Os09g0424300

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Revision as of 07:26, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0424300| Description = S-adenosylmethionine decarboxylase| Version = NM_001069752.1 GI:115479246 GeneID:4347103| Length = 3400 bp| Definit...")
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Gene Name

Os09g0424300

Description

S-adenosylmethionine decarboxylase

Version

NM_001069752.1 GI:115479246 GeneID:4347103

Length

3400 bp

Definition

Oryza sativa Japonica Group Os09g0424300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:16039407..16042806

Sequence Coding Region

16039732..16040910

Expression

GEO Profiles:Os09g0424300

Genome Context

<gbrowseImage1> name=NC_008402:16039407..16042806 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:16039407..16042806 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcgatgtccttggctgattcttggggctctgcccctgcctcgcccattgggtttgaaggctatgagaagcgccttgagataacattgtctgatgcgcccgtctttgtggacccctgtggtcgcggccttcgtgccctctcacgtgagcagatcgactcgttcttggatcttgcaaagtgtaccattgtatcccatctttcgaacaagcacttcgactcatatgtgctttcagagtcgagcctttttgtttatccccacaaggttgttctgaagacctgtggtacaacaaagcttctgctctccattcctcgcatccttgagcttgctgcagagttgtcactgcctgttctatcagtgaagtactctcgtgggatgttcatcttccctggagcgcagccatcaccgcatcgcagcttcttggaggaggtttctgtgctcaacagcttctttggtggcctcaagtcaggtggcaatgcttatgtcattggtgatgcattcaagcccaagaagaagtggcatgtctactatgccacagaagagcctgagcagcccatggttacactcgagatgtgcatgactgggctggatgctaagaaagctgaggtgttcttcaaggattccactgatggctcctgctcatcagctaaggagatgactatgttctctgggatttctgaaatcatccctgagatggagatttgtgactttgagtttgacccgtgtgggtactcaatgaatggcatttatggtcccgccgtctccacgatccatgtcactcctgaggaaggtttcagctatgcaagctatgaagcaatgaacttcaatcctagctccttggtctacgatgatttgatcaagaaggtcctggcttgtttctgcccttcagacttttcggtcgctgttaccatcttcggtgggcatggttttgccaaatcatgggcaaaaggtgcagaggttgattcctacatgtgcgatgatcttgttgagcaagagcttcctggtggcggtgtgctgatgtatcagagttttactgctgttactcctggtgctgtgtcaccgaggtcgaccttggatggctggaacagcgatggagcagagatggttgcgaagagcaaagagatgagtgtctgctgggaaggagagaaggcggcgaagaagaaagatgcagatgcctga</cdnaseq>

Protein Sequence

<aaseq>MSMSLADSWGSAPASPIGFEGYEKRLEITLSDAPVFVDPCGRGL RALSREQIDSFLDLAKCTIVSHLSNKHFDSYVLSESSLFVYPHKVVLKTCGTTKLLLS IPRILELAAELSLPVLSVKYSRGMFIFPGAQPSPHRSFLEEVSVLNSFFGGLKSGGNA YVIGDAFKPKKKWHVYYATEEPEQPMVTLEMCMTGLDAKKAEVFFKDSTDGSCSSAKE MTMFSGISEIIPEMEICDFEFDPCGYSMNGIYGPAVSTIHVTPEEGFSYASYEAMNFN PSSLVYDDLIKKVLACFCPSDFSVAVTIFGGHGFAKSWAKGAEVDSYMCDDLVEQELP GGGVLMYQSFTAVTPGAVSPRSTLDGWNSDGAEMVAKSKEMSVCWEGEKAAKKKDADA </aaseq>

