Os08g0328300

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Revision as of 12:56, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0328300| Description = ENT domain containing protein| Version = NM_001068094.1 GI:115475925 GeneID:4345288| Length = 6324 bp| Definition =...")
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Gene Name

Os08g0328300

Description

ENT domain containing protein

Version

NM_001068094.1 GI:115475925 GeneID:4345288

Length

6324 bp

Definition

Oryza sativa Japonica Group Os08g0328300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:14563962..14570285

Sequence Coding Region

14564284..14564311,14565251..14565462,14565571..14565680,14565760..14566012,14566125..14566334
,14566409..14566477,14568593..14568838,14568919..14568987,14569055..14569118
,14569715..14569830

Expression

GEO Profiles:Os08g0328300

Genome Context

<gbrowseImage1> name=NC_008401:14563962..14570285 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:14563962..14570285 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggattacaaccccgtggacagcagcggaactgatgatgatcttccaccgacatatcagaacagaggtgtaagaggcagtggacgtgttagtggtaatgggagagatattgttagcgctgttccatataatagaactaagccacagacagatatggaaacacaaattcatcagcttgagcaagatgcatattgttctgttcttcgtgcatttaaagcacaatctgatgctatttcatgggaaaaggaaggtcttatcactgaacttagaaaggaacttagagtgtctgacaaagagcacagggagttgttaaacagagtgaacggtgatgatatcattcaaagaataagggaatggagagagacaaaaggtgggcttcaggcagatatggtgaataatgctcaacgttcacatgatcgcgtgcccagccctaccacctccgctcgcaagaggcagaagacgtcacaatccatcccttctgcttctgtacctgtaccatctcctgctgtgcattcacagacactgactgccccaatgcaaccattgtcatcagcaacaaaaaaagtagctccacctggtacaaaaggcaaaaagactaagccaggccagaagataccaggtggctctgcaatcaagaccatgtcttctgctggccctagtggtaggggaccaattatgaataagaacctatcaggtggtcttcctactgaaccaatatcagtaaatccattaatcggacggaaggtcatgactcggtggcctgatgataatagcttttatgaggctgttataactgactatgatccacagctggatcgttatgcactggtttatgacataaatacagcagatgaaacctgggagtgggttgactttaaagagatggcacctgaagatattagatgggaaggtggcgaccctggaataatccagcaaggccgtggcgctactgttcatggtggtaagaagtcaagcagccgtaatggccccatgtcaggtcctggaagggggagcagagggccgcaaaagaacacatccaggaaagagtttccaccttcacaaaatggtgttgggaagaaaagctctgattgcatagaaatactccatacggagtcattaataaaggaggtggagcgggttttcagcgcaagcaaccctgatcctcttgaaatggagaaagcaaagaaagtgctcaaggagcatgaacaatctttgattgatgcaattgcaaggcttgctgaggcatctgatggcgaaagtgaagaaagggcacaacccttgcaacacaaccgtggatggagaaaccatcatggtggaaactatgcaaatgatatgactatcgatggtcacatggttggagatgctgatgccctgtaa</cdnaseq>

Protein Sequence

<aaseq>MDYNPVDSSGTDDDLPPTYQNRGVRGSGRVSGNGRDIVSAVPYN RTKPQTDMETQIHQLEQDAYCSVLRAFKAQSDAISWEKEGLITELRKELRVSDKEHRE LLNRVNGDDIIQRIREWRETKGGLQADMVNNAQRSHDRVPSPTTSARKRQKTSQSIPS ASVPVPSPAVHSQTLTAPMQPLSSATKKVAPPGTKGKKTKPGQKIPGGSAIKTMSSAG PSGRGPIMNKNLSGGLPTEPISVNPLIGRKVMTRWPDDNSFYEAVITDYDPQLDRYAL VYDINTADETWEWVDFKEMAPEDIRWEGGDPGIIQQGRGATVHGGKKSSSRNGPMSGP GRGSRGPQKNTSRKEFPPSQNGVGKKSSDCIEILHTESLIKEVERVFSASNPDPLEME KAKKVLKEHEQSLIDAIARLAEASDGESEERAQPLQHNRGWRNHHGGNYANDMTIDGH MVGDADAL</aaseq>

