Os08g0302000

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Revision as of 12:55, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0302000| Description = Similar to Peroxidase 40 precursor (EC 1.11.1.7) (Atperox P40)| Version = NM_001068032.1 GI:115475801 GeneID:4345222|...")
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Gene Name

Os08g0302000

Description

Similar to Peroxidase 40 precursor (EC 1.11.1.7) (Atperox P40)

Version

NM_001068032.1 GI:115475801 GeneID:4345222

Length

1795 bp

Definition

Oryza sativa Japonica Group Os08g0302000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:12543959..12545753

Sequence Coding Region

12544055..12544369,12544465..12544656,12544767..12544932,12545018..12545448

Expression

GEO Profiles:Os08g0302000

Genome Context

<gbrowseImage1> name=NC_008401:12543959..12545753 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:12543959..12545753 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggatcagctgctggccctggcggtggcagtcccgctgtttgctcttgccagtgcacttgctgctgcctctgctacgccggtcaacaagtcctgcctcaatggtagcaccggcgccgccgtcagcatagggtacggtggtgccagcgctagcgctggcgccggcgccggcgtgtctcttggcaccgacgcgtactggttggcctgcccacttgccgaggagatcgtccgcgacgtcgtggagagggctgtcgccgccgacccccgcatggcggcgtccctcctccgtctccacttccacgactgctttgtcaatggctgtgatggctccgtgctcttggacgacaagccgttattcatcggcgagaagacggccgggccgaacgcaaactcgctccggggattcgaggttatcgacgccatcaaagccgagctcgagaacgcgtgcccggagaccgtctcctgcgctgacgtcctcgccatcgccgcgcgcgactctgtcgtggcatcaggcgggccgagctggcaggtggaagtcggccggaaggacagccgcacggcgagcctgcagggcgccaacaccaacctcccggcgcccacgtccggcgtcgccaccctcgtgcagaagttccggaacgttggcctctcggccaaagacatggtcgctctctccggcgcgcacaccattggtaaggcgcggtgcacgacgttcagcgcacgcctcgctggcgtcggcgcctcggccggcggcggtgccactccaggtgacctttcgttcctcgagtcactgcaccagctgtgcgcagtgtccgccggctcggcgctggcgcacctggaccttgtcacgccggccactttcgacaaccagtactacgtcaacctgctctccggcgagggcttgctgccgtccgaccaggcgctggcctcggccggagcagctgctgccggggcggaggacgtggccggcctcatcgcagcctacgctttcgatgcgttgctcttcttcgacgacttcgcatcatctatgctacggatggggaggctggcgccgggagcgggcaccgcctccggcgaggtccgccgcaactgccgggtggtgaactag</cdnaseq>

Protein Sequence

<aaseq>MDQLLALAVAVPLFALASALAAASATPVNKSCLNGSTGAAVSIG YGGASASAGAGAGVSLGTDAYWLACPLAEEIVRDVVERAVAADPRMAASLLRLHFHDC FVNGCDGSVLLDDKPLFIGEKTAGPNANSLRGFEVIDAIKAELENACPETVSCADVLA IAARDSVVASGGPSWQVEVGRKDSRTASLQGANTNLPAPTSGVATLVQKFRNVGLSAK DMVALSGAHTIGKARCTTFSARLAGVGASAGGGATPGDLSFLESLHQLCAVSAGSALA HLDLVTPATFDNQYYVNLLSGEGLLPSDQALASAGAAAAGAEDVAGLIAAYAFDALLF FDDFASSMLRMGRLAPGAGTASGEVRRNCRVVN</aaseq>

Gene Sequence

<dnaseqindica>97..411#507..698#809..974#1060..1490#aatcataccatcacaaacaccaactgcaactggagtagatagcgctacctctctccgggctgaaagctactggccattatcattgttcttccagccatggatcagctgctggccctggcggtggcagtcccgctgtttgctcttgccagtgcacttgctgctgcctctgctacgccggtcaacaagtcctgcctcaatggtagcaccggcgccgccgtcagcatagggtacggtggtgccagcgctagcgctggcgccggcgccggcgtgtctcttggcaccgacgcgtactggttggcctgcccacttgccgaggagatcgtccgcgacgtcgtggagagggctgtcgccgccgacccccgcatggcggcgtccctcctccgtctccacttccacgactgctttgtcaatgtgattatctttctgtttgccgcgctacatgtgtgaagtggtcgtcactcgtcagggccattgatgtgagcatgtcgatgtgtgttttttgctagggctgtgatggctccgtgctcttggacgacaagccgttattcatcggcgagaagacggccgggccgaacgcaaactcgctccggggattcgaggttatcgacgccatcaaagccgagctcgagaacgcgtgcccggagaccgtctcctgcgctgacgtcctcgccatcgccgcgcgcgactctgtcgtggcagtaagccatatctagctaatagccaagcagatatataccacgcatgtgtgtaaaccatccaaactgtaattgttgctcacgttgtggttgtgtctttttcgaatgatcagtcaggcgggccgagctggcaggtggaagtcggccggaaggacagccgcacggcgagcctgcagggcgccaacaccaacctcccggcgcccacgtccggcgtcgccaccctcgtgcagaagttccggaacgttggcctctcggccaaagacatggtcgctctctccggtaaccaaggctcctccatcttcgaattcgaatacgttacagatagctcgcatatgttcatggattgcgtccatgcatgacgcaggcgcgcacaccattggtaaggcgcggtgcacgacgttcagcgcacgcctcgctggcgtcggcgcctcggccggcggcggtgccactccaggtgacctttcgttcctcgagtcactgcaccagctgtgcgcagtgtccgccggctcggcgctggcgcacctggaccttgtcacgccggccactttcgacaaccagtactacgtcaacctgctctccggcgagggcttgctgccgtccgaccaggcgctggcctcggccggagcagctgctgccggggcggaggacgtggccggcctcatcgcagcctacgctttcgatgcgttgctcttcttcgacgacttcgcatcatctatgctacggatggggaggctggcgccgggagcgggcaccgcctccggcgaggtccgccgcaactgccgggtggtgaactagctagctaggttgctgcatgaaacaagaaggaagctgattatgctcccaaaattaattaggagtatctgtgcatcagataattgcgccagctatatatgtatgtgtctgctagtttctcaatctagtcatgtatcgttaattagctaaaaagatgatagctggattatccattatcttaaaaaaaattaactaatggtgtctgatatttgatttgtttagttaatcagcttatctgatatatatatgactatcctgcatgtaatcgaataactatactaataaaatcgggcaagtcattttcagtc</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0302000, RefSeq:Os08g0302000