Os09g0423000

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Revision as of 07:26, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0423000| Description = Protein kinase-like domain containing protein| Version = NM_001188914.1 GI:297726958 GeneID:9270998| Length = 7879 b...")
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Gene Name

Os09g0423000

Description

Protein kinase-like domain containing protein

Version

NM_001188914.1 GI:297726958 GeneID:9270998

Length

7879 bp

Definition

Oryza sativa Japonica Group Os09g0423000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:15969906..15977784

Sequence Coding Region

15974201..15977063,15977144..15977562

Expression

GEO Profiles:Os09g0423000

Genome Context

<gbrowseImage1> name=NC_008402:15969906..15977784 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:15969906..15977784 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggctttaggggagagggcgagggcgagggctcctcccatggtcgtgcggcgcacggccgtcctcctcctcctcctacatctcgtgttcgtcatcgccgcagcggctgccgcggtggataggcgtcggccagccgaggcgatcgtcggcgggtggcggcagcggcggcggctccaggctctgatgcaggagaaggccacgctgctggccttgaagcggggcctcacgttgctgtcgccgaagctgcttgctgattggaacgactccaacaccgacgtgtgcggcttcaccggcgtcgcctgcgaccggaggcggcagcacgtcgtcggccttcagctctccaacatgagcatcaacggctccatcccgctggcgctcgcccagctgccgcacctccggtacctcgacctgtccgacaaccacatctccggcgccgtcccctcattcctcagcaacctcacgcaactcctgatgctcgacatgtccgagaatcaactctccggcgccatcccgccgtctttcggcaacctcacgcaactccggaagctcgacatatcgaaaaaccagctctccggcgccatcccgccgtccttcggcaacctcacgaacctcgagatccttgatatgtccatcaatgttctcacaggccgaatcccagaagagctctccaacatcggcaagctcgaaggcctcaacctcggccagaacaacctcgtcggcagcataccggcgtcattcacccagctgaagaacttgttctacctcagcctcgagaagaactccttgtcaggttctatccccgccacgatcttcacaaattgcacgcaaatgggtgtattcgacctcggcgacaacaacatcaccggcgagatccccggcgacgcctcggatagcctttccgacaggttcgccgtccttaatctctactccaacagcctcaccgggaggcttccgcggtggctcgccaactgcactattctctacctgctggacgtggagaataactcgctcgccgacgatctgccgacctccatcatctccggcttgcgcaacctcaggtacctgcatttgtcgaacaacgtccatttcgcgagcggcgacggcaacaccaacctggggcccttcttcgccgcggtgtcgaactgcaccagcatactggagatcgaggccggagcactgggcatcggcgggcggctgccgagcttgctcggctcgctgctgccgcctaacatgtcacacctcaacctggagctcaacgccatcgaaggcccgatccccgccgacatcggcgacgtgataaacatcacgctgatgaacctgtcgagcaacctgctcaacgggacgatcccgacgtccatctgctggctgccgaatctgcagcagctcgacctgtcccgcaactcgctcaccggcgccgtgccggcgtgcatcagcaacgccacgagcctcggcgagctggacctgtcgagcaacgcgctgtcggggagcatcccgagcagcatcggcagcctgaagctgtcctacctctccctgcacaggaaccagctgtccggcgagataccggcgagcctcggccagcatctcggcattgtgcggctcgacctctccagcaaccggctgaccggcgagatacctgacgccgtcgccggcattgtccagatgtcgctgaacctctctcgaaacctgctcggcggccggctgccgagggggctcagcaggctgcagatggcggaggtcatcgacctgtcatggaacaatctcaccggcgcgatcttcccggagctcggcgcctgcgccgagctgcaggtcctcgacctgtcgcacaactcgctcaccggcgtcctcccgtcgtcgctcgacggcctcgagagcatcgagcgcctcgacgtctccgacaactccctcaccggcgagatcccgcagaccctgaccaaatgcacgacgctcacctacctcaacctgtcgtacaacgacctcgccggcgtcgtgcccaccgccggcgtcttcgccaacttcacctcgacgtcatacctcggcaacccgcggctctgcggcgccgtgctcgggcgccgctgcgggaggcgacaccggtggtaccagtcccggaagttcctggtcgtgatgtgcatctgcgccgccgtgctggcgttcgtgctgacgatcctctgcgcggtcagcatccggaagatccgggagcggctggcggcggtgcgggaggagttcaggaggggccgacgccgcggcggcggcggctcgtcgccggtgatgaagtacaagttcccgcggatcacgtaccgggagctggtcgaggcgacggaggagttcagcccagaccggctcatcggcacgggcagctacggccgcgtgtaccgcggcacgctgcgcgacggcaccatggtcgccgtgaaggtgctccagctgcagtccgggaactccaccaagagcttcaaccgcgagtgccaggtgctgaagcgcatccgccaccggaacctcatgcggatcgtcacggcgtgcagcctgccggacttcaaggcgctggtgctgccgttcatggcgaacggcagcctcgagcggtgcctctacgcggggccgccggccggcgagctgagcctcgtgcagcgcgtcaacatctgcagcgacatcgccgaggggatggcctacctgcaccaccactccccggtcaaggtcatccactgcgacctcaagcccagcaacgtgctcatcaacgacgacatgaccgctctcgtctccgacttcggcatctcccgcctcgtcatgagcgtcggcggcgtcgccaacgccgccgacgtcggcgcctccaccgccaacatgctctgcggctccatcggatacattcctccagagtacgggtatggctcgaacccgacgacgaagggcgacgtgtacagcttcggcgtgctggtgctggagatggtgacgaggaagaaaccgatcgacgacatgttcgacgcggggctgagcttgcacaagtgggtgaagaaccactaccacggccgggccgacgcggtggtcgacccggctctggcgcgcatggtgcgggaccagacgccggaggtcaggaggatgtccgacgtggccatcggcgagctgctggagctcggcatcctctgcacgcaggagagcgcggccgtgcgcccgaccatgatggacgccgccgacgacctggaccggctcaagcggtacatcggcggtgagaccacggccacgttcgcgtcgtcgctgggcttctcatcctcaacatttgaagatctcgacgactag</cdnaseq>

