Os08g0323000

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Revision as of 12:56, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0323000| Description = Conserved hypothetical protein| Version = NM_001068075.1 GI:115475887 GeneID:4345269| Length = 7758 bp| Definition ...")
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Gene Name

Os08g0323000

Description

Conserved hypothetical protein

Version

NM_001068075.1 GI:115475887 GeneID:4345269

Length

7758 bp

Definition

Oryza sativa Japonica Group Os08g0323000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:14193826..14201583

Sequence Coding Region

14194112..14194327,14195456..14195599,14197550..14197673,14198206..14198315,14198389..14198595
,14198688..14198815,14199028..14199139,14201164..14201356,14201521..14201543

Expression

GEO Profiles:Os08g0323000

Genome Context

<gbrowseImage1> name=NC_008401:14193826..14201583 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:14193826..14201583 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgacaaatttcaagaacaccagggctgtatatgaggagcttgggaaatatgggagtatagaaaatcaacttttatgccgtcagcgcattgaggaagtggaacctatgattggattttgctctcgcaaactaggcggatcagctttgcaagcacatgaactactagatctggaaaaggaggggcctgcttatgatcttttcaaggctaagattgaggctgtattatctgagacaagatcgcagcaggcagcttccatgaccgagtttagctggcttggtcgcagatttccaattactaatgcaaagacccgtgtctccattttgaaagctcaacagctggagaaagacttgaatggtgcaaacacagaatcagttccagcggacaaaaaacttggcatttttgacaaaatattttctgcataccatgacgctcggagctgcatccgcaatgacttggcttctgctggcaatgctgagaatataagagatgaattgaatggtcttgacaaggctgttagtgctgtcttgggattcagaaccattgagcgaaaccaattactcgttagtattgctaaaagcaagtttaccaagcaccgggatgagaagaatgagaaaatcacaaaaccagaagaacttgttcggttgtatgatctgcttattcaaaatacaacagatctgactgatttaattagctcaggaagggataaaaacaaggaagagaacacttttattcaggagtatgagctgaaaagtttggctttccgagctgagagatgtttctatttggcaaagtcatacagttcagccggtaaaagggctgaatcttacgcgctgttttgtcatgcccgttcaatcactgattctgcactgcaacagctgactaacagtcctgacaaggccttagtccaagatcttaaggctctttctgacagctgtagatccaatagcttcatagaacatgcgacaggtattatggaggaagagaatgttcctgaaagactttcgaaaggtgtctcaacattgtcacttggtgaacgaaaggctttccttcttgatatgctagaaagctatgaatcagcactcggtgaatcaaataccaaaacaccatgtcgcattgcacgattcccacctccattccaatcagttccgtgtaatcctattgttcttgatatggcctacaatgcgatcgagttcccaaacattgagaacagaatgaagaaggagaagaagggtcttctcagcagattctggggctga</cdnaseq>

Protein Sequence

<aaseq>MTNFKNTRAVYEELGKYGSIENQLLCRQRIEEVEPMIGFCSRKL GGSALQAHELLDLEKEGPAYDLFKAKIEAVLSETRSQQAASMTEFSWLGRRFPITNAK TRVSILKAQQLEKDLNGANTESVPADKKLGIFDKIFSAYHDARSCIRNDLASAGNAEN IRDELNGLDKAVSAVLGFRTIERNQLLVSIAKSKFTKHRDEKNEKITKPEELVRLYDL LIQNTTDLTDLISSGRDKNKEENTFIQEYELKSLAFRAERCFYLAKSYSSAGKRAESY ALFCHARSITDSALQQLTNSPDKALVQDLKALSDSCRSNSFIEHATGIMEEENVPERL SKGVSTLSLGERKAFLLDMLESYESALGESNTKTPCRIARFPPPFQSVPCNPIVLDMA YNAIEFPNIENRMKKEKKGLLSRFWG</aaseq>

