Os09g0120100

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Revision as of 07:17, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0120100| Description = Conserved hypothetical protein| Version = NM_001069129.1 GI:115477997 GeneID:4346420| Length = 2898 bp| Definition ...")
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Gene Name

Os09g0120100

Description

Conserved hypothetical protein

Version

NM_001069129.1 GI:115477997 GeneID:4346420

Length

2898 bp

Definition

Oryza sativa Japonica Group Os09g0120100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:1493177..1496074

Sequence Coding Region

1493177..1493453,1494961..1495175,1495490..1496074

Expression

GEO Profiles:Os09g0120100

Genome Context

<gbrowseImage1> name=NC_008402:1493177..1496074 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:1493177..1496074 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggagcagcaagaggacagctttgatcttccattgtttgtggaggaggaagatgaagcaggagcggcggcgaagcagaggcggcgggagcagagccagaagccccggcggcctcgggcgccgtcgtttctggacacgccggaggtgaaggagaggcgggcgaggagcagtgctttggcggccaagtattgggagcacgaccccaagacaggaatcagctactacacccgcgcctgcttccgcgacctcaccaccttcgacctcgacaaggagacgcaatatggtccaatgcgctttacggattcaattatcaacaaggaccacatgttgactagctcgttgaatgtactttctctgaaggtaaaatcatcagatgttggttatcctatcaatctatatgggactgtgatagtcagagatggattagattttaactgcatcttcatcttccggcgcaatagggacaattgccaagttatccagtcagagaatgaaaatataattctcacgggcccaactagaggaattgttttccatggtgaaatcttttttgagataaatttgaagattaaggaaaatgaagagtgcaatgacaaagaatttagtaaaggattgcttgagatgaaggtttacactcgtaagtctatgattgtgagtgaaaccttggagagtaggctcagtgaggtggagcttgtatctgcttctgttaaggaagccttggagggcactgtcgagatcaatattctgtcagggcctgaagtttttcatggaaaaattactgcttgcacaacagatgttccaaatgatattatactgtatgatagtgatgttgatgatgcaactacagtgggtgatgacagagttatgcaactgctgcgacgtgttgtagtagtatcagtaaatgagatgttgatactgaatattgacgcccataatattcatccgaatgataatttatccagtcgcactttgaggttcactccatttactagagggttggatgaggaggtgatcagctgtggtctttacaagatgcgggtgaaagttgtttggtcaaccttgatgatggattag</cdnaseq>

Protein Sequence

<aaseq>MAEQQEDSFDLPLFVEEEDEAGAAAKQRRREQSQKPRRPRAPSF LDTPEVKERRARSSALAAKYWEHDPKTGISYYTRACFRDLTTFDLDKETQYGPMRFTD SIINKDHMLTSSLNVLSLKVKSSDVGYPINLYGTVIVRDGLDFNCIFIFRRNRDNCQV IQSENENIILTGPTRGIVFHGEIFFEINLKIKENEECNDKEFSKGLLEMKVYTRKSMI VSETLESRLSEVELVSASVKEALEGTVEINILSGPEVFHGKITACTTDVPNDIILYDS DVDDATTVGDDRVMQLLRRVVVVSVNEMLILNIDAHNIHPNDNLSSRTLRFTPFTRGL DEEVISCGLYKMRVKVVWSTLMMD</aaseq>

