Os08g0320200

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Revision as of 12:56, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0320200| Description = Tetrapeptide transporter, OPT1/isp4 family protein| Version = NM_001188589.1 GI:297726308 GeneID:9269293| Length = 4...")
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Gene Name

Os08g0320200

Description

Tetrapeptide transporter, OPT1/isp4 family protein

Version

NM_001188589.1 GI:297726308 GeneID:9269293

Length

4473 bp

Definition

Oryza sativa Japonica Group Os08g0320200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:14025598..14030070

Sequence Coding Region

14025683..14026492,14026595..14026873,14026998..14027571,14027729..14027826,14027925..14028365

Expression

GEO Profiles:Os08g0320200

Genome Context

<gbrowseImage1> name=NC_008401:14025598..14030070 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:14025598..14030070 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaggaggaggtgaacgaccacccgatcgaggaggtccggaacacggtgccggtgaccgacgacccgtcggagccgtgcctgacgttccgggtgtgggtgctggggctctcgtcgtgcgtgttcctcgccttcgtcaacgagttcttcatgtaccggaccacgcagctgagcatcggcacggtggtggtgcaaatcatcacgctgcccatcggccgcctcatggcgtcgacgctgccggcgaggcgcctccgcgtcggcggctggtccttctccctcaacccggggcccttcagcctcaaggagcattgcctcatcatcatcttcgccggcgccggcgccagcggcgtctatgccatgaacatcatcgccatcgtcaaggtgttctacaagcgccagatcagcccctacgccgccatgctgctcgcccagaccacccagttgcttgggtatggatgggccggattgttcaggaagtacctggttgactcagcctacatgtggtggccgtcaaacctcgtccaagtcaccctcttcagggcgatgcacgaggaggagaagaggaacaaggggcagctgacgcggctgcagttcttcatcatggtgatgacgtgcagcttcgcctactatatcgtacccagctacctgttcccggcgatcagcaccatctcggtgctgtgctggctgtacagggactcggtgacggcgcagcagatcggctccggcgcctcgggcctcggcgtcggctccttcggcctcgactggaacaccgtggtgggcttcctcggcaacccgctggcgtcgccggcgttcgccatcttcaacgtcatggccggcttcgcgctcagcacctacgtcgccgtgccgatcctctactggaccgacacctacaacgccaagcgcttcccgctcgtgtcgtcgcacgtcttcaacgccgccggcggccgctacgacaccgcccgcatcctcgacccggccaccttcacgctcaacctcagggagtacgacgcctacggccgcatcaacctcagcatcctcttcgccatcaactacggcatcggcttcgcgggcctcatgtccacgctctcccacgtcgcgctctaccacggcaaggacatttggggcttgtggcggaaggcaacggcggagcaggcgaacggcggcggcaaggagcgccaagacgtgcacacgagaatcatgaagaggaactacaaggccgtgccacagtggtggtttcacttgatgctggccatcgtgatggcattgtcgctgtacacctgtgaggggtttggccggcagcttcagctgccatactggggtctcctccttgcctgtgccatcgccttcaccttcacgttgcccatcggcgtcatctctgccacgaccaacatgcaaccagggttaaacatcatcacagagctcatcatcgggtacctgtacccggggaagccattggcgaatgtggtgttcaagacctacggctacataagcatgactcaggcgctgacgtttgtgtcggatttcaagctggggcactacatgaagataccgcccaggtccatgttcatggtgcagctggcagggacggtggtggcgtcgacggtgcacttcgcgacggcgtggtggctgctgacgacggtgaggaacatctgcgacgtggacagcctgccgctggggagcccgtggacgtgccccggcgaggacgtcttctacaacgcctccatcatctggggcgtcgtcggaccgctccggatgtttggccgtctcggcaactactggcagatgaactacttcttcctcgtcggcgtcctcgcgccggtgcccgtctggctgctgtcgcgccggtacccgcgcagcgcgttgctccgggacatcaacctgccgctcgtcctcgccggcgccagcgggctgctcccggcgaggtccgtcaacttcgtcatgtgggggctcgtcgggttcgtgttcaaccacgtcgtgtaccgccggtgcagggcgtggtggatgcggcataactacgtgctcgccgcggggctcgacgccggcgtcgccttcatgggcgtgctcaccttcgtctcgctaggatacttcgacatatacggggtgcagtggtggggtggcgccgccgatgatcactgccccttggcgtcgtgccccacagcacctggggtgtttgccaggggatgcccgcctgtaccttcttga</cdnaseq>