Gene Sequence

<dnaseqindica>1897..3075#acgcctcggcaatccaaagccctcctcgtcctcgcagagcatccattgcctcgattttctattccaaattcccccacgcgaagaacagccagcgccctcctcctcctcctccttcgccttcctcctggtttcttgccatctttccagggaaggaggaaccgcggcccggccgcattcttggacaagaattgttgggtgagtctcgagtccccccccctccttacttgtggttatgctcatgttgctgtgctattctgtagaagaagattgcatatttgcatgtactatgcgcttggattgtttagcgagtcgcggagatgtttcgtttcgtaacgcgttgggggtctggatcccgatttagcttcttggggatcgatttgggaggggatttaggacctgtcttcccctgttcctttcttgcatgcgttgggaattttgtttgttctttgtggcgaccgggctgttagttattagagaacgtattgcgagctgttcgggtgcctgggcgattctagaaagatgtctcttttgctaatggttattattagctgaatcgctgatatggtgaatccaggaaagtttcatgctttttgtcctatgtcctgtctttctttgtcatattcgtacctttcccagtttgcgatgcccaagaagcaacctttctgttggaaacatctagtgctcaattctttatttcaaattgttgaaatcttcaaggagcagtttattgtgcgcccttgttgattgctcttgtttctgccaggtttccttgttaggctctagttttgctcgttgtttactgtaaattcccatgtatattaagtttgtgcagtgcgctgtcagcttggcaaatgggcttttcatttcctgatcgaaaaaaaaaacaaacctgtgattaacaaggggaaattaccttcactgtgcctattggcatcattccaagttattcatgctttagttcctagccattaacttaagatagaaataagatcctgccagttcactagttttcttgtcagtttgatatatactttgatcttgtcttttctggttgttttccttaattttgtctgtgttgttctagtgcttaattagttgcctctcagttcttcacattctatgtttttgagtaaaactctgtccatatggccgttctgttatgtatctcagcaatctgcttatatttttttttttgcatccccacacaattctatttgacgttgtaaaaaagaagagagataactagataagcgcaactgatgctctatacttagtttcacggttcttggtttaatgcctaaaaattgtgcactatcagtacttcaattatgttatctagtagtgttttgtctcctctgaataatgcctgccattcttatgctgctctactgctgagaaaactacactatttgaattactgattgctaattatgtttcgattaacagcataaaggaacattttgttgatgttctaatggagtcaaaaggtggcaaaaagaagtctagcagtagtagttccatgtacgaagctcccctaggctacaagattgaggacgttcgcccagccggaggaatcaagaagttccagtctgctgcttactccaacgtaagcaccaaaagatttaagcagcatactttaaataacaaaaatatttacatttatgaactctggtttctaatgcttatttggtttatcttttcctttgcagtgcgctcgcaagccatcctgatattccttcacatgcctttccccgtagagtaggaatttcctgcaatttttcctttgttttgttgcaataaatctcccttggctggctgctttctcaatctcttcccttgtcttctccgatctcttctttcctgtcttgtccactgctccttgcaacacttgatcaaatgtcgatgtccttggctgattcttggggctctgcccctgcctcgcccattgggtttgaaggctatgagaagcgccttgagataacattgtctgatgcgcccgtctttgtggacccctgtggtcgcggccttcgtgccctctcacgtgagcagatcgactcgttcttggatcttgcaaagtgtaccattgtatcccatctttcgaacaagcacttcgactcatatgtgctttcagagtcgagcctttttgtttatccccacaaggttgttctgaagacctgtggtacaacaaagcttctgctctccattcctcgcatccttgagcttgctgcagagttgtcactgcctgttctatcagtgaagtactctcgtgggatgttcatcttccctggagcgcagccatcaccgcatcgcagcttcttggaggaggtttctgtgctcaacagcttctttggtggcctcaagtcaggtggcaatgcttatgtcattggtgatgcattcaagcccaagaagaagtggcatgtctactatgccacagaagagcctgagcagcccatggttacactcgagatgtgcatgactgggctggatgctaagaaagctgaggtgttcttcaaggattccactgatggctcctgctcatcagctaaggagatgactatgttctctgggatttctgaaatcatccctgagatggagatttgtgactttgagtttgacccgtgtgggtactcaatgaatggcatttatggtcccgccgtctccacgatccatgtcactcctgaggaaggtttcagctatgcaagctatgaagcaatgaacttcaatcctagctccttggtctacgatgatttgatcaagaaggtcctggcttgtttctgcccttcagacttttcggtcgctgttaccatcttcggtgggcatggttttgccaaatcatgggcaaaaggtgcagaggttgattcctacatgtgcgatgatcttgttgagcaagagcttcctggtggcggtgtgctgatgtatcagagttttactgctgttactcctggtgctgtgtcaccgaggtcgaccttggatggctggaacagcgatggagcagagatggttgcgaagagcaaagagatgagtgtctgctgggaaggagagaaggcggcgaagaagaaagatgcagatgcctgagaaatcggcagttcttcaacctcaagttgcaagtttgattcatctgaagtttctgagacgccttatttggttctgctcttgcagtttcggttaagcagctggctgggctaccggcaaagcatatgttacttgttcattgttcttttatatctgtctgcccaaataagtgctctagatggtttgctgcgtctgccatagtgagcaattcagattgtagtagaattcttatctgttgccgatgctctttaagggagaatgatatgtaactcgattattttcaataactattgcaacttccataattttctgtccattggttatgttt</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0424300, RefSeq:Os09g0424300