Gene Sequence

<dnaseqindica>323..350#1290..1501#1610..1719#1799..2051#2164..2373#2448..2516#4632..4877#4958..5026#5094..5157#5754..5869#agctcagctcggccccctcccctccccgctcccaccgcctcccgaatccggcctccaaatctcgccgggatccgccgcgcggccgcacggattcgcctcccggagccgcggctctgtcggcgcgggggcgggagaaggggggcctgctccggcccgggggacgccggatctgggtcggggggtttctcttcgggctcggaggaggaagggcaagtcacggtggcgttagtggtggtggtggttgttgcagcggcggcggttgatttgtgggtgtgattcgtgggcttcttggtgtcggtgtgcctggtgctggtgacgcgccatggattacaaccccgtggacagcagcggtgagcgcattagatttgggtggctagggtttttttttttttttgctactttcttagcttggaataggctacgcttctgggaagaattagtgtcaggattggcattattagggcattttctcctgttatcttgttttactgtattgttttttcttccatttcttgcagattgttagtgcttgttcactagcttgctggaatttgtttatcctagtaggttattatgggcaaatctcgatgataggttattgttttcagctgcttgtttgctgcagaggtcgtaactttggggttgttagtgaatgctgagttgaatgcttcgttaggattagttttggagcttcttttacaggtttctgccaagagaaggttaccattgttgttctaagaaaatgttcgacgcgacactgcaggctttatctaatagtagtaatatgagtgtaatggttgctccctgatttgatctgcggtgtttctagcagctgatgtgttgatggttccattgctacttgttattgaatttaacatgagcatagctcgtgatcagcacaaatgttctatagcttgcacaaacaagtcaacatgatattcttaacataatttacagttcagtaacacgtgtgtgtatattagagctctttttctttcagtataattttagtaccatatgccattgtgtctgggtttcagttcagctaaatggttgtacaatcattaataaatagctaaacccttaacttgtgagcatattatctttcatttccaatttgatttgtgttgctcaattgactagcatgtgaaatggttgtacaatcattaagaaatagctaaacccttaacttgtgagcatataatcttatcagtaactggcttaaatcagtctaaatgtataataaaaaaatcgagattgtgtgctaagcaatttattatttgttgcaggaactgatgatgatcttccaccgacatatcagaacagaggtgtaagaggcagtggacgtgttagtggtaatgggagagatattgttagcgctgttccatataatagaactaagccacagacagatatggaaacacaaattcatcagcttgagcaagatgcatattgttctgttcttcgtgcatttaaagcacaatctgatgctatttcatgggtaaaacaccacttaactctgtcattcttcatcttcatttggtgtaatcgttagcagttcttttttccgcaaaactgaccaaaagacaattttgaattcaacttctaggaaaaggaaggtcttatcactgaacttagaaaggaacttagagtgtctgacaaagagcacagggagttgttaaacagagtgaacggtgatgatatcattcaaagaataaggtataatattgggcagatacccatttttaatggcacaatgcatcttttgttttcttaacttcagacatttttattcaagggaatggagagagacaaaaggtgggcttcaggcagatatggtgaataatgctcaacgttcacatgatcgcgtgcccagccctaccacctccgctcgcaagaggcagaagacgtcacaatccatcccttctgcttctgtacctgtaccatctcctgctgtgcattcacagacactgactgccccaatgcaaccattgtcatcagcaacaaaaaaagtagctccacctggtacaaaaggcaaaaagactaagccagtaagtgatggttgaaatctgctgagacaaaccctaagacttctctaattgtgatgttgtaatatgaccttatttatttgttttttttttttttttgcaattttgcttgaagggccagaagataccaggtggctctgcaatcaagaccatgtcttctgctggccctagtggtaggggaccaattatgaataagaacctatcaggtggtcttcctactgaaccaatatcagtaaatccattaatcggacggaaggtcatgactcggtggcctgatgataatagcttttatgaggctgttataactgactatgatccacagctggtatgttttattcatacgtgattaaatttatctttgtttgaagtacttctgatgtctgttctcattaatcataggatcgttatgcactggtttatgacataaatacagcagatgaaacctgggagtgggttgactttaaagaggtaaattcccttttattgtgattgacttctgatacttcacgacttagtttgctgttggtatggtactaggctgtgttcgtttggtgaggttgggaactcagctcctctgcacgcaaaacggagcgactcattagcgcatgattaattaagtatttgctattttcttgaaaaatgaattaatatgattttttaaagcaactttcatatagaaactttttgcaaaaagtgcaccatttagcagtttgaaaagcgtgcgcgcggaaaatgagggtggtgagttgggaactctctgaaaggaacacagcctaatgcaccaacgaaatacgaactttgcaaaagctagaaaaatgacatgtcatgacatttaaaatttaagtgggaaactattgtatagcttggtatctatgtagttatataattaatatggaaaactatgtttgttatatggatgcttttttaccttcaagtggatagaacaagaagatgactgttatatgttttcatcttgttataacctattccctctgttcctctttaattttcaccatgcacaagacacaaatactgatacttagcattttccctatatatgactaaaatgccctttgctttattttattggtaaaagtacagaaggtgcactgctcaacgttttacatgctcctaccgctgtactaatggtgcctggctaggtacaacaaattaaaaatcagatactagaagcacccaccctgcatctgatgttagggtgtgtagcacgggggcaaaatttgaaattagtgtgttggaaaacgtggagtgacatgtaacatggaacaaaaataaactagaaagggggagcgattacttgcagataatatgactttattctattgttaactgtaaaagaaaaggcaattatgctacttggatttttcattgatgtggaactatgaccctcagatatcctgtttgttttccttataagaagttttttttcgctgaatatcaacaatgaacaaatattttcattgctgaacttttgaagggccaatatattgtgttttcagattccattgtatttgtgttctggtagtttgcttttggagttaattgcctcagggtgcacagacttgtttggtggatgcgaataggtgcaacaacatgtgaagcgccagttctggtgcaataacttgcttactttgtggaaatcagggtcaaaatgcaagcatattagcgcttttcaatgctgactagcatgccatatcagcttgtatgtaagtaggacgcatgtagtattgtcgttttgcataaaaccacccgtgcttgtctgttatattccccattgctctggtcctctgccaaaccgttttgttgacagccctttgatggctgcgaaggaggactgggctgaagagacaaggcatatgattgatcaggaattctcaataggtgacctgcagatcgaatcactgcaaggatgctagcatagcgatcagcatggtgccatgtcaacttgggtggcaaaccttgttagcagagcaggaagacgctggcactccaatggcaaagcgccccatcctctagcatacaatgttgatttcttgccatcacgattcgaatacagttagtgatgaactgcaagtgtgtcctcactcactggctcactggctcactgctgcatccatatcacgctacttcagctcaataatcctgcgtggctctttttggccctagttccaacagtctaatcaaattgttgcactggatcaagcattttgcttgttggtgtacctatttgtgccctccaaacaagttcatgcaccatgggcttagcttaccctttcttttctttccaacatctagtatttaaaaatcttagtatttcaacaccaaatcaaaactttgtattatcttataggtttatgcaaatttccttcttttggagggcacaatatttaattattttgagttcaattctagcgagctagatgatattagtttttttgtttctgcattagcataggcagcacaatatatgtatttctttatatgtgtttgacaaaagttaccattgtatttaagcaagaaacaaggccttttaatatgttcgttatttcttgtccttgagtgcagatggcacctgaagatattagatgggaaggtggcgaccctggaataatccagcaaggccgtggcgctactgttcatggtggtaagaagtcaagcagccgtaatggccccatgtcaggtcctggaagggggagcagagggccgcaaaagaacacatccaggaaagagtttccaccttcacaaaatggtgttgggaagaaaagctctgattgcatagaaatactccatacggagtcattaataaaggaggttagtttggaagaaactttgcctgtttgtttagaccatgcaagtgttatctgctctatgatgataatctacttatctaggtggagcgggttttcagcgcaagcaaccctgatcctcttgaaatggagaaagcaaagaaagtgctcaaggtaaacatggaaatgtaaaatattatggttaggtgcccttaaacttaactaatagacattattgcaggagcatgaacaatctttgattgatgcaattgcaaggcttgctgaggcatctgatggcgaaagtggtaaatactagtctttgttgcctgtctgttccaatagaaatgacttgactttctttctaagctggagaaaccatccaccgttacctaggatgattgcctaaaaaatcaaggatcaagccagtgtctagtgcatagcggttcctagatgtcacctaggaccaactcgactagtgaatttcaagcaattagcaagcatattacataaaaattagacatgagaacactaaaatagcagcacaagagcccctagggcatgttagcctcctttcactatctaatgcctaattgcgtggttatatgtggtgcctatgcaatgcctagggctgacttttatagcactgctcaaaatataggcatttcaagtttaaccatgcttgaacaggaagcactcgttttagctatcttctgtaaatcatcacactaggcactttcaatatcatactgtagatgatcttaccagaacttctatttgtggtgtaagtgctctccgtgagcactaacagaaagtagctttggcattcagtaaaaaagaaattaacagaggtgcatcaatttatttattgacacgctcctctcttgtcatatggttgaagcagaagaaagggcacaacccttgcaacacaaccgtggatggagaaaccatcatggtggaaactatgcaaatgatatgactatcgatggtcacatggttggagatgctgatgccctgtaaacaattactgaactgtatacagaaccctttttttatctattgtataacttcaatgctgatttattctagattagcactaggttcaaaagtatcctctaattgtttcaaatgagtttatctgttatgatgggcctctcgaattgtggactttcggaaaatcaatattggtgagaggagagcgttttgtagaattgtagtctagcagatcatgatgacactgtaaatttagatgtggagatatttttggtgtcgtactactttcagatgtgactactcactggagatgtatgttgttttgtactcgctagcaagcagaacacgcatttttttttgtttttttttgcaatgtttctttgagccatggttgatactttttagaaagggtaatttggaaccatgccattataatttttcaaagtttgagatatgccatcggtatctcaatgtttgttatg</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0328300, RefSeq:Os08g0328300