Protein Sequence

<aaseq>MEEEVNDHPIEEVRNTVPVTDDPSEPCLTFRVWVLGLSSCVFLA FVNEFFMYRTTQLSIGTVVVQIITLPIGRLMASTLPARRLRVGGWSFSLNPGPFSLKE HCLIIIFAGAGASGVYAMNIIAIVKVFYKRQISPYAAMLLAQTTQLLGYGWAGLFRKY LVDSAYMWWPSNLVQVTLFRAMHEEEKRNKGQLTRLQFFIMVMTCSFAYYIVPSYLFP AISTISVLCWLYRDSVTAQQIGSGASGLGVGSFGLDWNTVVGFLGNPLASPAFAIFNV MAGFALSTYVAVPILYWTDTYNAKRFPLVSSHVFNAAGGRYDTARILDPATFTLNLRE YDAYGRINLSILFAINYGIGFAGLMSTLSHVALYHGKDIWGLWRKATAEQANGGGKER QDVHTRIMKRNYKAVPQWWFHLMLAIVMALSLYTCEGFGRQLQLPYWGLLLACAIAFT FTLPIGVISATTNMQPGLNIITELIIGYLYPGKPLANVVFKTYGYISMTQALTFVSDF KLGHYMKIPPRSMFMVQLAGTVVASTVHFATAWWLLTTVRNICDVDSLPLGSPWTCPG EDVFYNASIIWGVVGPLRMFGRLGNYWQMNYFFLVGVLAPVPVWLLSRRYPRSALLRD INLPLVLAGASGLLPARSVNFVMWGLVGFVFNHVVYRRCRAWWMRHNYVLAAGLDAGV AFMGVLTFVSLGYFDIYGVQWWGGAADDHCPLASCPTAPGVFARGCPPVPS</aaseq>

