Os08g0321000

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Revision as of 12:56, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0321000| Description = Beta-Ig-H3/fasciclin domain containing protein| Version = NM_001068067.1 GI:115475871 GeneID:4345261| Length = 2996 ...")
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Gene Name

Os08g0321000

Description

Beta-Ig-H3/fasciclin domain containing protein

Version

NM_001068067.1 GI:115475871 GeneID:4345261

Length

2996 bp

Definition

Oryza sativa Japonica Group Os08g0321000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:14073131..14076126

Sequence Coding Region

14073441..14074340,14075579..14075926

Expression

GEO Profiles:Os08g0321000

Genome Context

<gbrowseImage1> name=NC_008401:14073131..14076126 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:14073131..14076126 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagctgctgctgcggcggctggcggtggtggtggcggtggtggcgttgacggcggcgacggcggcggaggggtacaacatcaccaagatcctcggggaccacccggagtactcgcagttcaacaagctgctgacagagacgcggctggccggcgacatcaaccgccgccgcaccatcacggtgctggtggtggccaacggcgacatgggcgcgctctccggcggccactacaccctccccacgctccgccacatcctcgagatgcacatcctcgtcgactactacggcgccaagaagctccaccagctcgcccgcggcgacaccgcctcctcctccatgttccaggagtccgggtcggcccccggcacgacggggtacgtgaacatcacgcagcaccgcggcgggcgcgtgtcgttcacggcggaggacgcggcggacagcgcgacgccgtcgagcttcgtcaagtccgtgaaggagatcccctacgacctcgccgtgctccagatcagcaagccgctgtcctcccctgaggcggaggcgcccgtggccccgccggcgccggtgaacctcaccgagctcctgtccaagaagtactgcaagaacttcgccggcctcctcgcctcgaacgccgacgtgtacagcaacatcaacgcgaccaaggacaacgggctcacgctcttctgccccgtggacgccgccgtcgacgccttcctgcccaagtacaagaacctgacggccaaggggaaggcggccatcctcctctaccacgccgtgccggactactactcgctccagctgctcaagtccaacagcggcaaggtcagcacgctcgccaccgccagcgtcgccaagaaggactacagctacgacgtctccaacgaccgcgacagcgtcctgctcgacaccaaggtcaactcggcctccgtcaccgccaccgtcaaggacgccgacccgctcgccgtctacgccatctccaagttcctgcagcccaaggagctcttcaaggtcaccgaggacctggcaccggcgcccgcgccggagggccccaagaagaagaccaagaagaagaagccgtccaccacctccgccgctgccgccccctccgacgactcctccgccgccgactcgcccgacggcacccccgcggacgacgtcgcggacaaggccgccgccgcgccgtccgtgctcgccaggtgggttaccgccgccgccacggtcgccgcggcgttggcgttggcagcttga</cdnaseq>

Protein Sequence

<aaseq>MELLLRRLAVVVAVVALTAATAAEGYNITKILGDHPEYSQFNKL LTETRLAGDINRRRTITVLVVANGDMGALSGGHYTLPTLRHILEMHILVDYYGAKKLH QLARGDTASSSMFQESGSAPGTTGYVNITQHRGGRVSFTAEDAADSATPSSFVKSVKE IPYDLAVLQISKPLSSPEAEAPVAPPAPVNLTELLSKKYCKNFAGLLASNADVYSNIN ATKDNGLTLFCPVDAAVDAFLPKYKNLTAKGKAAILLYHAVPDYYSLQLLKSNSGKVS TLATASVAKKDYSYDVSNDRDSVLLDTKVNSASVTATVKDADPLAVYAISKFLQPKEL FKVTEDLAPAPAPEGPKKKTKKKKPSTTSAAAAPSDDSSAADSPDGTPADDVADKAAA APSVLARWVTAAATVAAALALAA</aaseq>

