Os08g0326300

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Revision as of 12:56, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0326300| Description = Plant MuDR transposase domain containing protein| Version = NM_001068084.1 GI:115475905 GeneID:4345278| Length = 735...")
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Gene Name

Os08g0326300

Description

Plant MuDR transposase domain containing protein

Version

NM_001068084.1 GI:115475905 GeneID:4345278

Length

7350 bp

Definition

Oryza sativa Japonica Group Os08g0326300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:14419013..14426362

Sequence Coding Region

14419786..14419856,14419982..14420987,14421085..14422637,14422720..14422848,14422920..14422971

Expression

GEO Profiles:Os08g0326300

Genome Context

<gbrowseImage1> name=NC_008401:14419013..14426362 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:14419013..14426362 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggtggctccaaaggagggcactttgcaggcgttggcgtacttcatagttcccagtgagctcccttccgggatcgatcctgatgcggcgtttattgtgtgtgttcggtttggtcagtacacagctaagcttgatgatggtagtagtgttcatgtgccaagcaaatacgctgaatgggttgtagactatcgacaatgcacattagagagcttggaaaaggattttgcagccagggtaaaatggggtaggtgccaacaggttgtggtgtatggatatgacaagagaactggcaaggaaacaaagtttttggataatatggatctagcgcatgcattatttgattggaagagggagaggaggctgattttatttgtggatgtggaggataaatctggtcaattagttactagctcttctatttcagaggtaaatgagttagtcatgggtgaggttgtgacagccaagcaaggtgatgctctagactcaagcaatcaacatctcattgattgggatagtttcaagatatctccaattctagaggagcaaataggttcttcagtgcccatgatgaaggaagatgaaatgtcaattccacaagagcaagttcctcagcatgtcattgattgggatggattggagatagctccaattccagaggagcaaattggttcttcactacctgtaatggaggaagatgaaatgtatgattttcttggactcagaactgaggatgagagagcggatcaagctaggcttgaagctgaaaagcagagggattctgctcctggtccagctccacgtcttgcacagcgggacttgaaccttgatgaggcagagatagatgctaggtttgaagctgaaattttctatgatagggatgaccctccaatgatagttggaagctcatatggaagtatggttgagtttagatcagctgtgaggcaacacgctataaaggggcaatttgagcttgggacagagaagtctgatccagaaaggttcaggggctattgcaaagctgagggatgtccatgggctattgtggcaaggttgatgcctgatggaaaatctgtgaaggttactttgaacagatttgcacatgcttgtacatctattgagggagttaagacaaagatggtatcatataagtgggttgcagagaaggcaattccttttctaaagaaggatccaaatatgggtgcaaagaagctaaaagaggagttagagaccaaatacaatgtcacagtaggatactcaaaagtgtggcaaggtaggcagaaggctgtggagcagatatttgggtcatgggaagagagctatttgtttaacttcaaggctgaggttgagctgaaaatgcctggaagtgtggtggagatagatgtacaggaggatgatgatgggatttatttttgtagattcttttgtgcattcaaaccttgcattgatggtttcatgaatggatgccgaccatacttgagtatagactccacagcctttaatgggaaatggaatggtcatctaccttttgttacatccatagatgggcacaactggatgtttccagttgcatttggattctttcagagtgagaccactgacaattggacttggtttatgcaacagcttcacaaggcaataggcaaaccatcacacttagcaataagctcagaagcttgtaaggggctagagaatgctgtgaaaagtgtttttccttgggcagagcatagagaatgcttttgtcacttgatgcagaatttcgtagagaagttcccaggtccgatgtatgggaacatgtaccctgcagctagatcttacatgcaagataggtttgagcactacatgaatataatccatgagactaattcagatgtgaaaccatacttggaaacctatcacaaactgctttggatgaggagcaagttctcagaagagataaaatgtgacttcattagcaataatctggcagatttatggaacaaatggattaaggatatgaaggatcttccagttgctgagcttgcagatgctatcaggtcaaaaataatggatctattggcgaggagaaagaagataggtgagaagctagatggtgagatgctccctattatagttcgtcaactcaatgcaatgactagatccttgggccacttgagggtggttcaaggtgatagagaccaagcagaggtggctgagatcactcctgaacatgagattattaggcatagggtcaatcttgcaaaacatacatgcacctgtagagagtggcaagtttctggcaaaccatgcccacatgcattagctctcataatatcaactagaaaccccagaatggctgattatttggatccttgctattcagtgcaaaagtataagcttgcatatgcaggtgttattcatccactttcagataagtcccaatggccaaaagtcaatcttggtttcaatttgttgccacctctgactaagaaagacgtagagaagcaaaggaagaacatgatagttgggtgtcttgataaagaacaaggcaagcttaggaccaaaggcaagtggcaggttcagtgcaagagctgtcttggcatgggccatagggcaacatctccaaaatgtcctttaaattcccagaaaataatgaagaatagtgacaaacaagggagaccactaggttcaactagttgtgcagcgggtgctagcacacccaaaagacaaaaagtttcaagaaatgattccagcaatgctagtcctggacctgtctctgaaaggcaattggcgttgaccaaggctgctggagaagacaatttttattgtgcttga</cdnaseq>

