Os08g0326100

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Revision as of 12:56, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0326100| Description = SMAD/FHA domain containing protein| Version = NM_001068083.1 GI:115475903 GeneID:4345277| Length = 2783 bp| Definit...")
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Gene Name

Os08g0326100

Description

SMAD/FHA domain containing protein

Version

NM_001068083.1 GI:115475903 GeneID:4345277

Length

2783 bp

Definition

Oryza sativa Japonica Group Os08g0326100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:14413355..14416137

Sequence Coding Region

14413732..14414530,14414951..14415417

Expression

GEO Profiles:Os08g0326100

Genome Context

<gbrowseImage1> name=NC_008401:14413355..14416137 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:14413355..14416137 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtaccgtggcgggcttgaccgcttcaagaaggctcaggccttggagccattctccgttcaatccggttcggcggccaagaatgtacctgcagcggcgagaacagctaaaggaccgccggctccattgacactgccacagaattcacatgttggaaccagccagagtcacctgagtccgcaaggtgccagtttgagggtggccgggcaagagaccggggcgccggggcatgctgggacccaggtcggtggtgggcaatcagcgtggcagccacctgactgggcgatagagccgcgccctggggtttactatcttgaggtgttgaaggatggggatgtcattgatcggatcaatctggagaagaagaggcatatatttgggaggcaggtacctgcatgtgatttcgtgttggaccatcagtctgtatcgcggcagcatgctgctgttgttccacacagaaatggaagcatatatgttattgatttaggatcagttcatggcacatttgttgcaaatgagagactaactaaagacaaccctgttgaacttgaagttggtcagtcacttcgctttgctgcatcaaccagaacctatatcctacgaaagaatagcgctgcctttttcccaactcatagtcttccatcagatgtcagtctgccatctccaccagaccccaatgatgaagatgctgtggtcgcatacaacacaatacttaaccgctatggtattagtaaatcagacttatccagatcaaaagattcttcgggagatgcctctggtgcaaatgatgataacgagccagctggaaggcccttgaagagaagtaaaaaactaagagtatcatttagagatcaagttggaggagaacttattcaagtggttgggatttcagatggcgcagatgttgaaactgaaccaggtccagtaggggtgaaggaaggcagtcttgttgggaaatatgaatcccttgtacaggttactgtcattccaaaaggaaaggagcaaccttcaccaaaggaaagtgcatcccccagtggggtaacagataagctaaaacaggttcttaccaaagttaaaagcacagcaaaaggtggaatttatgatgatctttatggggatactgttccacaactattgggcccatcttgggcatacaggtcggatgaccaggcagaaaaagtcaaagctgctgatgaaaagaagtctagtgggaatatggatacaaattcagctgatgataatgatgacttgtttggtgacttgtga</cdnaseq>

Protein Sequence

<aaseq>MYRGGLDRFKKAQALEPFSVQSGSAAKNVPAAARTAKGPPAPLT LPQNSHVGTSQSHLSPQGASLRVAGQETGAPGHAGTQVGGGQSAWQPPDWAIEPRPGV YYLEVLKDGDVIDRINLEKKRHIFGRQVPACDFVLDHQSVSRQHAAVVPHRNGSIYVI DLGSVHGTFVANERLTKDNPVELEVGQSLRFAASTRTYILRKNSAAFFPTHSLPSDVS LPSPPDPNDEDAVVAYNTILNRYGISKSDLSRSKDSSGDASGANDDNEPAGRPLKRSK KLRVSFRDQVGGELIQVVGISDGADVETEPGPVGVKEGSLVGKYESLVQVTVIPKGKE QPSPKESASPSGVTDKLKQVLTKVKSTAKGGIYDDLYGDTVPQLLGPSWAYRSDDQAE KVKAADEKKSSGNMDTNSADDNDDLFGDL</aaseq>