Gene Sequence

<dnaseqindica>1787..2686#201..548#actacaactacaacaactacatagagccaggcaggccaagctgagctgcggcgccccaccaccatacctctccgactccgcgcgagcatcgccaccagcccaccaccgcaccagtagtagtgagtgctcagtgcgttccactccactccgagctaagcagcgaacagctcgccgccgacgctctctctctctctgtagatatggagctgctgctgcggcggctggcggtggtggtggcggtggtggcgttgacggcggcgacggcggcggaggggtacaacatcaccaagatcctcggggaccacccggagtactcgcagttcaacaagctgctgacagagacgcggctggccggcgacatcaaccgccgccgcaccatcacggtgctggtggtggccaacggcgacatgggcgcgctctccggcggccactacaccctccccacgctccgccacatcctcgagatgcacatcctcgtcgactactacggcgccaagaagctccaccagctcgcccgcggcgacaccgcctcctcctccatgttccaggtcagggtcacctgcctctttccgtttcctatcctaatccttgccggacttatattttcctactgtagtagatctgcatgcctcgctactcagcttcagctctcaacctcactttcatcgttgatggtttttcttttcatataaaagaaattatatacacctcaagttggaattatatgcctataattacgggttgaaatgggaagtgcctttttcttcttggtgttccggacctctgcataattgttcgtaataattgcatgccaacacactgaacacaggcactgccaaagtaggtgggtctcggataggatagtgaagcttccattgcagggaaaaaaaaaactttactactttttacctgattacttttcctttttaaaaaagcaaaaaagcaaactagagtatatatcctccatcgaaaaatcagtaactagtaaattcacgctagtaatgagagctcaattcatttcaaaatgcgtcgctttcgaagggaggccccagttaagtgagtgagtgcacatgcatatgtctgccacggcctactttctcagttggcaaaaaaataaataaataacactaataataattgctgactgtgcgattatgtgttgttgtccacacagttatgtatgcttggtcgttgatgtaaacttgtgtcggtggctcggtgcctcttttatctgctctaaattgaaaattttggactgttttgagaaaaaaaaaatagttatggaatccctcgatttctgggtcatttgaaattcccaaggcaagatctcggcgagtttaaaaattctataccttcatctaaactttggattcacatcacgtttagggggactcatgtagtaccataaacccaatttgccccacgcgaagaaattaaaaaacaaatgccaatttgctattttgtatatactcgtatggtcaacaaaccctctctgtttctgttttcttttttgtgggaagtgtactatttgattagctgttaagcagatgaatttggtacgggaattcattatctttaagactggttaaacgttgcttgagtgtaatacaggcatgatttgagccgtgcaacattgaaggcatgtcctgtctgtacagattttgtgcggtacagtaaaaatttgcaaaaccttgtcaacaaaatgaggcataaatataattattaatctcgtgtgaatttcaaaaagttcttgcattttttttaaattaaatcaaccattttgcaggagtccgggtcggcccccggcacgacggggtacgtgaacatcacgcagcaccgcggcgggcgcgtgtcgttcacggcggaggacgcggcggacagcgcgacgccgtcgagcttcgtcaagtccgtgaaggagatcccctacgacctcgccgtgctccagatcagcaagccgctgtcctcccctgaggcggaggcgcccgtggccccgccggcgccggtgaacctcaccgagctcctgtccaagaagtactgcaagaacttcgccggcctcctcgcctcgaacgccgacgtgtacagcaacatcaacgcgaccaaggacaacgggctcacgctcttctgccccgtggacgccgccgtcgacgccttcctgcccaagtacaagaacctgacggccaaggggaaggcggccatcctcctctaccacgccgtgccggactactactcgctccagctgctcaagtccaacagcggcaaggtcagcacgctcgccaccgccagcgtcgccaagaaggactacagctacgacgtctccaacgaccgcgacagcgtcctgctcgacaccaaggtcaactcggcctccgtcaccgccaccgtcaaggacgccgacccgctcgccgtctacgccatctccaagttcctgcagcccaaggagctcttcaaggtcaccgaggacctggcaccggcgcccgcgccggagggccccaagaagaagaccaagaagaagaagccgtccaccacctccgccgctgccgccccctccgacgactcctccgccgccgactcgcccgacggcacccccgcggacgacgtcgcggacaaggccgccgccgcgccgtccgtgctcgccaggtgggttaccgccgccgccacggtcgccgcggcgttggcgttggcagcttgaggtggtggtttgagcttagtgcattttgtgttgagttcttcagctcctctccctcttcttcttttgtccaattcgtgtccctcgttggtgcaaaaaataagaagggctatttatttttatatttatcgctgcagttcccagggaaaaaattgaaacaaaaaagaagaaacttaattagaggtgtgattctagagtttttcattttcttttgtttattgggtttgtggtgatcattttgtaatgatagtggtcaatgagattggacagtgtgtttatatatgattaaagacatcatcaagtttagagttgt</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0321000, RefSeq:Os08g0321000