Protein Sequence

<aaseq>MVAPKEGTLQALAYFIVPSELPSGIDPDAAFIVCVRFGQYTAKL DDGSSVHVPSKYAEWVVDYRQCTLESLEKDFAARVKWGRCQQVVVYGYDKRTGKETKF LDNMDLAHALFDWKRERRLILFVDVEDKSGQLVTSSSISEVNELVMGEVVTAKQGDAL DSSNQHLIDWDSFKISPILEEQIGSSVPMMKEDEMSIPQEQVPQHVIDWDGLEIAPIP EEQIGSSLPVMEEDEMYDFLGLRTEDERADQARLEAEKQRDSAPGPAPRLAQRDLNLD EAEIDARFEAEIFYDRDDPPMIVGSSYGSMVEFRSAVRQHAIKGQFELGTEKSDPERF RGYCKAEGCPWAIVARLMPDGKSVKVTLNRFAHACTSIEGVKTKMVSYKWVAEKAIPF LKKDPNMGAKKLKEELETKYNVTVGYSKVWQGRQKAVEQIFGSWEESYLFNFKAEVEL KMPGSVVEIDVQEDDDGIYFCRFFCAFKPCIDGFMNGCRPYLSIDSTAFNGKWNGHLP FVTSIDGHNWMFPVAFGFFQSETTDNWTWFMQQLHKAIGKPSHLAISSEACKGLENAV KSVFPWAEHRECFCHLMQNFVEKFPGPMYGNMYPAARSYMQDRFEHYMNIIHETNSDV KPYLETYHKLLWMRSKFSEEIKCDFISNNLADLWNKWIKDMKDLPVAELADAIRSKIM DLLARRKKIGEKLDGEMLPIIVRQLNAMTRSLGHLRVVQGDRDQAEVAEITPEHEIIR HRVNLAKHTCTCREWQVSGKPCPHALALIISTRNPRMADYLDPCYSVQKYKLAYAGVI HPLSDKSQWPKVNLGFNLLPPLTKKDVEKQRKNMIVGCLDKEQGKLRTKGKWQVQCKS CLGMGHRATSPKCPLNSQKIMKNSDKQGRPLGSTSCAAGASTPKRQKVSRNDSSNASP GPVSERQLALTKAAGEDNFYCA</aaseq>

