Os09g0423800

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Revision as of 07:26, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0423800| Description = Similar to AP2-1 protein (Fragment)| Version = NM_001069750.1 GI:115479242 GeneID:4347101| Length = 4655 bp| Defini...")
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Gene Name

Os09g0423800

Description

Similar to AP2-1 protein (Fragment)

Version

NM_001069750.1 GI:115479242 GeneID:4347101

Length

4655 bp

Definition

Oryza sativa Japonica Group Os09g0423800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:16018644..16023298

Sequence Coding Region

16018644..16018759,16018885..16018967,16019051..16019059,16019214..16019302,16019876..16019949
,16020093..16020143,16020249..16020325,16022227..16022825

Expression

GEO Profiles:Os09g0423800

Genome Context

<gbrowseImage1> name=NC_008402:16018644..16023298 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:16018644..16023298 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>agcagcggtgtcgccgccgccgccgccgcggcggcggtgaagccgaagcgcacgcggaagagcgtcccccgcgagtccccctcccagcgcagctccgtctaccgcggcgtcacccggcaccggtggacggggcggttcgaggcgcacctgtgggacaagaacagctggaacgagtcccagaacaagaagggcaagcaagtttacctcggggcgtatgacgacgaggaggcagcggcgagggcgtacgatctggcggcattgaagtactggggacccgacaccatcctcaacttcccgttgtctgcatatgaaggtgagttgaaagaaatggaggggcaatcaagggaagagtatattggatccctaaggaggaaaagcagtgggttctcaagaggagtatcgaagtaccgaggcgttgcaagacaccatcacaatgggagatgggaggcccggattggccgtgtttttggcaacaagtacctctatctcggtacttacgcgacgcaggaggaggcggcaatggcgtacgacatggcggccatcgagtatcggggcctgaacgccgtcaccaacttcgacctcagccggtacatcaagtggctccggcccggcgccgacggcgcgggcgctccccagaatcctcaccccatgctgggtgctctgtcggcgcaggatctcccggcgatcgacctcgacgccatggcgtcgtcgttccagcacgacggccatggcgccgcggcggcggcggcacagctgatcccggcaagacattcgctcggccacacgccgacaacgtcggcgctcagcctgctgctgcagtcgcccaagttcaaggagatgatcgagcggacgtcggcggcggagaccaccaccaccagcagcacaaccacctcctcctcgtccccgtcgccgccgcaggcgaccaaggacgacggcgcctcgccgcagtgcagcttcccggaggacatccagacctacttcggctgcgccgccgaggacggcgccgccggcgcgggatacgccgacgtggacggcctgttcttcggcgacctcgccgcgtacgcgtcgccggcgttccacttcgagctggacttgtga</cdnaseq>

Protein Sequence

<aaseq>SSGVAAAAAAAAVKPKRTRKSVPRESPSQRSSVYRGVTRHRWTG RFEAHLWDKNSWNESQNKKGKQVYLGAYDDEEAAARAYDLAALKYWGPDTILNFPLSA YEGELKEMEGQSREEYIGSLRRKSSGFSRGVSKYRGVARHHHNGRWEARIGRVFGNKY LYLGTYATQEEAAMAYDMAAIEYRGLNAVTNFDLSRYIKWLRPGADGAGAPQNPHPML GALSAQDLPAIDLDAMASSFQHDGHGAAAAAAQLIPARHSLGHTPTTSALSLLLQSPK FKEMIERTSAAETTTTSSTTTSSSSPSPPQATKDDGASPQCSFPEDIQTYFGCAAEDG AAGAGYADVDGLFFGDLAAYASPAFHFELDL</aaseq>