Gene Sequence

<dnaseqindica>3579..4388#3198..3476#2500..3073#2245..2342#1706..2146#aggggagaaacaagcctacagatgatggctcggtctatcccgccggagtccggtgacgagaacgtctcggcttctgccgatggtgtgtatgcctccttgttcattctctgcatgaattgcctttcctacactgggaatgcaaatgaaattctctcgtggtagaagatcgaaattaagctactagctagtttctcttggagaatgaaatcaacaacagttttcttccacttcccatttgttcgtgcaaaattgctgctaaaatatttaacgattttactcatgtttctttttttttccccaatggaatctgaacggctcagtgttgctttgctaaaaacatgagggtttgagaacttctctcgcaaagacatgcaggcggcctattttagggacagaagatgacaaaagaacatcaaggaagagggcgtacgtgtagagaaagacggtgaaatattttgccagccagccggccggccggagtccgacgatcgagcacattccgatggacactgcaggcggtacaacaaaccacgcctaaaacctcctttacttgtaagtcatcgtcgcaaagttctaccacaaacaagtgaaacgcattgatcgtcaatttcgtaaaaacacttcaaatgcatagatcataagctttcaaatctcggttgcatatcgtttgctggttagtttgttagccatagtcaagatttgaattttgaaactttacttgggagttctttttcatcgtaatctatttttagcattagcttttaaactgcaaacaaatagatataaaaagttgtgattagttcattttggaatttgggattatttcattcaattttgggtcattagaggaaacacttttaatcatttagatggacatccacccatttgttgcctgtcaaattaaatgattatgatttttttttaaaaaaatggataagatatattaatacttcctctatttcacaatgataagatatattagggtgccatcatttggcatattggtggaataagctaaacggtatatttgcaaatgaaaagtaatttgtgaataaaatttttatatatgtgttattagcgatctaaaagcaaaggctgaaaaataaccttcaatgaaaaaaccctaaaatcagcttcaaatttaatattgaaaattcaaattttggctgataagcatatgaatatgccaaacgatggagacctaatacgttccgttccacaatgaatctagacatatagcattgcctacattcatatagatataaagaatctagacacatatttgtctagattcattagagtatctatatgaatgtgaacagtgctagaaaagtcttacaatatgaaatagggggagtacataatatgtcacttcataaacatacaagtttaaatttgacttctatgagttctaacaaaaacataaaaaattaactctaattagtatacgtatatactcacagttaaatttgtttttcttacaactcgtaaaagttaaatttgaacttgtttgtttaagtgaatattcatattaatctatcttatcttgtcaattgttttgatttattattttgtaattatctagttgacatgtaataaatatatgaacatatccaaccgaatgattaaaagccctctccgggttatcagccataatcactatcagagttttgtgtgtgtgtgtgtgcgcactgcagaggagggcatggaggaggaggtgaacgaccacccgatcgaggaggtccggaacacggtgccggtgaccgacgacccgtcggagccgtgcctgacgttccgggtgtgggtgctggggctctcgtcgtgcgtgttcctcgccttcgtcaacgagttcttcatgtaccggaccacgcagctgagcatcggcacggtggtggtgcaaatcatcacgctgcccatcggccgcctcatggcgtcgacgctgccggcgaggcgcctccgcgtcggcggctggtccttctccctcaacccggggcccttcagcctcaaggagcattgcctcatcatcatcttcgccggcgccggcgccagcggcgtctatgccatgaacatcatcgccatcgtcaaggtgttctacaagcgccagatcagcccctacgccgccatgctgctcgcccagaccacccaggttgccactcatgcattggttgattagtaacaaatcgaagacctgatcaaacacacattgattaatccaaaaatggccttttatttgatttcatacagttgcttgggtatggatgggccggattgttcaggaagtacctggttgactcagcctacatgtggtggccgtcaaacctcgtccaagtcaccctcttcaggtaatggtactaattaccagcagttattttgtcgaaatatttgtttctgaaaaatatatgatgcaaatggggaatgggcaaacacaaactttattttgagcattttttttttttgcggggaaacttataagcaaaatttggaatgtttgtcacgcagggcgatgcacgaggaggagaagaggaacaaggggcagctgacgcggctgcagttcttcatcatggtgatgacgtgcagcttcgcctactatatcgtacccagctacctgttcccggcgatcagcaccatctcggtgctgtgctggctgtacagggactcggtgacggcgcagcagatcggctccggcgcctcgggcctcggcgtcggctccttcggcctcgactggaacaccgtggtgggcttcctcggcaacccgctggcgtcgccggcgttcgccatcttcaacgtcatggccggcttcgcgctcagcacctacgtcgccgtgccgatcctctactggaccgacacctacaacgccaagcgcttcccgctcgtgtcgtcgcacgtcttcaacgccgccggcggccgctacgacaccgcccgcatcctcgacccggccaccttcacgctcaacctcagggagtacgacgcctacggccgcatcaacctcagcatcctcttcgccatcaactacggcatcggcttcgcgggcctcatgtccacgctctcccacgtcgcgctctaccacggcaagcaagttttcccgcacaagctcttgctaacttagtactcccgtcagtcataaatatttgatatgtttatgacaagattcagctaaccagcttgcaaaacttttgacttcaatttgttcgagcagggacatttggggcttgtggcggaaggcaacggcggagcaggcgaacggcggcggcaaggagcgccaagacgtgcacacgagaatcatgaagaggaactacaaggccgtgccacagtggtggtttcacttgatgctggccatcgtgatggcattgtcgctgtacacctgtgaggggtttggccggcagcttcagctgccatactggggtctcctccttgcctgtgccatcgccttcaccttcacgttgcccatcggcgtcatctctgccacgaccaacatggtcagcacaagtagaattactttctctttcagccttgaattaacgttaactaagctagtatagtagtaaattgcattattgttggttggttgtttctttcagcaaccagggttaaacatcatcacagagctcatcatcgggtacctgtacccggggaagccattggcgaatgtggtgttcaagacctacggctacataagcatgactcaggcgctgacgtttgtgtcggatttcaagctggggcactacatgaagataccgcccaggtccatgttcatggtgcagctggcagggacggtggtggcgtcgacggtgcacttcgcgacggcgtggtggctgctgacgacggtgaggaacatctgcgacgtggacagcctgccgctggggagcccgtggacgtgccccggcgaggacgtcttctacaacgcctccatcatctggggcgtcgtcggaccgctccggatgtttggccgtctcggcaactactggcagatgaactacttcttcctcgtcggcgtcctcgcgccggtgcccgtctggctgctgtcgcgccggtacccgcgcagcgcgttgctccgggacatcaacctgccgctcgtcctcgccggcgccagcgggctgctcccggcgaggtccgtcaacttcgtcatgtgggggctcgtcgggttcgtgttcaaccacgtcgtgtaccgccggtgcagggcgtggtggatgcggcataactacgtgctcgccgcggggctcgacgccggcgtcgccttcatgggcgtgctcaccttcgtctcgctaggatacttcgacatatacggggtgcagtggtggggtggcgccgccgatgatcactgccccttggcgtcgtgccccacagcacctggggtgtttgccaggggatgcccgcctgtaccttcttgattgatcaggacaccgcatctacatgtatatactccatatgacagatggttactcaaatgtatatattatatcctcttgtcttcct</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0320200, RefSeq:Os08g0320200