Gene Sequence

<dnaseqindica>1608..2406#721..1187#cccgcacgcacgccgccagtcgcatcgcatcgaccccatcgctcgctcccctccgcgccggcggcgccgcccgctccccgtgttccctcgcgtgctcccctcacacccgcgccgccatccctccctccctccctcccatcgccgccgctcctccgtcgcccgccgtggggagaaaagtcgggggcggggcggggcgaggaagtcggggatccgaggcggggagtgttaccaccaccgctacatccggaccagcgcccgagcagccgcagtccgcagacgccaccaggcaaaccccaatccccatcatccccaacccctccgccgccgccgcaaccgaagcaccccggcggcctcgatctcctcggaagcttccaaccgagcctagatgaatccgggctagcacttctcggctctcggtaagccctaagctgttaacgatttcgctttttcctgatttgcgccctgagcccgtgaccgaccgatcgatcgatcgaatcctttttgtctgtagtgtactccattcgctatccaaatccagtgctgagtttgttgctgttactgattttttaggccggagattcttgcgctggcaatctagcgaaatttcactagggttcattggacgctgcaggtgcgcaggggccagggccatcagttgcttgatttgttgtgttattaagagaccagaagtggtggtgataccagcgtggctttcgggatatgtaccgtggcgggcttgaccgcttcaagaaggctcaggccttggagccattctccgttcaatccggttcggcggccaagaatgtacctgcagcggcgagaacagctaaaggaccgccggctccattgacactgccacagaattcacatgttggaaccagccagagtcacctgagtccgcaaggtgccagtttgagggtggccgggcaagagaccggggcgccggggcatgctgggacccaggtcggtggtgggcaatcagcgtggcagccacctgactgggcgatagagccgcgccctggggtttactatcttgaggtgttgaaggatggggatgtcattgatcggatcaatctggagaagaagaggcatatatttgggaggcaggtacctgcatgtgatttcgtgttggaccatcagtctgtatcgcggcagcatgctgctgttgttccacacagaaatggaaggttagactaaaaataatgctaatgttaacacagttgtgattccacttgttgattttgtctttgatggtagtttttttagccgctgtttgttactgaatgctacgcatgctagcagtggaattgagcttaataattcataagcaacaacctatatgaaacaatgtggttcaacaacaccattcatattatcaataaaaaaatcaatcccttggatgcacctaaatttcaagtttagtttcagaacagttgcctatgtcatgttgcaatgtgttttctttttgaagaaccttaaggcatgccttgctcagaatttgtcggccagaaaaaccactgggcctcaaatggaaaacatttctacttttattgacactgctgctttggtgcatcactgacattttttccattctttttgtatttcagcatatatgttattgatttaggatcagttcatggcacatttgttgcaaatgagagactaactaaagacaaccctgttgaacttgaagttggtcagtcacttcgctttgctgcatcaaccagaacctatatcctacgaaagaatagcgctgcctttttcccaactcatagtcttccatcagatgtcagtctgccatctccaccagaccccaatgatgaagatgctgtggtcgcatacaacacaatacttaaccgctatggtattagtaaatcagacttatccagatcaaaagattcttcgggagatgcctctggtgcaaatgatgataacgagccagctggaaggcccttgaagagaagtaaaaaactaagagtatcatttagagatcaagttggaggagaacttattcaagtggttgggatttcagatggcgcagatgttgaaactgaaccaggtccagtaggggtgaaggaaggcagtcttgttgggaaatatgaatcccttgtacaggttactgtcattccaaaaggaaaggagcaaccttcaccaaaggaaagtgcatcccccagtggggtaacagataagctaaaacaggttcttaccaaagttaaaagcacagcaaaaggtggaatttatgatgatctttatggggatactgttccacaactattgggcccatcttgggcatacaggtcggatgaccaggcagaaaaagtcaaagctgctgatgaaaagaagtctagtgggaatatggatacaaattcagctgatgataatgatgacttgtttggtgacttgtgactgttggcgttttcaattagtacagagaaatggatctcctgaaaatgcttaagagcagaagtattttgttctgtcgggggtattttgctttgttctgcatgattgtatcctgctgcaaattaaggtaatctcttttgcctaatgtttagggcatgcatttttatgacggtgttcacagtgattggtgagtttaattgctttcttcaccatgtcctcttgtggtgattttttcccttacccagtctagctttccaaaatttatgaattatatttcatattttaatcgtttgctttttcaaatgttctgaactttcctgtggtaaaattctaactgtacatcatctgtgatgttttgtgattcaatcgcttggtaatgg</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0326100, RefSeq:Os08g0326100