Os09g0423500

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Revision as of 07:26, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0423500| Description = Peptidase A1, pepsin family protein| Version = NM_001069747.1 GI:115479236 GeneID:4347098| Length = 2158 bp| Defini...")
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Gene Name

Os09g0423500

Description

Peptidase A1, pepsin family protein

Version

NM_001069747.1 GI:115479236 GeneID:4347098

Length

2158 bp

Definition

Oryza sativa Japonica Group Os09g0423500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:15998395..16000552

Sequence Coding Region

15998421..15998550,15999141..16000432

Expression

GEO Profiles:Os09g0423500

Genome Context

<gbrowseImage1> name=NC_008402:15998395..16000552 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:15998395..16000552 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgtggggggcttgcgctctgctcctcctcctcctggtacttggtgcgggaggaggaggaggggtgcattgcctggaggtgacgaggagcaggagagccttgcagaggaggcaccacctgaggtcaagagcagagagtggcgccaccatactggagctcaggcaccatggcggcggcggcggcggcggctcggggaagagcggcgggaggagcagggaggaggagctcggcggcctcttctcctccgacgccgcgcgcgtctcgtcgctgcagcgtcgcgcaggcggcgggtcttgggcggaggacgaggcggcggcggcggcggcgaccgggcgggtgcccgtcacgtccggggcgaggctacggacgctgaactacgtggccaccgtggggcttggcggcggcgaggcgacggtgatcgtggacacggcgagcgagctcacctgggtgcagtgcgcgccgtgcgcgtcgtgccacgaccagcagggcccgctgttcgacccggcgtcgtcgccgtcctacgccgtgctgccgtgcaactcctcctcctgcgacgcgctgcaggtggccaccggctcggcggccggggcgtgcggcggcggcgagcagccttcctgcagctacaccctcagctaccgtgacggctcctactcccagggcgtcctggcgcacgacaagctgagcctcgccggcgaggtcatcgacggcttcgtgttcggctgcggcaccagcaaccaggggccattcggcggcacctccggtctgatgggtctaggccggagccagctctcgctgatatcacaaaccatggatcaattcggtggtgtcttctcatactgcctacctctcaaggagtcagaatcatcagggtctctcgtcctcggcgacgacacctcggtgtaccggaattcaaccccaattgtgtacacaaccatggtttccgacccggtgcaagggcccttctactttgttaacctgaccgggatcaccattggcggccaggaggtagaatcttcagctggcaaggttatcgtcgactcgggaacgatcatcacgagcctcgtgccttcggtgtacaatgcggtcaaggcagagttcttgagccagttcgcggagtatccgcaagcgccggggttctcgattcttgacacttgcttcaacttgacagggttcagagaagtgcagattcctagcctgaagtttgtgtttgaaggcaatgtggaggtggaggttgattccagtggagtgctctactttgtcagcagtgattcttctcaggtttgcttggctctggcctccctgaaatctgagtatgaaacttcaatcattggtaattaccagcagaagaatctgagggtcatatttgacactctaggatctcaaattggatttgcacaagagacttgtgattatatttaa</cdnaseq>

Protein Sequence

<aaseq>MAWGACALLLLLLVLGAGGGGGVHCLEVTRSRRALQRRHHLRSR AESGATILELRHHGGGGGGGSGKSGGRSREEELGGLFSSDAARVSSLQRRAGGGSWAE DEAAAAAATGRVPVTSGARLRTLNYVATVGLGGGEATVIVDTASELTWVQCAPCASCH DQQGPLFDPASSPSYAVLPCNSSSCDALQVATGSAAGACGGGEQPSCSYTLSYRDGSY SQGVLAHDKLSLAGEVIDGFVFGCGTSNQGPFGGTSGLMGLGRSQLSLISQTMDQFGG VFSYCLPLKESESSGSLVLGDDTSVYRNSTPIVYTTMVSDPVQGPFYFVNLTGITIGG QEVESSAGKVIVDSGTIITSLVPSVYNAVKAEFLSQFAEYPQAPGFSILDTCFNLTGF REVQIPSLKFVFEGNVEVEVDSSGVLYFVSSDSSQVCLALASLKSEYETSIIGNYQQK NLRVIFDTLGSQIGFAQETCDYI</aaseq>