Gene Sequence

<dnaseqindica>774..844#970..1975#2073..3625#3708..3836#3908..3959#agctagcccgcacgcgattcgctcgcctcgcctcgcctcgcctcgcgcgacggtgagagaggtgcgcgggcgggaggtatcggcggtggaggctggtcgtcggcggagcagcgctggtggctggctggtcaggggcggagcagggcggcgcttgaggtcgaccggcggcggagcagcggtgggagtcgaaggcgcgcccgacgaggttgcccaccgccggcgtcgggtcgtcgtatggttgtgaagaagcaggttcggctcagttcctttgttcttctcgctagctaaattgtgttggtttttcttagaattccaagtttcacaaaaactgagaaaaccgtagacctaatgcccaccccaccccacccctggatggctagatgggattgtcacatcaaattcggtttcgcctaagtaaattccacctcatgaaattcaattagtaattagctagccgtcgctgcctcttcactcagctgcatctcccacaaacggaacaaaactttgaaaacgctcgctggaaccggccagggaaccttaggggtaggggtggggcttggataggtactccaaaggcattggttatttcttgatcgcattcgctaattaatagtaatttttaactaattacatgtgcccattacataacttttgcctatcgtacttcttctaatatggacttgattactattaccttccttcagcgtaggaagagagatttcattatatgccactcctaattggtttgtagggtgagagggggagaggtggcaatggtggctccaaaggagggcactttgcaggcgttggcgtacttcatagttcccagtgagctcccttccgggtaaggccataaaaaaatcctcatctccattattgttcaacaggaggagcaagaaactaggtcagaagcgatttagcaagcaaactaatggtcttcctctcatttttgtttttcctatatgataggatcgatcctgatgcggcgtttattgtgtgtgttcggtttggtcagtacacagctaagcttgatgatggtagtagtgttcatgtgccaagcaaatacgctgaatgggttgtagactatcgacaatgcacattagagagcttggaaaaggattttgcagccagggtaaaatggggtaggtgccaacaggttgtggtgtatggatatgacaagagaactggcaaggaaacaaagtttttggataatatggatctagcgcatgcattatttgattggaagagggagaggaggctgattttatttgtggatgtggaggataaatctggtcaattagttactagctcttctatttcagaggtaaatgagttagtcatgggtgaggttgtgacagccaagcaaggtgatgctctagactcaagcaatcaacatctcattgattgggatagtttcaagatatctccaattctagaggagcaaataggttcttcagtgcccatgatgaaggaagatgaaatgtcaattccacaagagcaagttcctcagcatgtcattgattgggatggattggagatagctccaattccagaggagcaaattggttcttcactacctgtaatggaggaagatgaaatgtatgattttcttggactcagaactgaggatgagagagcggatcaagctaggcttgaagctgaaaagcagagggattctgctcctggtccagctccacgtcttgcacagcgggacttgaaccttgatgaggcagagatagatgctaggtttgaagctgaaattttctatgatagggatgaccctccaatgatagttggaagctcatatggaagtatggttgagtttagatcagctgtgaggcaacacgctataaaggggcaatttgagcttgggacagagaagtctgatccagaaaggttcaggggctattgcaaagctgagggatgtccatgggctattgtggcaaggttgatgcctgatggaaaatctgtgaaggtactaacaactagctaagaattgtctcatatttcaaatttatgtttgttagtaagaactgtcttatgttactaactaatggatttatgtgttgtaggttactttgaacagatttgcacatgcttgtacatctattgagggagttaagacaaagatggtatcatataagtgggttgcagagaaggcaattccttttctaaagaaggatccaaatatgggtgcaaagaagctaaaagaggagttagagaccaaatacaatgtcacagtaggatactcaaaagtgtggcaaggtaggcagaaggctgtggagcagatatttgggtcatgggaagagagctatttgtttaacttcaaggctgaggttgagctgaaaatgcctggaagtgtggtggagatagatgtacaggaggatgatgatgggatttatttttgtagattcttttgtgcattcaaaccttgcattgatggtttcatgaatggatgccgaccatacttgagtatagactccacagcctttaatgggaaatggaatggtcatctaccttttgttacatccatagatgggcacaactggatgtttccagttgcatttggattctttcagagtgagaccactgacaattggacttggtttatgcaacagcttcacaaggcaataggcaaaccatcacacttagcaataagctcagaagcttgtaaggggctagagaatgctgtgaaaagtgtttttccttgggcagagcatagagaatgcttttgtcacttgatgcagaatttcgtagagaagttcccaggtccgatgtatgggaacatgtaccctgcagctagatcttacatgcaagataggtttgagcactacatgaatataatccatgagactaattcagatgtgaaaccatacttggaaacctatcacaaactgctttggatgaggagcaagttctcagaagagataaaatgtgacttcattagcaataatctggcagatttatggaacaaatggattaaggatatgaaggatcttccagttgctgagcttgcagatgctatcaggtcaaaaataatggatctattggcgaggagaaagaagataggtgagaagctagatggtgagatgctccctattatagttcgtcaactcaatgcaatgactagatccttgggccacttgagggtggttcaaggtgatagagaccaagcagaggtggctgagatcactcctgaacatgagattattaggcatagggtcaatcttgcaaaacatacatgcacctgtagagagtggcaagtttctggcaaaccatgcccacatgcattagctctcataatatcaactagaaaccccagaatggctgattatttggatccttgctattcagtgcaaaagtataagcttgcatatgcaggtgttattcatccactttcagataagtcccaatggccaaaagtcaatcttggtttcaatttgttgccacctctgactaagaaagacgtagagaagcaaaggaagaacatgatagttgggtgtcttgataaagaacaaggcaagcttaggaccaaaggcaagtggcaggttcagtgcaagagctgtcttggcatgggccatagggcaacatctccaaaatgtcctttaaattcccagaaaataatgtaagatcacacatttacttgttctagcatatttattgtccatttccttttgaaaatatatttacttgttttacattttcaggaagaatagtgacaaacaagggagaccactaggttcaactagttgtgcagcgggtgctagcacacccaaaagacaaaaagtttcaagaaatgattccagcaatgctagtcctggacctgtctctgaaaggtaagatctttctatttgaatggtattgttgatcctgccttatgttttaactaacactcaatttattcaaggcaattggcgttgaccaaggctgctggagaagacaatttttattgtgcttgatcagcatgctgctggaaattttttgtgtgtgatcagtatgctgctgaagctttttacttgtacatgatgctaaaagttctgtaagctccaagtccttgatcaatcctgcacaggtatggcacaaagcagtgaaaaacagagacgaaagacaccaaaatcatcttctttacattacatagtatttacattacatggcaaacgaaccaaaatgaaatcttccacatcaattgatctctcatagtctgatatgtccattttgcacgacatcaaataattcctgctactgctgcttgtaatttccatcaagtaattcctgctactgctactgctgctgctttgccaactccatcaaataatttgttctcttcatgctaacgctttgcctgcttctgctgtgccgtggggcctgccatcggggcggtagtggcgacccacggtggtggtggtggtggtggtggtggtggtggtggtgctgtgcagtggcagggtatggccatggttgtggcggcctgagtggtaatgggcccaacattttacactcgaaaattggagggctgggtttaaaaaggggctgggctcaatttttatacatttttggcttaaaaatatttgagggctagggttgtgaaagagcccatgggccttgacccattaccacccctacgtggcgatggtgaggcatggggacaggggtgctgggcctaccgatgcggtagtagtggcaatgaggcgatggagtgcgtcggcatcgagcgaatgagacgagccaccagggacttgctttgatcgattgattagattgatctatttggtcagcaggggcaaaagtgtccttaaccctaggagagaagaagaaaatggaaggaaaaagaaattggggaaaatgggagtctgttcagttcgtcggtttcaccgagtaaccgagaaaacccacctgtatgtgctacgatgccgagggctggagtcctgcgagcagcatggcaatatattgggctgcggtggtggtcagatgggtttgataggctacggcgataggggttgttaacagtgataggggttggtaacggcaataggggttggtaagaactgatggtattaatgggcttttccaccagtcggagggcctccacgatgtggttttcatgcaggaggatggggtcgtagagattgatcggttgtgtgggttcttcggttttccagagatgagaaaccgagagaaaagtcgaagatcgaagcaccgtagaaataaaaccaaagggataattgaatacccaaaaaaggacactatgattcggttcagccttttgttttcagtgattttatgcccacccctatcctccatgttgaaaataattgttgttttgggcaagactaatgtcaaactttaaaaactttgaccatgtataaattctaaaatattttccttaaaaacatggagaccatagtatagattgatcttaaaatgtactttaataaaatcatactataataaatactaacgaaaggaagaaactttgccacacctctagaaggtcctcgaatcgactatctgccctcctcttttcattggtttgtttgcaacggtttcccattctcctatgcccctctaggttaaaaatagttgttgttttggacaaggacatgggcacggtctccaaaaaataactttgaccactactttttcttacaatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatataggacactcatatggggcaccatggtatcaaatgcacaaaatcacttaaatttttcaaaattttcaaattgtgagtatatacctagttataagaattcgattcatacctatacctatcaacaaataactcaaatttaactttatttcacaatccatgattacataactaactaattatatatttggatgctatatacctagaatcaaaatctaacaaaaacaagttcaaattcagttcaaacttgctttgaactagttagtaaagtagttaatgttaatacctaaatatttgaaaaagtttcatactcatttgaattgggtatatactcaatttcaaccatggtgcccgggcaccatggagcaccaaacaaatttaattaccgtcctgcactccattcttcaggccacctagaatagagatagctaagctagacgacaggcatacaaaccaaggtttcaatgtgtgactatatttaatcactccaattttcttttgactcgactatttgatttatgaacaaattaaactgatatgcttgttgatcaaacaagcataccatgcatttggctctaactactgccatcattggataaatgagaaaactgctctcttgcccaatctttaggtgggattccctcaggtatcctagtgtttgttagattttctcaattcccccatagtttaatggaaatctgtgtgttttcctcaaagtcttctgaattttccttgttttcatctcaccttcccgtagattatttgtaattgcaagtactaggctattattttcactaacaaaaagctgatcatacctcaactaaattaaaagacctagaaatagcgtaggggctacggtcacacgaaggtgtgactaatgaactagtgactgtgattgttctttgtcagatatacactgttaaaagaccataatttattaatcaacacagaatctactgttttgttggaattgttccataagtgagttgtcagttatgaacacatgctgtttattgttcattttgacatgcatgaagcattgaacacatgttgctcctgtactaactgccttattattctttttcttttagctcgtagtttggtggtgcagcatttggggataatgcggatcctgctgtaaaatgccttctgcggatacaaccatcttaagagtgcgtgtcagttacaggatacgagggcacagcaggcccgcttgaattccttctccatgtggtggaaaatgcacctgcactggagattttaacagtagatgcagcctgtgcctgataaaaggggaactttttaatgctttttgtcaggcttctcgacatcacctcgttcggaggctgccgcctagcaaagttggtcctgctgtgagataaaaggatttatttgtactcaggaagtcaggatatgcgaggtttaagtagcaggtcattagtcaattactactactacctcccatctgttgctaggtttctatatattgtgacagaagtagtaaaattgcttttgccaatttcatttaacttcactatgtaatgctgaatgaagtatatgtatgttcatgaagcaatcccccgagaaatgctaatcttgaaattagatataac</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0326300, RefSeq:Os08g0326300