Gene Sequence

<dnaseqindica>1..116#242..324#408..416#571..659#1233..1306#1450..1500#1606..1682#3584..4182#agcagcggtgtcgccgccgccgccgccgcggcggcggtgaagccgaagcgcacgcggaagagcgtcccccgcgagtccccctcccagcgcagctccgtctaccgcggcgtcacccggtaactttttataacgaatcattaaccgagctaatcgatcgagccaccgtgttaattagattgctcattgctcctccggccggccgctgatcgatcgccgccgccgcgtggtttcggacgtgcaggcaccggtggacggggcggttcgaggcgcacctgtgggacaagaacagctggaacgagtcccagaacaagaagggcaagcaaggtacgcttaatcactgatataatcaccactccctgcttaatcactcgcctcaactaatccctctcttctgttggtgcatgcagtttacctcggtacgtacgtgaggctctcgggtcatggccttggcatgatcacacagccagccagttgatccactatttccaaaaaaaaagaaaaaattagctggggtgttagtgataagtgtgtgattagcgtggtggtgcgtccgattgttgttcgttgcaggggcgtatgacgacgaggaggcagcggcgagggcgtacgatctggcggcattgaagtactggggacccgacaccatcctcaacttcccggtaggaaaatttactcccctgcacattccaacagcatgttgttgcacagtagcagtcagtagagtagatcagcagcacactgcactgccacactctgtgtgtatgtgtgtgaggcagtgtgtcccatggtggatggatctccggcttgaattccccgcacctcccgcgagttcaattcgatcatgggctacttcatgatccccttaaaagtacacctatacttgataagtcgtcgaataaatgtttccgatgctgtatcataggagcgcaatctatgccttgttagaatatagcctgtgcttcatgtttggtagaaaaatgataattttattgtcgttgttagtagtagtagcgagggtgttttttttttttaaaaaagctcatgtctttattacgatttaaccgattaaatacaaagtacatgaatgatgacaatctctctttgggacatgagtgatgagggtactggtttttaccatctgataaagcgcactgcatctgcgcaaaatctttgcgctttacattttttcgtgacatttgtataactatcacgtttattattatgatgtacagttgtctgcatatgaaggtgagttgaaagaaatggaggggcaatcaagggaagagtatattggatccctaaggaggtaattctcaagtagacaaacatgcaatgaatttctctaaaagaaaattctccgtgaagaaattaacggaattaaatcccctgaaaactaaattagcaattacaactcataaccatatggttcatatgtatgatttttcacaggaaaagcagtgggttctcaagaggagtatcgaagtaccgaggcgttgcaaggtaatcattagaagctccaaattactacactccaaatggaatccaaaatatgtaagacaacttgactgaaaatttctcatatcacaaattcgtgcaaatattcagacaccatcacaatgggagatgggaggcccggattggccgtgtttttggcaacaagtacctctatctcggtacttacggtatgttaatttcttgccacaaaatcactagtacctctgaaaacaaaataccaggaaaaatttaacagcacaacagccttataagttataaatgcctagatttccttcacccataaactctattcctgtcaaagttcttgaaagccaaatctgagtagtattaagtgcaagtcaccggagttagcttctgtctacttttctggcggtgcacatcgccatagtgacggatctgccccttgcattgaaccatatcacctgacattgtacaaattccccaactaatttctccatccagtgattgtaatggctggatcctgtcaatagagattagattgtgatgtatgtcactgtgttcagttgctctcatgtgtcaacaccaaaatctccggtccaaataattaggccacgattgcaacaaatgatttccatatgcatttgtgaggaacatcacatctcacatgagttttgcatcaaaattcttacataatccttgctttccaagtgggaacatgcatggagaaagcagaaagagaaactaagggtagaaacacgctgatatacggtttactctttttcacattatataaatactttcctgtggtcaggaaaaaggcatgccatcgtctcagatagtgatatggtattcaaaaaacaattttgatcaccaaattatattttatttgtgaagccagaagcccagaaagacaacatattttgaaatgatttaaaggcaatctatgcatacgatttaatatcaaaatggcatggacacttgaaagctccaaaagtttgtctagatgtatacctggaaagaaaaagataactttttaactggagggaacgaactgtaaaacatccatccccgtaaattcttccatagctaattaagaatgaaactccacacaaatgaaaagagagaaactagtatgtggtgcccccactaatttaaatacaccaggagttgctcaatggggcaaggatggggatgatctatatcgaagtagttgagctagcaatggcaggaagtgaagtgaggctatttaggacatttcccggcaatttaaatcccaagttagttggggattagatgcaatgactcaatgaggtagaccccatgaagaccaacttccaacggcccctctgttctgtgtgcaccagttgaaggctacacatccattaatccaaacattagcataattaatacataccaaagatcagaatggagccatacagacacgatggatatggtgtgagcttgtcatgccacacactgcacacacaacaaaagtgtatagtatcactacatcacccctgttgcctcccattggagaacataataaataaatttaggaactaggagtatttaagaaatgtgggaagaaaggaataagtctgaaaataaaaaaaacaatggtatttttttttcagaaatggtcttcttaaactaaatttacccttgaaattaccaaatcttgaaaaaaaaaatcacaataggttagttacgaagtgtttggtttggtaccaaaagtcaatcttgccaaaatttgtcgttgctaaaaaaaaagataccctccgttttataactcaaattataagtcgttttgattttttttgacttaatcgagtttatagaaaaatttagcaacattaaaacaccaaataagttttattaaatttttttagaatatgtttattttgtgttaaaaatattactatactttttgataagtttgattaaattttaaaaagtttaattagaaaaaacttaaagcgacttacaacaggtgctcatgggaatcttgaaatgaggaagtttggggtgtcgaatagccgatgctaccaacttcgtactagcaatctcgtcgtcagccattgtctgagcgaatctttcttgactgcagcgacgcaggaggaggcggcaatggcgtacgacatggcggccatcgagtatcggggcctgaacgccgtcaccaacttcgacctcagccggtacatcaagtggctccggcccggcgccgacggcgcgggcgctccccagaatcctcaccccatgctgggtgctctgtcggcgcaggatctcccggcgatcgacctcgacgccatggcgtcgtcgttccagcacgacggccatggcgccgcggcggcggcggcacagctgatcccggcaagacattcgctcggccacacgccgacaacgtcggcgctcagcctgctgctgcagtcgcccaagttcaaggagatgatcgagcggacgtcggcggcggagaccaccaccaccagcagcacaaccacctcctcctcgtccccgtcgccgccgcaggcgaccaaggacgacggcgcctcgccgcagtgcagcttcccggaggacatccagacctacttcggctgcgccgccgaggacggcgccgccggcgcgggatacgccgacgtggacggcctgttcttcggcgacctcgccgcgtacgcgtcgccggcgttccacttcgagctggacttgtgacggcggcgccgccgctgccgcagccgagcagtgtcagcttgtgcctcgccagtagcccaacggccacggcgcaatacagttacaggccgttaattaaattctttaattgggtggatttggtccataggagaatgaccaaaaaaagagaaggaacagacgaacagacaaatggaaggcaggcaagaatgcaagatactcttatagcacaagctagtgcttacagagttaatgacagtattatagtgacaagctgaagaccgagaattacttcaagattgattttcttaccttgacaatccgaatgagagagagagagatagtgggtgtgtgacagtgtgaggagaggagattgtttcatttttgcttcatccctgacaaaatgaacaactatatagtatcttttttttttgagaacgactatatagtatctataatctacataaatacttgatagaaggatttgtgagtttctg</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0423800, RefSeq:Os09g0423800