Os08g0326500

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Revision as of 12:56, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0326500| Description = Glycoside hydrolase, family 17 protein| Version = NM_001068086.1 GI:115475909 GeneID:4345280| Length = 5235 bp| Def...")
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Gene Name

Os08g0326500

Description

Glycoside hydrolase, family 17 protein

Version

NM_001068086.1 GI:115475909 GeneID:4345280

Length

5235 bp

Definition

Oryza sativa Japonica Group Os08g0326500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:14437351..14442585

Sequence Coding Region

14437353..14437933,14441059..14442187

Expression

GEO Profiles:Os08g0326500

Genome Context

<gbrowseImage1> name=NC_008401:14437351..14442585 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:14437351..14442585 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>cttcttttttttttcttttccttttttgctctccatggcttccacctcctcatcagccatcacctctccctttgcaattctctaccaaagcgagcatcactactactagtgctccttccactctctcctcctccttacactgtccctccatggaggaggcccctgcaagaagcgcctaaggatccctccattcgggttcaccccaccacaatggcggcggccaacgccggcgccatggtgcgcttcgtggcggcgttcttggcggcggtgctggtgatgatggtgccatgcgcgccgcgggcggcggcggcggcggtcggggtgaactggggcaccgtgtcggcgcaccgcatgccggcgcccgtcgtggtggagctcatgcgcgccaaccgcatcggcagggtcaagctcttcgacgccgaccaggccgccctccgcgcgctcatgggcagcggcctgcaggtcatggtcgggatcaccaacgagatgctccagggcatcgccgcctcccccgccgccgccgacgcctgggtcgcgcggaacgtgtcgcgctacgtcggccccggcggcgccgacatacggtacattgctgtgggaaatgagccattcctgacaagctatcaggggcaattccagtcatatgttcttccagcaatgaccaatattcagcaatcattggtgaaagctaatcttgcaaggtacatcaaactagttgtcccatgcaatgctgatgcatatcagagtgcatctgttccatcacagggagtgttcagacctgatctgattcagattattacccagctcgctgcttttcttagctcaagtggtgctcctttcgtggtcaatatctatccattcctcagcctttaccagagctctgatttcccacaagattatgccttctttgatggatctagtcacccagttgtggatggccctaatgtgtactacaatgctttcgatggcaattttgacacattagtttctgctttgagcaagattggctatgggcagctaccaattgcgattggcgaggtgggttggccaactgaaggggcaccaagtgcaaacctgactgcagcaagggcattcacccaaggcctgatcagtcatgttttaagcaacaaaggaactcctctacgtcctggggtgcctccgatggatgtatatcttttcagccttcttgatgaagagcagaagagcacattacctggcaatttcgagcgacactggggagttttctcatttgatggacaagccaagtaccctctgaatcttggattgggcagtccagttctgaaaaacgccaaagatgtgccatatcttcctccacggtggtgtgttgcgaaccctggtcgagatcttaacaatgtcgagaatcacctaaagcttgcttgtactatggctgattgcaccaccctctactatggtggctcatgcaatgctattggggagaagggcaacatctcatatgctttcaacagctactatcagctgcggaaacaggacgcccagagctgtgatttcgatggacttggcatgatcacttaccttgacccatccatcggtgactgccgctttcttgttggtatagatgacagtagaacatctacaatctattcttcaggtgactgttctcggaggcgctttggattgtggatcttggcgttcttggtaattgggttccttcagattggggtttatttgtga</cdnaseq>

Protein Sequence

<aaseq>LLFFFFSFFALHGFHLLISHHLSLCNSLPKRASLLLVLLPLSPP PYTVPPWRRPLQEAPKDPSIRVHPTTMAAANAGAMVRFVAAFLAAVLVMMVPCAPRAA AAAVGVNWGTVSAHRMPAPVVVELMRANRIGRVKLFDADQAALRALMGSGLQVMVGIT NEMLQGIAASPAAADAWVARNVSRYVGPGGADIRYIAVGNEPFLTSYQGQFQSYVLPA MTNIQQSLVKANLARYIKLVVPCNADAYQSASVPSQGVFRPDLIQIITQLAAFLSSSG APFVVNIYPFLSLYQSSDFPQDYAFFDGSSHPVVDGPNVYYNAFDGNFDTLVSALSKI GYGQLPIAIGEVGWPTEGAPSANLTAARAFTQGLISHVLSNKGTPLRPGVPPMDVYLF SLLDEEQKSTLPGNFERHWGVFSFDGQAKYPLNLGLGSPVLKNAKDVPYLPPRWCVAN PGRDLNNVENHLKLACTMADCTTLYYGGSCNAIGEKGNISYAFNSYYQLRKQDAQSCD FDGLGMITYLDPSIGDCRFLVGIDDSRTSTIYSSGDCSRRRFGLWILAFLVIGFLQIG VYL</aaseq>

