Os08g0334900

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Revision as of 12:57, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0334900| Description = Xyloglucan fucosyltransferase family protein| Version = NM_001068109.1 GI:115475955 GeneID:4345303| Length = 1926 bp...")
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Gene Name

Os08g0334900

Description

Xyloglucan fucosyltransferase family protein

Version

NM_001068109.1 GI:115475955 GeneID:4345303

Length

1926 bp

Definition

Oryza sativa Japonica Group Os08g0334900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:15064012..15065937

Sequence Coding Region

15064105..15065895

Expression

GEO Profiles:Os08g0334900

Genome Context

<gbrowseImage1> name=NC_008401:15064012..15065937 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:15064012..15065937 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagatgagcggcgccggagcgggaggcgtgccgacaaagctggagcacgacgacgctgcggctgtggcggcggagcgggagccgtgcggcggcggcgcgccgaggagggaggagaaggagcggtggcgacgggtgctggtcgtcggctgcctggtggcgctgctcctcttcgcgttcttcgtcctcgggcgggagagcgcgtcggaggttctgcagatcgcgagctccaagctgtccgcgatgaacggagggtttacgacgaaaaacccttctcatggcggtggcgccgccaagcatgccgacgagctcctcggcgggctgctggcgccgggcatggaccggcggtcgtgccggagccggtaccaggcggcgcattactacaagcacttcccctacgcgccgtcgccgcacctcctggacaagctgcgcgcctacgaggctcggcaccggaggtgcgcgccggggacgccgctgtacaaccgctccgtcgagcagctccggtccggccgcagcgccggcggcgtggagtgcaactacgtcgtctggctccccttcgacggcctcggcaaccgcatgctgtccatggtgagcggcttcctctacgcgctcctcaccgaccgcgtcctcctcgtcgacctgccccatgactcctccgacctcttctgcgagcccttccccggcgcgacatggctgctcccgccggacttccccgtcgccaacctcttcggcctcgggccgaggcccgagcagtcgtacacgaccctcctgaacaagaagaagatcaccgccgtcgtcaacaacgacgacgacccggcatcaaagaacgccacggccgcgctgccgccgccgccggcgtacgtgtacctgagcctagggtaccagatggcggacaagctcttcttctgcggcgacgaccagcgcgcgctcgccaaggtgaactggctgctgctgtacagcgacctctacttcgtcccgtcgctctactccgtcgccgagttcaacggcgagctccggcggctgttcccggcgaaggagagcgcgtgccacctcctcgcccgctacctcctccacccgaccaacgccgtgtggggcatggtgacacgctactacaactcctacctagcccaggcaagccgccgcatcggcgtccagatcaggatgttcaacttcgcctccatccccgtcgacgacctctacaatcagatcctcacctgctcccgccaagaacacgttctaccggaaaccaccaccgacaacgacaacgacgacgatcttgccacggcgtacgacagcaacagcagcaatggcagcggtggcggcaactactcggccatcctgatcgcgtcgctgtacccggactactacgagaggatccgggcgacgtactacgagcacgcgacgaggggaagggtgagggtgggggtgttccagccgacgcacgaggagaggcaggcgacgcagaggctgttccacaaccagaaggcgctggcggagatcctcctgctggggttctccgacgagctcgtcacgtccgggatgtcgacgttcgggtacgtgggcagcagcctcgcgggcgtgcggccgacgatcctgatgcccgcgcacggccacagggtccccgcgccgccgtgccggcgagccgtgtccatggagccgtgcaacctcacgccgccgcgggtgggcgaggcggagtgccgggagatggccgccgtcgtcgacaaggaggacgtggcccggcacgtcaaggtctgcgaggactttgatagaggggtgaagtttttcgattga</cdnaseq>