Protein Sequence

<aaseq>MALGERARARAPPMVVRRTAVLLLLLHLVFVIAAAAAAVDRRRP AEAIVGGWRQRRRLQALMQEKATLLALKRGLTLLSPKLLADWNDSNTDVCGFTGVACD RRRQHVVGLQLSNMSINGSIPLALAQLPHLRYLDLSDNHISGAVPSFLSNLTQLLMLD MSENQLSGAIPPSFGNLTQLRKLDISKNQLSGAIPPSFGNLTNLEILDMSINVLTGRI PEELSNIGKLEGLNLGQNNLVGSIPASFTQLKNLFYLSLEKNSLSGSIPATIFTNCTQ MGVFDLGDNNITGEIPGDASDSLSDRFAVLNLYSNSLTGRLPRWLANCTILYLLDVEN NSLADDLPTSIISGLRNLRYLHLSNNVHFASGDGNTNLGPFFAAVSNCTSILEIEAGA LGIGGRLPSLLGSLLPPNMSHLNLELNAIEGPIPADIGDVINITLMNLSSNLLNGTIP TSICWLPNLQQLDLSRNSLTGAVPACISNATSLGELDLSSNALSGSIPSSIGSLKLSY LSLHRNQLSGEIPASLGQHLGIVRLDLSSNRLTGEIPDAVAGIVQMSLNLSRNLLGGR LPRGLSRLQMAEVIDLSWNNLTGAIFPELGACAELQVLDLSHNSLTGVLPSSLDGLES IERLDVSDNSLTGEIPQTLTKCTTLTYLNLSYNDLAGVVPTAGVFANFTSTSYLGNPR LCGAVLGRRCGRRHRWYQSRKFLVVMCICAAVLAFVLTILCAVSIRKIRERLAAVREE FRRGRRRGGGGSSPVMKYKFPRITYRELVEATEEFSPDRLIGTGSYGRVYRGTLRDGT MVAVKVLQLQSGNSTKSFNRECQVLKRIRHRNLMRIVTACSLPDFKALVLPFMANGSL ERCLYAGPPAGELSLVQRVNICSDIAEGMAYLHHHSPVKVIHCDLKPSNVLINDDMTA LVSDFGISRLVMSVGGVANAADVGASTANMLCGSIGYIPPEYGYGSNPTTKGDVYSFG VLVLEMVTRKKPIDDMFDAGLSLHKWVKNHYHGRADAVVDPALARMVRDQTPEVRRMS DVAIGELLELGILCTQESAAVRPTMMDAADDLDRLKRYIGGETTATFASSLGFSSSTF EDLDD</aaseq>