Gene Sequence

<dnaseqindica>3..583#3709..4837#accttcttttttttttcttttccttttttgctctccatggcttccacctcctcatcagccatcacctctccctttgcaattctctaccaaagcgagcatcactactactagtgctccttccactctctcctcctccttacactgtccctccatggaggaggcccctgcaagaagcgcctaaggatccctccattcgggttcaccccaccacaatggcggcggccaacgccggcgccatggtgcgcttcgtggcggcgttcttggcggcggtgctggtgatgatggtgccatgcgcgccgcgggcggcggcggcggcggtcggggtgaactggggcaccgtgtcggcgcaccgcatgccggcgcccgtcgtggtggagctcatgcgcgccaaccgcatcggcagggtcaagctcttcgacgccgaccaggccgccctccgcgcgctcatgggcagcggcctgcaggtcatggtcgggatcaccaacgagatgctccagggcatcgccgcctcccccgccgccgccgacgcctgggtcgcgcggaacgtgtcgcgctacgtcggccccggcggcgccgacatacggtgagtccccgccgcgctccctcctgtaatttgggaaaaaaatggattccttttttccttgagtctctcgctgcaatggaagaatctctgcgttcttgcatacctacatcttgctgtattgtgtttgttggattcttgctggcactgtgtttgtgttaatgcctacttgcctagtcaatgagatattgctagtctactgactcggaacagtgttaagtgcctctgcttgttttctttttcggaaggtcactgttcgttctcttctcttatgttgattgatctggggttattatattaatttaaggtgtatctttctcttgatgactggaagtttgtttatagattgtcaggggatgcagtctagtgtaatgctccttatactgattcaagttgaatttagttagtgcaagtgcaatgcagacccgattgccttttatggacaattgcgccagtacatatttgtgtcggacttggaccacacaattgcactgttatttatgatgaacttgacttaatggaccctgtgattctgttgtagtcgcctttgtgtctgtggtttcagtttaatggttgaactgaaattttgctttgtgcaatacacgtccttgtcattatgtagattatgaagttacctgcgttttcaatttattttcaggcacataaaacaagacacgattttcttacaaaacttaaatgcacgtcaagatgtttttgttctgctctgagagttggcattaataaaaacataaataacacttggtaccttctgttctgtatcttttagtcactatgaagcttctacttgtcagagtagaacacaaggcatgcaaagatggtaattttctatgatacacatcctgaaaatataccatgtgtatggtgatttctagatatcatttggcaaacaaaagctctgtcaaaattctgaacgatcattgaaaatacagtattgacatgccaaaagcccaaagcaatgtatagccaccagccttatttttgttaagcaagtgctactatgtttgaagttatttctgttactttttagaacatttcaatatacaggattcctcaaggattaaaatgtgataattatccttgcaaagcatagtaaaatgtgtttcaagagacagtgtctttttccatctgctagatttcattcattgatgcacgtgttagatgccagaatatatctgcacatcatgagtccaatttagcgtttaattttctactgctttgggatgtcaaatttagcttttccatgcaatccaccggatgtcaatagttgtatattccactattcctctatctgatggagtatacactggaatagaactcaacatttgttggtgctaacacttatccattttttgttcatatcctaggaaataggggtatctaaagtagcctttgagcttgaatggccctgcactttatttgtttgtggtcatctatattgtatttttaagtcatactgtattagtgttaacatgctacccacacaaaaaggtgctggcattcagaacaggaaaatggataaagaaagattgtgggtagcagacattctttccatgtcaaaagaaggaaaatgagagaaaataagttgtatgacatagcttttcctgccgaccttagccatgatagcaatctagcaaaagctttacacccatactctgtctaattcagtcacatagatgtgctagtgtacaaaagcttttggtgcaaacatcactgcaaagctggtgagaggaagcaaataatttccaaataccaaatattaaagcaaggaaaggaaataaacatatttatctgacatataaacaggaaagtggttcttactactctcttactctctatatctggtaactggcaagggcttaccgttgcatcacttgttgtcacttgtctctcgaattggacagttgctgagtcaagcttatatgttctaacccgatcatttggcatgattaatcttctactatgtttgttatgggttgcatagggggtaaacaccgctgggaggatagctgagcggcacggctgctagggatgagagagggacttgggtactgtttatgtttttgttgttttctgtggacatgcctgcatttgtttgctcaatttcagaacacacagcagttggctgcatttacatgactacatttttgttgaaacaatttcttttgtaggtattgaatagatgaactattgaatatgtactgtttctctatttcatgaagttttaatcggagtaaccaaatgggtcatcccagcaacgatcaaatgatttgatcatgagataatccattctatgccatcgtcaaagcatgaattttacaatatgccactgacaaaacttagttcaataatataccatccaacaacttgttttctttcttatatgtcatcgccactagtcaaccattagtcaaactccgttaagggagagaaaatatctattttacacctaggatatcatgctacatgtggattttattggtcatgatccactattttttctcattgatgaaaaatagaaacagcatgtctttttatcatgtaagactatttgatgtgatatggcattgtgcaaaatctcaattttatcctaggggtaaaattgtcattttccttcccttaacggcgtttgactaacggtgatggtatataaggaagaaaacgaattgtttgatggtatattgtagaattaagctttgtcggtggtatattgtaaaccaatgacatagaatggattgttgtgatcatggaacataatttttgttttcatttaaggtggtcagcctggtaggactgtgaagtgtgaaccgagtggaaagcaacataaaatgcatgcttttctaaaaaaaaatactaatgttgagtatgggttaaattacaggctagagaatcctttatttcagaatatttgctgggaagttaatttatgtgcttaatttttttttgttgtacctatattcctatggatgtctattcgagctgtttttacttgcttgagaattttctttcttttctctgaaatctgttatgttgcttactttcttcctctgctaaatttgtttatgactttactttattcattttcttatacttgtccctaatttaaacaggtacattgctgtgggaaatgagccattcctgacaagctatcaggggcaattccagtcatatgttcttccagcaatgaccaatattcagcaatcattggtgaaagctaatcttgcaaggtacatcaaactagttgtcccatgcaatgctgatgcatatcagagtgcatctgttccatcacagggagtgttcagacctgatctgattcagattattacccagctcgctgcttttcttagctcaagtggtgctcctttcgtggtcaatatctatccattcctcagcctttaccagagctctgatttcccacaagattatgccttctttgatggatctagtcacccagttgtggatggccctaatgtgtactacaatgctttcgatggcaattttgacacattagtttctgctttgagcaagattggctatgggcagctaccaattgcgattggcgaggtgggttggccaactgaaggggcaccaagtgcaaacctgactgcagcaagggcattcacccaaggcctgatcagtcatgttttaagcaacaaaggaactcctctacgtcctggggtgcctccgatggatgtatatcttttcagccttcttgatgaagagcagaagagcacattacctggcaatttcgagcgacactggggagttttctcatttgatggacaagccaagtaccctctgaatcttggattgggcagtccagttctgaaaaacgccaaagatgtgccatatcttcctccacggtggtgtgttgcgaaccctggtcgagatcttaacaatgtcgagaatcacctaaagcttgcttgtactatggctgattgcaccaccctctactatggtggctcatgcaatgctattggggagaagggcaacatctcatatgctttcaacagctactatcagctgcggaaacaggacgcccagagctgtgatttcgatggacttggcatgatcacttaccttgacccatccatcggtgactgccgctttcttgttggtatagatgacagtagaacatctacaatctattcttcaggtgactgttctcggaggcgctttggattgtggatcttggcgttcttggtaattgggttccttcagattggggtttatttgtgattttggttgtcgagagtcgactttaaacagctcccttgggcacacttcccatgtccttgtgaagtagcttcgtcaattggtggcttctagatgtaggaaaggggggacactgttagatgtacatgatcactagcttgttcttgggattgtgctgtccaattctgcaacttccgatcttcatgctaaggtggccaaaagctttctctagattgaaatgaagatggtagatgttgttgcaacctgattctgccattctttggtaccaccattttgatttggggcgaatatatttcttttgtagggggtatatgaggctatggtattgctgtggtcttaaagatacctcatgaaaccgctgaaattcatactggtggaatcacgagaaattgttttgtttg</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0326500, RefSeq:Os08g0326500