Protein Sequence

<aaseq>MEMSGAGAGGVPTKLEHDDAAAVAAEREPCGGGAPRREEKERWR RVLVVGCLVALLLFAFFVLGRESASEVLQIASSKLSAMNGGFTTKNPSHGGGAAKHAD ELLGGLLAPGMDRRSCRSRYQAAHYYKHFPYAPSPHLLDKLRAYEARHRRCAPGTPLY NRSVEQLRSGRSAGGVECNYVVWLPFDGLGNRMLSMVSGFLYALLTDRVLLVDLPHDS SDLFCEPFPGATWLLPPDFPVANLFGLGPRPEQSYTTLLNKKKITAVVNNDDDPASKN ATAALPPPPAYVYLSLGYQMADKLFFCGDDQRALAKVNWLLLYSDLYFVPSLYSVAEF NGELRRLFPAKESACHLLARYLLHPTNAVWGMVTRYYNSYLAQASRRIGVQIRMFNFA SIPVDDLYNQILTCSRQEHVLPETTTDNDNDDDLATAYDSNSSNGSGGGNYSAILIAS LYPDYYERIRATYYEHATRGRVRVGVFQPTHEERQATQRLFHNQKALAEILLLGFSDE LVTSGMSTFGYVGSSLAGVRPTILMPAHGHRVPAPPCRRAVSMEPCNLTPPRVGEAEC REMAAVVDKEDVARHVKVCEDFDRGVKFFD</aaseq>

Gene Sequence

<dnaseqindica>94..1884#aactcaagcgccaacttagtacaaaattaagcctcgacgcggccgctcccgatcggccatgcgcgaacgtgcagtggtggtggtgcatcgacgatggagatgagcggcgccggagcgggaggcgtgccgacaaagctggagcacgacgacgctgcggctgtggcggcggagcgggagccgtgcggcggcggcgcgccgaggagggaggagaaggagcggtggcgacgggtgctggtcgtcggctgcctggtggcgctgctcctcttcgcgttcttcgtcctcgggcgggagagcgcgtcggaggttctgcagatcgcgagctccaagctgtccgcgatgaacggagggtttacgacgaaaaacccttctcatggcggtggcgccgccaagcatgccgacgagctcctcggcgggctgctggcgccgggcatggaccggcggtcgtgccggagccggtaccaggcggcgcattactacaagcacttcccctacgcgccgtcgccgcacctcctggacaagctgcgcgcctacgaggctcggcaccggaggtgcgcgccggggacgccgctgtacaaccgctccgtcgagcagctccggtccggccgcagcgccggcggcgtggagtgcaactacgtcgtctggctccccttcgacggcctcggcaaccgcatgctgtccatggtgagcggcttcctctacgcgctcctcaccgaccgcgtcctcctcgtcgacctgccccatgactcctccgacctcttctgcgagcccttccccggcgcgacatggctgctcccgccggacttccccgtcgccaacctcttcggcctcgggccgaggcccgagcagtcgtacacgaccctcctgaacaagaagaagatcaccgccgtcgtcaacaacgacgacgacccggcatcaaagaacgccacggccgcgctgccgccgccgccggcgtacgtgtacctgagcctagggtaccagatggcggacaagctcttcttctgcggcgacgaccagcgcgcgctcgccaaggtgaactggctgctgctgtacagcgacctctacttcgtcccgtcgctctactccgtcgccgagttcaacggcgagctccggcggctgttcccggcgaaggagagcgcgtgccacctcctcgcccgctacctcctccacccgaccaacgccgtgtggggcatggtgacacgctactacaactcctacctagcccaggcaagccgccgcatcggcgtccagatcaggatgttcaacttcgcctccatccccgtcgacgacctctacaatcagatcctcacctgctcccgccaagaacacgttctaccggaaaccaccaccgacaacgacaacgacgacgatcttgccacggcgtacgacagcaacagcagcaatggcagcggtggcggcaactactcggccatcctgatcgcgtcgctgtacccggactactacgagaggatccgggcgacgtactacgagcacgcgacgaggggaagggtgagggtgggggtgttccagccgacgcacgaggagaggcaggcgacgcagaggctgttccacaaccagaaggcgctggcggagatcctcctgctggggttctccgacgagctcgtcacgtccgggatgtcgacgttcgggtacgtgggcagcagcctcgcgggcgtgcggccgacgatcctgatgcccgcgcacggccacagggtccccgcgccgccgtgccggcgagccgtgtccatggagccgtgcaacctcacgccgccgcgggtgggcgaggcggagtgccgggagatggccgccgtcgtcgacaaggaggacgtggcccggcacgtcaaggtctgcgaggactttgatagaggggtgaagtttttcgattgatcacgttctctcattgaattttgagtcgatagctggttcttg</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0334900, RefSeq:Os08g0334900