Gene Sequence

<dnaseqindica>1..277#1785..1999#2314..2898#atggcggagcagcaagaggacagctttgatcttccattgtttgtggaggaggaagatgaagcaggagcggcggcgaagcagaggcggcgggagcagagccagaagccccggcggcctcgggcgccgtcgtttctggacacgccggaggtgaaggagaggcgggcgaggagcagtgctttggcggccaagtattgggagcacgaccccaagacaggaatcagctactacacccgcgcctgcttccgcgacctcaccaccttcgacctcgacaaggagagtatgtatacacctcaacaatagtacctaataacacattacttctaagactgtggatgaggatgagcattctatatttattcaaattctagtctatatttattcaaattctagtctatatttattcaaattctagtaaaaggtactccctatgtgggctactgatctgtcgccatcaaattgttcgcagctctgaaccatgtaattgcgaaatccaatcaaacatgcagagtgaatggcaggccaataattttaagtacaaaacaatgcaacaacaagcacagaaacagtggcattcattaagtgataaacattttgttcaacaatcaaagattagacaaatatacccttatcattcaaaccctatcatgtctctgtttgcttgggagctgttgttagtggcattaagattaactagatggaatcctcactaactggggaaatttgattgttccactcttcacagtggttcttaatcgtttccagctccttatatttcaattgatcacttgccactctgcccacaatgcagttgactatttgccacttctggtctgaaatggccatctatccccattcttcctccccttcacctcacctcccatgcagcaatggtgacagtgagcttaaactgcaatggtgactgagaagaaggaatttgattcggtggcacaatttcaccattttcggcttcggtagtcagtggtagtaccaccaccagcagccatggaccaatccacctgctcatttctaggggccttcttttcacagtgattgcgaataagcagtgaattgtatttttccttgaggaccttgcactggagggcctagacgctggtagtgagctctagatgcaggtgcagaggcctgaaatgttgagtgctcgatccagggtggaggatgaggaggaacatcacggtgctgttgtctgcccacgcatgctacagctagggacactatgtcagggatgatggggaatactgggaagagatgttgtagtttgccacaggtggatgagatgagatgcaaatgatcaattttcttgattggagggcaggtcaaagtcaaacacagttaagctgttatatgatgaattagaaagctcatactgtttaggctttgctaagataagcagggattggaaaggatttagttcagtttcctgaccaatatcagaatttaacttgcatgctgtatgctattgaacatattctctctctctctctctctctcagcccatagatctcattgagcaaatggacagttatatggttggaatttgctcaacaatggttgattaagattagaaatggccaaatactctctcaactacaataatttgatttctgaaacagctaaaataattttcactacggttgatatatatgcagacgtatgtcctctagagacttttgaactctagagtctagagacattatctagtgtatacttctgtcgacatactattcttccctgttgcaaactaactccattttcgtttttctcagcgcaatatggtccaatgcgctttacggattcaattatcaacaaggaccacatgttgactagctcgttgaatgtactttctctgaaggtaaaatcatcagatgttggttatcctatcaatctatatgggactgtgatagtcagagatggattagattttaactgcatcttcatcttccggcgcaatagggacaattgccaagttatccagtcagaggtattgctaagttctcttaaacactaccaattttccctatttcacatgatacattgaactaatttctttacagttctgtacagttaaaggcataccaaagctagctacatttaagttgtctatatgcatccacagtacccctagtttcatatgaaataccagtacttatttttagtgggcttaaatataactaggtaatattatgagccatgtcatttaaataataacattatattctatggataatgtcatcacctatttatatatatagcattagtgtgactagctaacttcttgtgtaatttttcttgtagaatgaaaatataattctcacgggcccaactagaggaattgttttccatggtgaaatcttttttgagataaatttgaagattaaggaaaatgaagagtgcaatgacaaagaatttagtaaaggattgcttgagatgaaggtttacactcgtaagtctatgattgtgagtgaaaccttggagagtaggctcagtgaggtggagcttgtatctgcttctgttaaggaagccttggagggcactgtcgagatcaatattctgtcagggcctgaagtttttcatggaaaaattactgcttgcacaacagatgttccaaatgatattatactgtatgatagtgatgttgatgatgcaactacagtgggtgatgacagagttatgcaactgctgcgacgtgttgtagtagtatcagtaaatgagatgttgatactgaatattgacgcccataatattcatccgaatgataatttatccagtcgcactttgaggttcactccatttactagagggttggatgaggaggtgatcagctgtggtctttacaagatgcgggtgaaagttgtttggtcaaccttgatgatggattag</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0120100, RefSeq:Os09g0120100