Gene Sequence

<dnaseqindica>7257..7472#5985..6128#3911..4034#3269..3378#2989..3195#2769..2896#2445..2556#228..420#41..63#taccttgctgtttgagcaagagaagaacatagaggcagcaatgacaaatttcaagaacaccaggttaggttctagaagtttggccattatttcttgcatatatttttccataattgttctccttgttgtttgtacatatttgataatcagcgccactgctaaatcttctttgcattataattgttgggagatcattgatggctgagtgatgtattgttttatcacagggctgtatatgaggagcttgggaaatatgggagtatagaaaatcaacttttatgccgtcagcgcattgaggaagtggaacctatgattggattttgctctcgcaaactaggcggatcagctttgcaagcacatgaactactagatctggaaaaggaggggcctgcttatgatcttttcaaggctaagattgaggtatatatatttgttttcttactactgttataatatatgtttgatgttgttcaagaattatgtagaggacatgggatgtttggtgtagagataagtgcatggtttaaccttggagaatttgtttaaaattggatttttgttctttttaagtggtattgtgtgtaaggtgggagagcggtggtgcatgcacatgatacttttttactagttttctgttgtaggtgagggggcagatgggggtatgactggttccctcattttttatttgtcagaatccttttgaaaatacactgttgattgcaatgcactagggttttaaatcatgtagaccttattactgaacacatttgttatgacatgaaacgtgaatgtttgaacttttgtggttttagcggtcttgcaattcatagacatattaactatatatgatctcaacctaaaatatgatatttgcaacttgtttagttcttgctaggaagtaatgttgttgttaggccacctgttctgttcagtggattcttcagaagatgcttttctggcttatgcatgagaagcagttagagcttgtgagatccttgaaagcaatgaaactgttttgtactgcagtttttctgtgaagtgctaagtgtaaaaattcaacgaacatataggatctgcataccagtgaatgatgcagccaaatccacaaacacaaattgacatcttgactatagagatgaacatttccaaaccagaaaattgcatcgtccaaatgctgatgagcaactagctctgttcatctcaatttccggatatacaaaggcaatgaaattctttcttgagacatacaatgtttgaattactactcaaaggtcatgcaaattaaggggaaagaaacataaaacctacatctacgaaggccaccgctcgatatgatgatcagttgacatcttcattgcagccggatcatctcgaccattagtaatgaattaatgatgactggatcagaagtcaacgacatgatgagttttactggagaggcctgcatggggcagcgctggcataggagttaggagatggagagagccaacctgcaaggagtgagcagaggaggtggcttgacctaggagtgaggtggtggtgaattgaatgggacagcaggagacggtgtatagaggtggtgtgctcctagacttcatcctctttgccccctagccttatgggtgcagtttgtcccatggggtcattgggaggaaggggtaataggcaggagagaaatgtgccttttttatctgatggcattgtgggtaatttaattgcccccagtgggttgtaggtacagtatttgatgggcctgacttttccaaaatcatggtttagaatcagcttgtttattttgtcttctgcttttgtggttgagaagctggctagaagcccaaacaaagcggggcgtagtatctgcacaacgtagttagtcatttcttttgcacttgtgggaatacagtaaaataaatgcagttaggacgatgcttgttaattctgcatccttaaattactacgataatggacaatctttcgtcaacgtgaaaatttcatgatcaaattattattattttgctggtatgaacaattttggtatgattatttttgttggattatttattcatatgtcatagaacaaatcatgtagttccttgaaacccccactctctttgtatggacaactttgaaatttggacatgctaattcagcctaattcattttctaacgaagtcagaaaggaattattatcctagtccggatagtgctacattagtttgggtatatattcttggccattgggattgcatatttgaaagaggagtataaatgccacgctaggtaatctcactcttcctgacagctgatgttaggctgcgcacaatttttgctatcaattccatgcttagatttctaactgtttggaaatgataatttcatgtattctcagtcagccaaactttttttttcatcttctaatatgtttatgttggggaaattttcaggctgtattatctgagacaagatcgcagcaggcagcttccatgaccgagtttagctggcttggtcgcagatttccaattactaatgcaaagacccgtgtctccattttgaaaggtatgcagcatctttctttgtgtttgtggtcaggttggcgatacgcatggttcctacaactcagtgggtgcgtgtttggttttgtactcagggttctaccccctctttcttcttaatatacgcagatctcctgtgtattcgataaaaaaacaaattgctacgtctgcttagttttacttgtcgaattctctttaatctagttatatgatcagctcaacagctggagaaagacttgaatggtgcaaacacagaatcagttccagcggacaaaaaacttggcatttttgacaaaatattttctgcataccatgacgctcggagctgcatccgcaatgacttggtatgaaacacacgcatgcgcagcagcttatattctagaagaattctatgcatcatataatattaattcacattcttcttttctgaatgcaggcttctgctggcaatgctgagaatataagagatgaattgaatggtcttgacaaggctgttagtgctgtcttgggattcagaaccattgagcgaaaccaattactcgttagtattgctaaaagcaagtttaccaagcaccgggatgagaagaatgagaaaatcacaaaaccagaagaacttgttcggttgtatgatctgcttattcaagtaaggtttcttttatatcaggcatttatagaattgtgttcttttgctgatgtgaagctgctttaatttgcagaatacaacagatctgactgatttaattagctcaggaagggataaaaacaaggaagagaacacttttattcaggagtatgagctgaaaagtttggctttccgagctgagaggtctgttacaaatcgagcttgaatttccttttgctttccatgcacattctctgctttggctgtaaacctcctcacaattaatcatgatattggcaaatgtcttgcttgctacaagaaccttcaactacgccaattacctatctactaaaccatgtcctcaataatgagttatcaagatttagctgtgttcttttgtacagtttcccaacttctactctcatttctgcgcgcacgtttcccaaaatgctaaacggtgtgtttttgaaaaaaaaattatattgaaaagttgctgtaaaatatcatattaatccatttttcaagttcttttgcgtgtgaactacctctttttccgtgtgggagggaaaggtttccaactccctgaaatgaacattgctacaaggcattttctgtggtcacattttaaaattactgcttttatttaaaacttgctaggtttatagaatttcatttgagttatagaaatgtgcgtctaatgatgtctaatctcaagttaaattgataaactgtgcagatgtttctatttggcaaagtcatacagttcagccggtaaaagggctgaatcttacgcgctgttttgtcatgcccgttcaatcactgattctgcactgcaacagctgactaacagtcctgacaaggttttgctaaacccaacattcttcttgctgattacatgtcatgttatttaatgtattagccacagtttcaattttttttatgatcaataagaattcagtagctcctagattatggttaatatttttatcgttgatttgagtgtcaccatcaataccattttgggcttgtattattagtaatgagcatggtactaaatagtggtgatagtggccactttgtggccgctgtagtggtagtgggctctaaggtgactcgatgttactgtaacaacgtagcaattcaaatttcaaaacagtgggtatggaatagtggacgtaatagtggtggcaacggccacaataggtcaatatcatttgtagctgccatgatagcgggcactatttgtaagttgcatacacaagtttgcaacctttttaagatatgcatatgcctagtttgtcataaatgaattcatattgtttatgttagattggcaaaggaaagtgtgtatatatgctcatagataattcaaatttaaaaattttctgtacaataacatgggagaatatagtgtccgtagctcatgctatctgccactacaccagagccaatctggtaccaacccactatctgctactccctccgtcccaatatgtagcaacctaggatgggtctgggattagacccatcctaggattacgaatctggacatttcctatggctgtgtttagttcacaccaaaattggaggtttggttgaaatcagaacgatgtgacggaaaagttggaagtttgtgtgtaggaaagttttgatgtgatggaaaagttggaagtttgaagaattattttggaactaaacacagcctgtgtccagattcgtagtacccattctaggttgttacatattgggacggatgaagtagcatttttgctttggatcttgagcactgtttaattgtgagttcatgactagagttgtaagatctagtccaagcatgaaggggccattttggttcgaagccaaaatgtgccctaccaaattgtttggcactttgaacagtattttgttagtgtttggtttgcttccaaaatataccaataacacatgaaaagttaccaaaattttggcactaccaaaatttgcctaggttttggtagtaccaacattttggcatggtagcaaaccaaatacacccgaagcttcaatcctggtcaaatacttggtcacatgctgttaatgctcatctagaaagtgatagtcttatactccctccgtcccatcttaagtgcagccatgagtttccgtgcccaactttatcgttcgtcttatttgaaatttttttatgattagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgacttatgtttttattgtttttaaaaaaaattcaaataacacagacgatcaaagttgggcacggaaaatcatggctgcacttaaaatgggacggagggagtattacttgtgaaccgcgtcagggattgaagcagctagcacagttggcctgttcaatacccatgcatgttcatgacaccatataactataaatgatctattatcttagttttttaatagatgacgccgttgactttttgtcacatttgaccattcgtcttattcaaaaaatttacgtaattataatttgttttgttgtgagttgttttatcattcaaagtactttaagcatgacttatatcttatacatttgcgtaatctttttgaataagacatgtgtttgaaagtcaacggcgtcatctattaaaaaatggagggattaagttgaccagttattctatcaacataatttttgggctgttcaatgaatttttcaaagtaatgacttatggttttctcagcatgcttgtcgttcatgttttttgtgttaaaaaatgtacacagaatcttaactcaaatgctaattattacaggccttagtccaagatcttaaggctctttctgacagctgtagatccaatagcttcatagaacatgcgacaggtattatggaggaagagaatgttcctgaaagactttcgaaaggtgtctcaacattgtcacttggtgaacgaaaggtatgtttctaggacttactcaatgtggacatttactaaggtttgcatcatttgtgggatgccctgtcatttaccattgatgtctaagatcagcagaatagtgcgacgatggcatatttgacaaacattttttagaatagtaccccctccatccctaaatatagctacttttctactttaacattagcataggtaaaattagaacacaaacaatgatgctggcatgtggatccacatactggtttaagtcatcacatatgtcagcatgtccaccaggaggggaacttgaggggattagaattcattcatttgctggtttgtttgaagacttagaacaacagatatctagatcgcaatgagtagtccaatgcatagatgagatgtacttgacagttactctctaaagccacaaatacatgtttgaacaccgacatgatccataaaatgcaacataaagtcataaaccagtgtgtccattgtaatttatgcataatcctgatggacaaatacttgtcaagaagaatccacacatatttttcatgcatcaatttaaatatttaaacagatatctagatcgcaaagatgagatgtacttgacagttactctctaaagccacaaatacatgtttgaacaccgacatgatccataaaatgcaacataaagtcataaaccagtgtgtccattgtaatttatgcataatcctgatggacaagaaaacaattaataatttatacttgtcaagaagaatccacacatatttttcatgcatcaatttaaatatttaaaaacaattaataatttatacttcaagtttctaatgttctgaagcaatatctgtggattgagggactaacaattagatgcttgacatgacaagcttctgttggtgctgttctgtacaattattagaataagaatgtcttctgcatgcatgtgaagggttaagaatgtcttaggatgttattgttcgttaagtttaagtaggctagatttgcaagttaagttaatattttgtagcactttatgttgtgtattttattaccccatggatcattgcaattgaaagaaagttctggtatagaacatcttcaaacagattttgatgatatactggtattttgcagcaggctttccttcttgatatgctagaaagctatgaatcagcactcggtgaatcaaataccaaaacaccatgtcgcattgcacgattcccacctccattccaatcagttccgtgtaatcctattgttcttgatatggcctacaatgcgatcgagttcccaaacattgagaacagaatgaagaaggagaagaagggtcttctcagcagattctggggctgaaaagaagggagggcgtagttcgacaggattatcttcctcttggattttgatacattagtttggtggtttgaattggtcttttcttttgccatgaactggaacatggcactctcgattggtggaatggttttgttgggcatccctttccccttaagaatgtcatactttttttttgttaggcaaaaaaatttgcgttttcaaagtacatcagttttgaatgtcacactaactcggttacatactgtatgaagagatgattagatcgcagttcagtatttaaattgtc</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0323000, RefSeq:Os08g0323000