFSKDPREAARQVARWFTTHTNELRRYSLNALKLAQPEAVFDIVKDIHKLQQQPAT VTRIPYSLTSSFSYSI</aaseq>

Gene Sequence

<dnaseqindica>1..126#347..519#628..789#884..1025#1137..1361#1492..1554#1638..1712#3052..3312#tgcgggaggaagacggcggcggcgaagaacgtgctcatcctcatgagcgacaccggcggcggccaccgcgcatccgccgaggccctccgcgacgccttccgcctcgagttcggcgacgcctaccaggtcggtcggtccgtccgctcaatgcccgctgttccttgcgctccaagcctcggtcctctcctccccgctccgaaattacagccgcccccaaattcaatttgctcgccaaaacatttgaactcacaatcacatgaattgtttgtaaactggtttgatgaatctcttgatttctcgcgaaaaaaaattgaactccaatcacaactgaattgctttcgcgcaggtgttcgtgagagatttggggaaggagtacggcgggtggccactgaacgacatggagcggtcgtacaagttcatgatccgccatgtccggctctggaaggtggcgttccacggcacttcgccgcgctgggtgcacggcatgtacctcgccgcgctggcctatttctacgccaagtacgcacgcacgcagccatcacaacttgatcgtccaatccaaatcacgttctgtttccgtctctgttcatccgatcgattcgcgaaaactgacatggttgatttcagcgaggtggtggccgggatcatgaggtacaaccccgacattatcatcagcgtgcacccgctgatgcagcacatcccgctgtgggtgctcaagtggcagagcctccaccccaaggtgccattcgtcaccgtcatcaccgacctcaacacctgccacccgacatggtaaccagttcagttcaccggagccacgcactctcgccggcctcgccacggcgcggcgcgatctcagattgatcgatagagcttatttgtgcaggttccaccatggcgtgacgaggtgctactgcccgtcggcggaggtggccaagagggcactgctccgggggctcgagccgtcccaaatccgtgtgtacgggttgccgatcaggccgtccttctgccgcgccgtgctcgacaaggtcggtcgatccggttgccgcgcattttcagataatcttcatgagccgcacattgctgcattgcactgacgcagagctgaactgaactctgctcggggtttggggtgacaggatgagctgaggaaagagctggacatggatcccgacctgcctgcagtgctactgatgggcggcggcgaggggatgggtccggtggaggagacggcgagagcactcagcgacgagctctacgatcgccggagacgccggcctgtcgggcagatcgttgtcatctgtggcaggaaccaggtgctgcggtccacgctgcagtcgtcacggtggaatgtccctgtcaaggtaccatgtatatgccgaatctggggaggatgatgccgtgctagatgcgcatttctgctcttactgcgtttggtagtgaccactggctgacatttttacattttcttttctctttttgttttgatctcagattagagggttcgaaaagcagatggagaagtggatgggcgcttgcgattgcatcatcacaaaggttggttcttggactgatggaggagttgatggtttttttttttttactgtttttacttaggaatgtttgtgtcctgtttgcaggctggtcctggtacaattgcagaggccctgataagaggactcccaattattctcaacgacttcatacctggacaggtgtgtgcggatgcaactatactgaattcgttagagtaacaaaattgtttttctgattttaagactatactcaacacaaatttattatgaaaatatatttcaattattaatttaataaaactaatttggtattataaatattactatatttgtgcataaacatagtcaaatttaaagtagtcaaaacgtgtgtacactgttgttgcagcaactgcaactgcattcacagtaatgccgaccgaacaggcccaatatgacaacatgcgtgcgtactttatttcgaaaatgcttctcctcggacgtccgactgaaggagaaaaatcggatggactgagtctgacacacatcctatcaagcctatacacatatacctttaacgatattcaaaacaatttttctcttaaattacttatccaatctacaatctgatcacaccgttgtattcgttgtaattaaatctttacaacaagatgtcacatgattatattctgattaaaaataatcatatgtttcaatccattaacactctttgtttcatacgcaatagtaatatgtttcaatatgtctcttcagcatgtttcacaaatttcgtggaactacatctcactactctctctcctctctccacctcatacatacatgcatgcattttagcgagcttcaaaacaacttttctcgtaaactaattatccaatctatgatccgaacacatcggtatattcgttgtaattaaatctttacaacaagatatcatatgattatattttgatgaaagaaaaacatatgtttcaatccgttaacactagttgttttatatgtgatagcgatatgtttcaacatgtatctttttcatgtttcataaaatttttaaatgtttcagttgctgattttttgtttcaccatatataatttgatgtttcactcattggtcaactagaacatttgaccaaccaattttctttgggacataggacgttagatgggaagattcctcatgattgaggagtgaagaatgaagtgcagcaatatacacacacatacgctcgctgcggctgggcgtccaatatttggtgagatatcggacgtccgagccgtagcgctctccactttattttggaaaaaaagagtcatccagtccctgttttagttaagtggagtctggcaattacatcgctctcagaaaaaaaaaatcaaatggagcccttgtttagatggaccggaatgcatgtatatgggccatggttatatatacacgtgagtgggccaaaatattttttgaaagaagggatggccaagatattgaggctaaacaaatatcgtccctcttgtcgtcgcacaggaagtcgggaatgtgccttacgtcgtggacaatggtgccggtgtgttctccaaggacccgagggaagccgcgagacaggttgccagatggttcaccacacacacaaacgagctccggagatactccctcaacgcgctgaagctagcgcagccagaagccgtgttcgacatcgtgaaggacatccacaagctccagcagcagcctgccacggtgacgcggatcccttactccctgacctcatcgttctcatacagcatatgaaaaaccatcaaggttacaggatgtactatgctatgctctgcaaacatgctttgcctcggaaggttggtccgcttgctgaagaacttgtacatactgaattggatttgttcgtttgtcc</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0299400, RefSeq:Os08g0299400