Os08g0343600

From RiceWiki
Revision as of 12:57, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0343600| Description = Similar to Nectarin 5 (Fragment)| Version = NM_001068130.2 GI:297608432 GeneID:4345331| Length = 1690 bp| Definitio...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os08g0343600

Description

Similar to Nectarin 5 (Fragment)

Version

NM_001068130.2 GI:297608432 GeneID:4345331

Length

1690 bp

Definition

Oryza sativa Japonica Group Os08g0343600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:15598431..15600120

Sequence Coding Region

15598431..15600006,15600035..15600120

Expression

GEO Profiles:Os08g0343600

Genome Context

<gbrowseImage1> name=NC_008401:15598431..15600120 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:15598431..15600120 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcgcaacaccaccattctgcttcttgccctcctcctcaccttgctctcctcgtcctcgacatggccgccaccgttgacaggcgtagcagcggcgggctcgctgccgtcgtgcctcctcgccaccggcgtccgcaacttctccctcgccgggtcgccggcctacgacgcgctgctcaacttctccatccagaacctccggttcgcgctcccggccgccggcgcggtgcccaggccggcggccgtcgtgctcccgcgcggccggagcgagctcacgagcgcggtgctgtgcgcgcgccacgcctcgctgcgcatccgcgtgcgcagcggcgcgcacagctacgagggcctctcgtacaccgtcggcgacggcggcgacgacgccgaccgcgtccgcttcgtggtgatcgacctcacgaggatgaacagggtgcgtgtcgacgccgcgtcggccaccgcgtgggttgagtccggcgcgacgctcggcgagatctactacgccgtcgcgtcgtcgtcgtcctcccttgcgttcccggctgggtcgtgctcgaccgtcggagcaggcgggcatatctccggcggcgggttcgggctgctgtcgcgcaaattcaagctcgccgccgacaacgtgctggacgcgatcctcgtcgacgcggacggcagggtcctggaccggagctccatgggcgagaacgtgttctgggcgatccgcggcggcggcggcggcggctggggcgtggtctacgcctggaagctccggctcgtccaggttccgaacaccttgacggcgttcacgccgaaaaggaccggttcggtggacgccatcgccgggctagtgcatcggtggcagtacgtcggctcagctctgcccgacgagttttacctctccgtcttcctcaccatcggcggcgccagctcgtcgtcgccatcacgagatggaaacgtgacggtgtccttcacagggctggttcttggttccaaggagctggccatgtcggtgctgagcgagaggttcccggagctgggcctcgccgagccggagatgtcggagatgagctgggtggagtcggcggcgaggttcgccgggctgagctcgacggaggagctgaccagccgcgcctccaggacgaagcactacgccaagagcaagtcggactacgtgcggtcgcccatcgcgaggggcgccgtggcggcgatcctccggtacctcgccggcgagccggcggggtacgtgatcctcgacccctacggcggcgccatggcgcgtgaggggagcggcgacacgccgttcccgcaccgcgccggcaacctgtacagcgtccagtacggcgtgacgtgggaggccggcgacgacggcggcggcggcggcggcggcggcgaggcgcgcatggcgtggctgcgggcgctgtacgcgtacatggcgccgcacgtgtccaagaacccgcgcgccgcgtatgtcaactacgtggacctcgacctcggcaccaatgctctcgccgggaacgtgtcctcgccgtcgtcgtcggtgagccgagcacggtcgacgtggggctcggcgtacttctcgccggcgaacttcgaacggctcgtcggggccaagacgctcatcgatcgttccaacgtcttcagcaatgcgcagagcattccaccgttacaaatataa</cdnaseq>

