Os08g0313200

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Revision as of 12:56, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0313200| Description = Similar to (clone pCDH1) carbon monoxide dehydrogenase (cdhA)| Version = NM_001068049.1 GI:115475835 GeneID:4345241| ...")
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Gene Name

Os08g0313200

Description

Similar to (clone pCDH1) carbon monoxide dehydrogenase (cdhA)

Version

NM_001068049.1 GI:115475835 GeneID:4345241

Length

8491 bp

Definition

Oryza sativa Japonica Group Os08g0313200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:13447088..13455578

Sequence Coding Region

13447126..13447329,13452347..13452434,13452510..13452574,13453358..13453406,13453945..13453997
,13454715..13454830,13454947..13455004,13455085..13455159

Expression

GEO Profiles:Os08g0313200

Genome Context

<gbrowseImage1> name=NC_008401:13447088..13455578 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:13447088..13455578 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggcgccacgctgctgctcctgtgcgccgacttctcggctgttgccggcggccgccggcggccttccctgccctcggagccacggttggcggctcccgctgctgggtcccgtgcgccgccgtcgagagcctccgtccgcccgtccgctgccgccgccccgctcgccgcgcgcggcctgccgcaccacgcctccgtcgctgggcaaaacagtggaatttacactgttggtgattttatgactaaaagggaagaactccatgttgtgaagtcaacaacttcagtcgatgaagcccttgagatgctggtggagcataggataactggctttcctgttattgatgacgagtggaatttggttggcgttgtgtcagattatgatctcttagcactcgattcaatatcaggaaatggacttgcggaagtagacatatttcctgaggtggatagtacttggaagacgttcaatgagatacagaagctcttgagcaaaaccaatgggaaagtcattggtgatgttatgacgtctgcacctcttgtggtgcgtgaaactactaaccttgaagatgctgcaaggttactccttgaaactaagtaccgcaggttacctgtagttgacagttcaggcaaattggttgggatcataacaagagggaacgtcgtcagggctgcccttaaaattaagaaaaagtttgaaggtgaactttga</cdnaseq>

Protein Sequence

<aaseq>MGATLLLLCADFSAVAGGRRRPSLPSEPRLAAPAAGSRAPPSRA SVRPSAAAAPLAARGLPHHASVAGQNSGIYTVGDFMTKREELHVVKSTTSVDEALEML VEHRITGFPVIDDEWNLVGVVSDYDLLALDSISGNGLAEVDIFPEVDSTWKTFNEIQK LLSKTNGKVIGDVMTSAPLVVRETTNLEDAARLLLETKYRRLPVVDSSGKLVGIITRG NVVRAALKIKKKFEGEL</aaseq>