Gene Sequence

<dnaseqindica>27..156#747..2038#gaggtgaggtgaggtgaaggtcagtgatggcgtggggggcttgcgctctgctcctcctcctcctggtacttggtgcgggaggaggaggaggggtgcattgcctggaggtgacgaggagcaggagagccttgcagaggaggcaccacctgaggtcaagtgagttctctttgcattgatcccttctttgctcatcgccttcttcttcttcttctctccttctttcttgatgctcttcgatggcatgggattgggtagctagctagctagaacggattccatgcttttcattgcttggtgttcaggcttcagacaccatagttttctctgaacatgcataggtgttgacgtgttgttgtaacacgataatctgcaatgtgttggtttgatggtgcttgcgttcttgattagttaatgattactgctcccagttttacatcgtagtgttgccaatggggggaaaaatgacccgttttggcaagaaaagtggaggcgcgtgaattgccaagatgtgagtgtgactgcgccatgaatgtgatgagctccttctatatctatggtgttcgttggtcagcggctcacccggggcgtttgccaaaagtagcacgcctccaatgtagccttcgaccatgggaagaattgcataaacaatgatgggaatagtagctagtgagctggtagattgatttccatgtggttggtgaatggtggtgactcggactgatcgatgatgctttgaggtttttcaggagcagagagtggcgccaccatactggagctcaggcaccatggcggcggcggcggcggcggctcggggaagagcggcgggaggagcagggaggaggagctcggcggcctcttctcctccgacgccgcgcgcgtctcgtcgctgcagcgtcgcgcaggcggcgggtcttgggcggaggacgaggcggcggcggcggcggcgaccgggcgggtgcccgtcacgtccggggcgaggctacggacgctgaactacgtggccaccgtggggcttggcggcggcgaggcgacggtgatcgtggacacggcgagcgagctcacctgggtgcagtgcgcgccgtgcgcgtcgtgccacgaccagcagggcccgctgttcgacccggcgtcgtcgccgtcctacgccgtgctgccgtgcaactcctcctcctgcgacgcgctgcaggtggccaccggctcggcggccggggcgtgcggcggcggcgagcagccttcctgcagctacaccctcagctaccgtgacggctcctactcccagggcgtcctggcgcacgacaagctgagcctcgccggcgaggtcatcgacggcttcgtgttcggctgcggcaccagcaaccaggggccattcggcggcacctccggtctgatgggtctaggccggagccagctctcgctgatatcacaaaccatggatcaattcggtggtgtcttctcatactgcctacctctcaaggagtcagaatcatcagggtctctcgtcctcggcgacgacacctcggtgtaccggaattcaaccccaattgtgtacacaaccatggtttccgacccggtgcaagggcccttctactttgttaacctgaccgggatcaccattggcggccaggaggtagaatcttcagctggcaaggttatcgtcgactcgggaacgatcatcacgagcctcgtgccttcggtgtacaatgcggtcaaggcagagttcttgagccagttcgcggagtatccgcaagcgccggggttctcgattcttgacacttgcttcaacttgacagggttcagagaagtgcagattcctagcctgaagtttgtgtttgaaggcaatgtggaggtggaggttgattccagtggagtgctctactttgtcagcagtgattcttctcaggtttgcttggctctggcctccctgaaatctgagtatgaaacttcaatcattggtaattaccagcagaagaatctgagggtcatatttgacactctaggatctcaaattggatttgcacaagagacttgtgattatatttaacatgatttgatttggagggggaagggggccatgagctatgtgaatatccctatacctggagatctgttttgagattacttctggtaattggcaaatggtagtacagtattagttattgtc</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0423500, RefSeq:Os09g0423500