Gene Sequence

<dnaseqindica>4296..7158#7239..7657#ggtgccgtgtggaccgggagcgcgccgtggcgcggttgaagggagccccaccacacccccttgagttcttgtcgcccactcagcctcccgtcgctgccggcgtggcgcccaccctaggacgcccgccacctgctcgtgcaaatgcgagagccagagccggccacagcggtgctacccgtttacgcgcattgtcgttggggggaagagtgcggtcatgattcgcgtgtgcctccagtaccgtcctgttggcaggctcacagcagagccgctgcggggctccggtctctgtcgtggagtcacggaactgctacttcgtcggatccttcatggagattcaggtaccaacctctcaaatttagctggtttacaactgaaccaaggtgaatttggtgatgattgttcaatgttcagtagatatatgtctgattatcacgtagtagtaggattgtaggagttgtttttcccttcttgaggatcttccccaaccaagtcaaatttctttgcagggaacaaatggtgcaattttcttgttccgaagaagttgacagcacagaaggaaactcacacgcttgtgcatatggatcacttccactataattctataaaggtcagaattagtatttgctaatttatcttgtaggtagttactgataaggctaggaattagctgctttggaaaggtagtggcatgctggcatgcgttctcttgttgcgtaagctcatgggaacagcatgcaactctaaatataaatagcatgcacaatcttcttaagaacaggcatatctttgatggtggaatagtgccagaaatgtgtaaactgaatatcattcttttagttaggaacacaaaagggggcaaatgaaacattctcaactctcaaagagtgccccactagatttggttaaaagggctggcatgatgtacctaacaaatcatttaagaactgtcttagacatgtaggcagatctttctagccacacagtcctgcaatatcacaatgtgctaattattctttgacactttcttgatcacctagatgtcaaaaaaaggagtgagtgtcataggtagagttttctggcccaccgctcgtgcgaagcagcaaaggtcactctcctaggctgaaatttatattccccataaaaatctacaattgcagtgttgcatcataggccaaaccgttgaaaatctgatgtgtgaatcatatgtgaaccttttgaaagctggaattttttgctggacatatataggggcgagtatgcatgtttggcatgatgaatggaccccatgtatataccctgtgaagtcgggtcctgatggcaacaggccagataaatgacgtctccatgagagttcagttagttgaggccagcttatgtgttcttcaggggtatgtctattgctcccaactcccaagttattgccacgcatgcaaaatattacgtgaatggtacttcctccgtttcaggttattagacgttttgactttggtcaaagtcaaattgctttaagtttgatcaagtttgtagaaaaaaatagtaatattttcaaccaaagacaaatttattatgaaaatatatttaattattgatttgatgaaactaatttagtattataaatattactatatttgactataaacttagtcaaacttgaaacagtttgactttgaccaaagtcaaactgagggctaggaaaaaaaatcacataaacccctagaatgacaagaaactgaaataacccagagagatatgactacgtgagataaacagaccatcaataattccgtcctccttttgtattccttgtccttgtgggagggagaagttacttcttctgaattttctcttctttataatgggcctgtttggagaactatcccagggatattttttgggctaaagattatcccaccaaaatagccccctaacaaaatagccctcttgctgtttggatccaaaggctatttagctattattgtaccatcccaatcatttgcctccactaaaagtatacagcagccggatcttctatggctaatccaatacaggcacatacaagcatacacaattccttacaagcacaaacacataatttgtctcaaatatataagcaagtatgtaaaacaatcgtgtcacataaaagatacaattccatacaacaatcgtctcacataaatatacaattacataaaacaattgtctcacataaatattaaaatccatacaacaattgtctcacataaatattaaagtccatacaacaattgtctcacataaatattaaagtccacacaacaattgtctcacataaatatacaagtcctcaaaccgtaaaaaaaaattacaatccattaaacaaagcatttgccaagtcatcgcggaagaaattcatgttgctatcctcaacaagaggttcatcttctggccagttagagtgaggtgatgtaggcattggaaaataatctgcatccgcatccagctccttcctcgccgccaccctggaggaaggcaccgtactcgtggaggtgagggaactcctggcccgacgccgcctgggtgttgaggtccagcgtgtccacgccggcgcggggaacggatccgtgggaagggccggacgccgacggctgcgacgaccaaatgttgccggcggcggacgaaatgggatcttgggagaagaaatcgaagccgttggggtccatctccgcgcggatccggtgcaaggcgatgcgtcgacgacggatctgatggccggcaacgcgggtggggtgagtcgccggcgtggatgcctctcggtggatctgaaggaagggcggcgcgattcgagggagagggcggtgcgggtgaagggccgggcggcggcgcgggtggggggagggggaggcgaagctggggccgggcggcggcgcgggtggggggagggggaggcgaagctggggccgggcggcggcgcgggtggggggagggggaggcgaagctgggccgggcggcggcgagggttctggagagcgagcgagggcgagagcgaggggtgagagcgacgatttctgccgcaactggatccggcacaagtgggggaaagtgggaatcggtggggcccacagcaaatagccccaattagcacccctgggggtgataattttttggggtgggctatttgcaaatggccctaaaatagctctcatgtttggatccccttgagctattttaaggctaaaaggggtgggctaaaaaaaatccataggatccaaacacccccaatgttttggtttaggcccaaagcctcaaattagctaggccatctaactggattatgctagcttaaacagttttatcaacagagatctacctggtccaaacttgcttcttatctagccagattagcctcgcaactgaacacactaaatcaatttttgcatgttgcttaacaggctccagttttggtttttatcgttttaatcacttccctgttgagaacactgtatggaatggaaaccaagttgattctgtccatgcatcctgcaggctgcctggcaaacaccacacaccactcaccggtgcaacccgcaagtgcagccgtgtgcaggtggaagacgaacagtattaggggagcttaagattttgaaaatcagttggtgagaagctcacgggtgagaatctggagactttaattcattttttgaattctaaaactataacttctcaaaatcagagtgaaaatttggactgtttggggaaagcttttggtatctgcagattccagaaaaatctctagctgcgagaagctctcccaaacaggctcaaaacccgcagttagctagcgtgcgccaagcccctcctacattccggtgcgcgcgcgccagcgcccggagcccaccgcgagtcgtcgaatgtgcgcagagccccgtccctttcgtccgatccctcggcgacttgcttccccggccggcagcctactcatcatgcacgaacccatcgccccaaaaaagagccgcgcatcgtgcgcagcataatcatagctatcgctgaaacgcctgcaccttcccctcctcctccattcgcttacctcgccattgacatcgcatcagctcttctccatctgtatctgtccgtttttctttcatccatctccgtcttttcgtgcaactctccagcttcagcttcagtgccttctctctaccaagtacgtgaagaagagcttcatctatgcctctactagatcagagatgctagctagcgctctagctagctgctagcaaggagcgcaccagcaagggcaccaccactggcttaagtacatggctttaggggagagggcgagggcgagggctcctcccatggtcgtgcggcgcacggccgtcctcctcctcctcctacatctcgtgttcgtcatcgccgcagcggctgccgcggtggataggcgtcggccagccgaggcgatcgtcggcgggtggcggcagcggcggcggctccaggctctgatgcaggagaaggccacgctgctggccttgaagcggggcctcacgttgctgtcgccgaagctgcttgctgattggaacgactccaacaccgacgtgtgcggcttcaccggcgtcgcctgcgaccggaggcggcagcacgtcgtcggccttcagctctccaacatgagcatcaacggctccatcccgctggcgctcgcccagctgccgcacctccggtacctcgacctgtccgacaaccacatctccggcgccgtcccctcattcctcagcaacctcacgcaactcctgatgctcgacatgtccgagaatcaactctccggcgccatcccgccgtctttcggcaacctcacgcaactccggaagctcgacatatcgaaaaaccagctctccggcgccatcccgccgtccttcggcaacctcacgaacctcgagatccttgatatgtccatcaatgttctcacaggccgaatcccagaagagctctccaacatcggcaagctcgaaggcctcaacctcggccagaacaacctcgtcggcagcataccggcgtcattcacccagctgaagaacttgttctacctcagcctcgagaagaactccttgtcaggttctatccccgccacgatcttcacaaattgcacgcaaatgggtgtattcgacctcggcgacaacaacatcaccggcgagatccccggcgacgcctcggatagcctttccgacaggttcgccgtccttaatctctactccaacagcctcaccgggaggcttccgcggtggctcgccaactgcactattctctacctgctggacgtggagaataactcgctcgccgacgatctgccgacctccatcatctccggcttgcgcaacctcaggtacctgcatttgtcgaacaacgtccatttcgcgagcggcgacggcaacaccaacctggggcccttcttcgccgcggtgtcgaactgcaccagcatactggagatcgaggccggagcactgggcatcggcgggcggctgccgagcttgctcggctcgctgctgccgcctaacatgtcacacctcaacctggagctcaacgccatcgaaggcccgatccccgccgacatcggcgacgtgataaacatcacgctgatgaacctgtcgagcaacctgctcaacgggacgatcccgacgtccatctgctggctgccgaatctgcagcagctcgacctgtcccgcaactcgctcaccggcgccgtgccggcgtgcatcagcaacgccacgagcctcggcgagctggacctgtcgagcaacgcgctgtcggggagcatcccgagcagcatcggcagcctgaagctgtcctacctctccctgcacaggaaccagctgtccggcgagataccggcgagcctcggccagcatctcggcattgtgcggctcgacctctccagcaaccggctgaccggcgagatacctgacgccgtcgccggcattgtccagatgtcgctgaacctctctcgaaacctgctcggcggccggctgccgagggggctcagcaggctgcagatggcggaggtcatcgacctgtcatggaacaatctcaccggcgcgatcttcccggagctcggcgcctgcgccgagctgcaggtcctcgacctgtcgcacaactcgctcaccggcgtcctcccgtcgtcgctcgacggcctcgagagcatcgagcgcctcgacgtctccgacaactccctcaccggcgagatcccgcagaccctgaccaaatgcacgacgctcacctacctcaacctgtcgtacaacgacctcgccggcgtcgtgcccaccgccggcgtcttcgccaacttcacctcgacgtcatacctcggcaacccgcggctctgcggcgccgtgctcgggcgccgctgcgggaggcgacaccggtggtaccagtcccggaagttcctggtcgtgatgtgcatctgcgccgccgtgctggcgttcgtgctgacgatcctctgcgcggtcagcatccggaagatccgggagcggctggcggcggtgcgggaggagttcaggaggggccgacgccgcggcggcggcggctcgtcgccggtgatgaagtacaagttcccgcggatcacgtaccgggagctggtcgaggcgacggaggagttcagcccagaccggctcatcggcacgggcagctacggccgcgtgtaccgcggcacgctgcgcgacggcaccatggtcgccgtgaaggtgctccagctgcagtccgggaactccaccaagagcttcaaccgcgagtgccaggtgctgaagcgcatccgccaccggaacctcatgcggatcgtcacggcgtgcagcctgccggacttcaaggcgctggtgctgccgttcatggcgaacggcagcctcgagcggtgcctctacgcggggccgccggccggcgagctgagcctcgtgcagcgcgtcaacatctgcagcgacatcgccgaggggatggcctacctgcaccaccactccccggtcaaggtcatccactgcgacctcaagcccagcaacgtgctcatcaacgacgacatgaccgctctcgtctccgacttcggcatctcccgcctcgtcatgagcgtcggcggcgtcgccaacgccgccgacgtcggcgcctccaccgccaacatgctctgcggctccatcggatacattcctccaggtaaattaaccatcatcatcaagcaaactcatcatcatttttctcgtgacaaattctaattaatcgattcgattctgaagagtacgggtatggctcgaacccgacgacgaagggcgacgtgtacagcttcggcgtgctggtgctggagatggtgacgaggaagaaaccgatcgacgacatgttcgacgcggggctgagcttgcacaagtgggtgaagaaccactaccacggccgggccgacgcggtggtcgacccggctctggcgcgcatggtgcgggaccagacgccggaggtcaggaggatgtccgacgtggccatcggcgagctgctggagctcggcatcctctgcacgcaggagagcgcggccgtgcgcccgaccatgatggacgccgccgacgacctggaccggctcaagcggtacatcggcggtgagaccacggccacgttcgcgtcgtcgctgggcttctcatcctcaacatttgaagatctcgacgactagcagcaggcagcagcatctcctaaggacgcatatgaatcatgcatgatgtgtaaatagctaggaatttagctaagaggcaggaagattatttgtcaggaaattaaagaagtgtgcaatttgtgcagaaatattgcgagatttataggattctttggaagtatctgattaaattttgatggagtgatatcttcggttatagatatcgataaatacattaatccc</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0423000, RefSeq:Os09g0423000