Protein Sequence

<aaseq>MRNTTILLLALLLTLLSSSSTWPPPLTGVAAAGSLPSCLLATGV RNFSLAGSPAYDALLNFSIQNLRFALPAAGAVPRPAAVVLPRGRSELTSAVLCARHAS LRIRVRSGAHSYEGLSYTVGDGGDDADRVRFVVIDLTRMNRVRVDAASATAWVESGAT LGEIYYAVASSSSSLAFPAGSCSTVGAGGHISGGGFGLLSRKFKLAADNVLDAILVDA DGRVLDRSSMGENVFWAIRGGGGGGWGVVYAWKLRLVQVPNTLTAFTPKRTGSVDAIA GLVHRWQYVGSALPDEFYLSVFLTIGGASSSSPSRDGNVTVSFTGLVLGSKELAMSVL SERFPELGLAEPEMSEMSWVESAARFAGLSSTEELTSRASRTKHYAKSKSDYVRSPIA RGAVAAILRYLAGEPAGYVILDPYGGAMAREGSGDTPFPHRAGNLYSVQYGVTWEAGD DGGGGGGGGEARMAWLRALYAYMAPHVSKNPRAAYVNYVDLDLGTNALAGNVSSPSSS VSRARSTWGSAYFSPANFERLVGAKTLIDRSNVFSNAQSIPPLQI</aaseq>

Gene Sequence

<dnaseqindica>115..1690#1..86#atgcgcaacaccaccattctgcttcttgccctcctcctcaccttgctctcctcgtcctcgacatggccgccaccgttgacaggcgtgtgccgccggccagcattgcgacgacagagcagcggcgggctcgctgccgtcgtgcctcctcgccaccggcgtccgcaacttctccctcgccgggtcgccggcctacgacgcgctgctcaacttctccatccagaacctccggttcgcgctcccggccgccggcgcggtgcccaggccggcggccgtcgtgctcccgcgcggccggagcgagctcacgagcgcggtgctgtgcgcgcgccacgcctcgctgcgcatccgcgtgcgcagcggcgcgcacagctacgagggcctctcgtacaccgtcggcgacggcggcgacgacgccgaccgcgtccgcttcgtggtgatcgacctcacgaggatgaacagggtgcgtgtcgacgccgcgtcggccaccgcgtgggttgagtccggcgcgacgctcggcgagatctactacgccgtcgcgtcgtcgtcgtcctcccttgcgttcccggctgggtcgtgctcgaccgtcggagcaggcgggcatatctccggcggcgggttcgggctgctgtcgcgcaaattcaagctcgccgccgacaacgtgctggacgcgatcctcgtcgacgcggacggcagggtcctggaccggagctccatgggcgagaacgtgttctgggcgatccgcggcggcggcggcggcggctggggcgtggtctacgcctggaagctccggctcgtccaggttccgaacaccttgacggcgttcacgccgaaaaggaccggttcggtggacgccatcgccgggctagtgcatcggtggcagtacgtcggctcagctctgcccgacgagttttacctctccgtcttcctcaccatcggcggcgccagctcgtcgtcgccatcacgagatggaaacgtgacggtgtccttcacagggctggttcttggttccaaggagctggccatgtcggtgctgagcgagaggttcccggagctgggcctcgccgagccggagatgtcggagatgagctgggtggagtcggcggcgaggttcgccgggctgagctcgacggaggagctgaccagccgcgcctccaggacgaagcactacgccaagagcaagtcggactacgtgcggtcgcccatcgcgaggggcgccgtggcggcgatcctccggtacctcgccggcgagccggcggggtacgtgatcctcgacccctacggcggcgccatggcgcgtgaggggagcggcgacacgccgttcccgcaccgcgccggcaacctgtacagcgtccagtacggcgtgacgtgggaggccggcgacgacggcggcggcggcggcggcggcggcgaggcgcgcatggcgtggctgcgggcgctgtacgcgtacatggcgccgcacgtgtccaagaacccgcgcgccgcgtatgtcaactacgtggacctcgacctcggcaccaatgctctcgccgggaacgtgtcctcgccgtcgtcgtcggtgagccgagcacggtcgacgtggggctcggcgtacttctcgccggcgaacttcgaacggctcgtcggggccaagacgctcatcgatcgttccaacgtcttcagcaatgcgcagagcattccaccgttacaaatataa</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0343600, RefSeq:Os08g0343600