Gene Sequence

<dnaseqindica>39..242#5260..5347#5423..5487#6271..6319#6858..6910#7628..7743#7860..7917#7998..8072#gtgtgtgtgtgtgacgggggtcgggggaacctgctcccatgggcgccacgctgctgctcctgtgcgccgacttctcggctgttgccggcggccgccggcggccttccctgccctcggagccacggttggcggctcccgctgctgggtcccgtgcgccgccgtcgagagcctccgtccgcccgtccgctgccgccgccccgctcgccgcgcgcggcctgccgcaccacgcctccgtcgctggggtgagttctctgtccccattgccttgtttaatgtttattcgtgctgtcttcttgacttagtattcgcagttgaattgtggcgtggacgcatggagttttgtttaggcaggaactttgattgaccgtgcagactgctgagggtggatgtgatcatcttggtgatcgtgtgatttcgtcgatatttttaggatttaccattctccagaatctaattgataaaattccacccgtcagttgatagtgttctagaattggccatctggtcctccggatctggcaccatcgctcattcgttcctccaccaggactcttaagctctcatgctcctctatctatctaatcttctattcttctggcattgaccaagccatgatctggtgcgcgactgcctagactggaactagataagaaattgttgagcgggaacttgagaaattgaagataccttatgaacaaactggatatgttgcaacgaaaagggctagcaactagcaagaatcatgttctctgttcgtgttgtaggatgtcgtcgaagaagacgaggacgaagcgacggagtaacggcttgaggaagaacgcgccagagcacgcggttgtcttgccaccagaaccccatggagagtacctcaaagtgtaatggggccgaggcggcacagccactagacaccaaggacgacgtcgaacccttgtaaggtagggagtagatgtcgatgtcgaaaaacttgtcgtggatgtggacatagagatcgtgtttgcagcccgagcaagaaacatggtcactgttctaacgttgatgtcttggagtggtgtcagctcaagtcccaggcgtcttggagtggtgtcagcttgagtcccaggcggcgagcagcttcgcccgcgatgaaattatgcgtggagcctgagtccacaagggcgacgagtaggggtggcaatttcccccacaggggcgggggaaatttctcacccgtgggtgagcgggcgcggggccctattagtttctggggccggggcagcatcttcacccgcgggaccctggagttttgagcaagagatagcccactagctaagaaaagcccaccaaacaacaaaagcagcccacgtactgccatcacaagtctggatggcaagcccattaagaaataaccttatgcagcccactttagaggagatataagttcaacatcaaaacctaatccatctagcatcaggcatcagttcctggcggcggcaatcgagcgaggctaggaggatgaggcacgcacacgcatcgtctcgtgtcgcgcttcggcttctacccacccgccgttattgccaagccgtcgacgaagcttcaccgaccgcgttatcactcccggctcccatgtctcgttggctgtcgactcctcgcgtctttcccctccatctctaggcgcctccttatcctatctcttctttgagtcgtttcccttcgtcttcaagtccctagcaccattctcttctccctccagcctccaggcgccagcagttgccacttgcatcggggctacgggtacccggccggagttcggggcccaacaggggccggggccggggatcaattttgccccgatcgtcactccaaggctggggccgggtgaacccgtaagtgagcgggggcagggccgttcctgtccaacccgccctgttgccacccctagcgacgaggtggtgtcccttgatgatgatcggcaattgcatcgtgcggctggtgcaaatgctcgagagagcgaggaggaacacctctatcgcctcggtatcttcaggggtaaggacggtggcgttgtcgttaatggacttgacctagaaaatcccctttgcagcacccttgtgactgggtttaaacttctccggatagttgaagcagaagcccttggagcgccgttcattcatctcctctggcgtgaggcacttgaagcgaggcttggcatcggctaccggcggaagggccaacagttacttgtgcgtggaggaagacgacccggtcttgacaggggctggtgttcgtgtagacgtgatcaggtgtggggcaaagcaggtcttgtgctgaggtttgggcgccatgagcgaaacgctcttgtcttggtcctcctgccgctgctcgtaagcccatgccaggctcatggccatctgtagcgagcagggtttctgcatctcaatgttcgtgcgagtggcttaagcaggttggcgatgaaaagcttaactacctgggatgccatcaagggcccggttcacgctaggtgcgagaggagccgacgctagtattcttcgactgtcccagtacagcggaggtgggatagcattcgcgtagtattcttggaacgcaccggtggtccaaaacgaaggttgacgaagttggcgaagcgcgaccacgttaggacgccctcagtgcattgagttggtgataccattcacgtgctgcaccggtcatgtgatatgaggccagccacacctcttcggctcttcttcctccaacatctcctgtccctgaaaaaactgctcagtgattgagccagtttaacgggtcatcttcatcgtcgtgcgtcaaaaaattgagtttgtggtagcatgatgcaccgcggtgaccgcggcgatcgtcgtgatctgccggagatcggtcacgatgctaaggtgggggcgaacgatctccttcctgatatttctccatgcgagcgatgtgttggtcatgccgatcaagcctggtggtgagggaggtgatgtgtccgatcagctggtcgagcttggcttcaacaccgcgtgacgcggcgtttggctcgacgtgctcgccaaacatagcgagagcggcgaatggctatgatgccaagctgataggcgcacggcggcggtggtgttgtagcggcgaatgctcgaaagggatgattgcggagggggtaacagtgatactcacgatcgccctcaggccgaaaatagggctcatccccagccagcgagaggctctgaatgtgtagagaactagattggattgatcttgcttgtttgattacaatgcagtgcccccttttataatcaagggaataactaatcttagagataaaggacaaagcttgagaacctaacaaccgatcctaacaaactgataatgaaaacaaaaaacaatgagtatggtgctagttggcgatgtacggaatatccgcagaatttggcgcagcgtttgcggcgctgttgtgtttcttttgtcaacaacggcgctgataggtacggctgaagaaatgatccatatcgaatacattgatgaggtgcttctgtttttgcatgcatggttttgacctgtcagtaaatgaattgagttccttctgcttgttcccaaggtaagcttgaaatttgaaaagacaatatgacacccaccaggtttatggttttgtgggcgttgttaaaaggtttcgttgtcctacatctcttccatctatttctctacattgttagcaccaacctcctccacattaactcagattcaatgttactctctcactggactattcaatgtcgcccttatgtcagctttgatgccaccgggcaagatatgcaacatgttcactttggacttggtgctttcagattcacctggctccacttggcctggcacctccttatgggttatgatatctagatgtgtggggaatggtcactggttatgtcgcctgcaggtgacctcaccagtggtgcgcacaacaacaatgctcccccgtcttaataagctatgttgtcaagctatggatgcaccactgcagcaaccatgaagtgctccatggatagccaggataagtttgtgtttcagtccaagtcgcttcagcatggagatgcaagcaagccacatgagatcaacctgtttgtgcttaccatcaaaatccacagccaaaccaccattgccttcctcaaattgttgcaacatgctccctccgtctcataaaataccaacctagtactgaatgtgacgcatcttagtacaacgaatctgaatataagatgtgtcacatccagtactaggttggtattttatgagagggagggagtaagtgcatagccaataaccagcaagtgttgttgcagtttccatgggcatagtaaagactactcatttgccttccgttctggttaattcagtgtggattaaaccaatcaatacatttcagtactgaaaagtgaatactcacacgtaagatctgacatgacaggatttgcagtggatctctagtaagcttcatccaggagtggatatttattgagctccatcaagctgtggctccttctgttgtttttctctgttgctgagtggggggatgggagggaaagaacagacgatgaggaagaactaatattgagattcagtaagtaattcagtgagtgctttcttcttttataagaagagtgtcagcttggaagaagaaaatgaaatacgaacaaccgcgctggtcgtaatagatcgacttgaatgcgtcttcttgctccagcattcaagttccatttcaagggaggacgatgtaccatgatactttcagttttgtcgagccctgctttggtctctggtttgatggttgtacgtgctaaaaatccggtacattccgttttgtttcccatcctagtcttttgcgacacagctggtttacttattttgttaggtctcgacttatccgctatgatctccccagtagttcatataggagctattgccgtttcattccgagtggcatgcatatcctagtgatgatgaggcttgatttgacaattcagttttgagtcggcccaaaactgggttgagtgagttgaaaggggtcagatgaaaaatttagtaggttgatgttgtattctaattgaaggttatgttttggacagaggtagttcaagattgatgtggacttgttcctctataacttccttctctatgaggcttgacctccaattttatgtggtacatacaaatttctatttgcaggattgagatatatttatccatattaatattcctgaatttcttgttattcagcaaaacagtggaatttacactgttggtgattttatgactaaaagggaagaactccatgttgtgaagtcaacaacttcagtcgatgaaggttcctttccccctttatgctgtgtgctcttctttctttcattaggaggtaccaacttatcttatatttgagcagcccttgagatgctggtggagcataggataactggctttcctgttattgatgacgagtggaatttggtaagtggtataatattgtatttaaatattgtctttttgaagcacaccactatttacggtgaaccttcatattgagttagctacttgtagaggagggccagatgtcattgcttcaggggattagggtattatattggagagatagcataacttgatatgactgaactcagcaaatagatggaatatatatatttcttgcttgattgataaaagaatattgtccattctttagtgattactcaacttgatattcatatttatatttcacttttcttattaatcacaaattctacgttctaattctcctagatttatgaacacatgttggcgactgctgtttttggaccccttaagccaaggctggccatctgtcacattttgcttctgtacatcagcctacattacttgtctgtccatgtccacacatgattgaacttgggactttttcttggttcgctctttttctgtttctgagtttcacgttcttgccagtcaccactatttttctgtaacatataacatatcaaagtttttgttgataatatgttagttatgttcaacctttaccttttagagcattcgaaagttcaatgtttttcttttacttagcagtattcatacagaaaatgtagacctttagctgcttaatttcctgttatgttgaataaaccttaaactctgaaccaagcatgctttgtcccagttataacatagtgttgctgtgcaatatagtttgtgtaagtgttgcattaatgtgtgccagtatttatttcccatccgcaggttggcgttgtgtcagattatgatctcttagcactcgattcaatatcaggtattcttgtaatagttgatgctggcattcactattacatagttgaaatcgtagttattgggaccagctgatgaactggtgaactgctggttcaaattatattatcttttaaccattttcatgttaaaataatggtttataaggctaaatataaaattataatggctacatagacatcaattcttattccaatcaataaccaggcgttgatccagtggtattgaacgtgtggagattccctagaagccagagcttgtaccatggtcttttagcaaaccaagctggtctaagctctggttctgatttttcccagttggactgccagttccacctggtttaaataactgtgtttcaaatctcatgtagttgcaagttgcaacatcatatggtttggcttcatctagtttacagcatgtttattgaataatcttggaacctgggatcattttggtattgtttatctgtcaaattagcaacagctttcccatgttatgatgctcactgtgtattgttctactgttttaataatcttcttcaggaaatggacttgcggaagtagacatatttcctgaggtggatagtacttggaaggtacttacaaacaaatctatttttaactttgatttcagtttttgtccagctcaagtggaccttttttataaaaaattatagaagttttttaaaagaaattcttgataaaagtaatttttctaggccattgccatgttaagatgatcccctcgaagtcaatctgatactgcaattttactattttagtgaatcacataaccatttggtggctggtctttaccattccatctgtccaagatttggattgttcaactggacaattgtgatgcttggctgaaacataatgtacacactttatgttgatttggaccaagtttcatttatttcttgcatgtacacagtttgcatatccttcagaaaagagtggataggatagtttcacactcagcctgttgtatttttcacagtgaactctcttaaaccatcagacttgagattcttatcttgttcggggtgctagatgtcacttgtttgtgcaacaatatctctttggatgagaagtacacagtagtgtcctggaaccttcattgcagttgatggaatatcactattaacaactaaattagttagaatattgcatcgatgcagataagaatgtggcattttcttcaaacttgcctatcgactatcgtgtatgctttgttccttttatttatatatgtttttttcctactcgtgttcaactgtttctgattttgatgaattgatactctatagacgttcaatgagatacagaagctcttgagcaaaaccaatgggaaagtcattggtgatgttatgacgtctgcacctcttgtggtgcgtgaaactactaaccttgaagatgctgcaaggtattttcagaaaactgcaaacaattctgatatacatcactaacttacttttaaatttctcaaaaaaagggatatcctttattattcaataaaaattatgatgtcatattccacaggttactccttgaaactaagtaccgcaggttacctgtagttgacagttcaggcaaattggtgagtgggcaaaccttatctctttccttttattcttttgcctgagttcagttgttttgagacaaacttatatttggaaggttgggatcataacaagagggaacgtcgtcagggctgcccttaaaattaagaaaaagtttgaaggtgaactttgaatggatactgtggattgaccctttggagacatttaggggcttctacatcggggagatgaacatacggctaggcaattgaattcaagccattgtttcagtggcaagcgaacttcgccaccatgtttataccaggcgtaagttcaataactgccaagtgtaaagtgatggttaaaggactcgtagcagttgaaagggaagctctaattttctactatactagtgccatgctatatcagctcatgggttgtaacggtatctagagacagatgaatggttttatggtatttagttttttttagagtaaatttcataaaactatgggtattttgtataatttatcacaaacatacgggccaatttgatttaaaggaatgccaaaggacttttggaggaataggattccaaaggattttttccct</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0313200, RefSeq:Os08g0313200