Os08g0356500

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Revision as of 12:57, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0356500| Description = Protein of unknown function DUF247, plant family protein| Version = NM_001068156.1 GI:115476049 GeneID:4345359| Leng...")
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Gene Name

Os08g0356500

Description

Protein of unknown function DUF247, plant family protein

Version

NM_001068156.1 GI:115476049 GeneID:4345359

Length

2483 bp

Definition

Oryza sativa Japonica Group Os08g0356500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:16395682..16398164

Sequence Coding Region

16396380..16397839,16397949..16397997

Expression

GEO Profiles:Os08g0356500

Genome Context

<gbrowseImage1> name=NC_008401:16395682..16398164 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:16395682..16398164 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggggggcgatcctactcgttgcgttgcagagttggagatgaaaacagatagctgtgtgattgacatcccttcattggcgaaagaactgagggtcgaactctccagcttcaagtcgtcgacggcgcgggtcgtcggcggcgccgcgcctccgccgtgcatcatcgtcgacaaggttggtgagtccacccgcatccacgacccgcacgagtacgtgccgcagtacgtctccatcgggccgtaccaccgcgccgccgacctcgccggagaggccatcaaggtgaagtacctcggcgacgtcctctcggcggcggcggcgagctccaccgcgccgatgacgctcgaggactacctctccgagctggcgcacctcgagcacagcgtgaggaggtgctacgtccattcgttcgacatcccaagcagggagttcgtgcgcatgctgctgctcgacgcctgctacatcctcgtccgcttcggcgacgtgctcacgccgcgcaccgcggcgccgccgcagccggcggcggcggcggcggaggaggtggccgtggctaacggcgtcgtgcacgcggggcaccgcgtcgtgccgaccgaggagaggagagcggccgcagacgaccagcagatggccgtcgcggtggtccgcgacgtgctctaccttgccgagaaccagatcccgttcttcgtcgtcgacaaggtccaccagctgacgttcctcgacggcgaaactccggtgttggacgccatcgcgaggtacgcgcacgacctgttgagttggacggagtactcggtcgcgacgccgacgatagtggcgccgccggcgctgcggccggagccggcgaaccttctccacctgctgcacatgcacttcacgcctaccgtgctcgcttccggcaaggtcagtcgcggcggaaggtccgtgggccggtggcgcacggcgacggagtaccactacgccggcgtgacgttcaagcgccgcccgctcagcagcggcggcggcgcgcgcagcatcctcgacgtgaaggtgagccggcgcggcggcgcgctgcaggtgccccggctgagcatcgacggcgagacgtggcggctgctccggaacctgatggcgctggagcagagcaacccgtcggcggcggggagccacgtgacggcgtactgcgtgttcatgtcgcagctggcgtgcacggcgagggacgtggagctgctgtcgcggcgcggcgtgatcgtgcacggcctgggcaacgacggcgaggtcgcgggcctcttcgcgaacctgtgcaagggcgccgtgttcgacttcgacgaggccgaccagaactacctgaggccggtgtgccaggtgctcgaccggcggttccggagtaggccgcggcggtggatggcgtcgctgaggcagaagtactttctcaacccgtggctcaccgccggcctcgtggcggccaccattgggctcgtctgcaccgtgatccaggcagtttactccgttcttagttacgtaaaacccgggaactag</cdnaseq>

Protein Sequence

<aaseq>MGGDPTRCVAELEMKTDSCVIDIPSLAKELRVELSSFKSSTARV VGGAAPPPCIIVDKVGESTRIHDPHEYVPQYVSIGPYHRAADLAGEAIKVKYLGDVLS AAAASSTAPMTLEDYLSELAHLEHSVRRCYVHSFDIPSREFVRMLLLDACYILVRFGD VLTPRTAAPPQPAAAAAEEVAVANGVVHAGHRVVPTEERRAAADDQQMAVAVVRDVLY LAENQIPFFVVDKVHQLTFLDGETPVLDAIARYAHDLLSWTEYSVATPTIVAPPALRP EPANLLHLLHMHFTPTVLASGKVSRGGRSVGRWRTATEYHYAGVTFKRRPLSSGGGAR SILDVKVSRRGGALQVPRLSIDGETWRLLRNLMALEQSNPSAAGSHVTAYCVFMSQLA CTARDVELLSRRGVIVHGLGNDGEVAGLFANLCKGAVFDFDEADQNYLRPVCQVLDRR FRSRPRRWMASLRQKYFLNPWLTAGLVAATIGLVCTVIQAVYSVLSYVKPGN</aaseq>

Gene Sequence

<dnaseqindica>326..1785#168..216#gtaagcgtggattaatctaatctcctcgtcgatgtgatcttacggccaattggataaaaacgcctctggagaattttatgctcgcttggccactaatggagttgttagtgacagggcagctgctcctctgcttcctgctggactgagccgcagaggaggaagaaacgatggggggcgatcctactcgttgcgttgcagagttggagatgaaaacaggtgccaacaagatcctttcttagatcagctcagaaatttgaaattgagcataatttgatggtttatttgtgctaattgagtaggacttttttgtgctaatcgattgcagatagctgtgtgattgacatcccttcattggcgaaagaactgagggtcgaactctccagcttcaagtcgtcgacggcgcgggtcgtcggcggcgccgcgcctccgccgtgcatcatcgtcgacaaggttggtgagtccacccgcatccacgacccgcacgagtacgtgccgcagtacgtctccatcgggccgtaccaccgcgccgccgacctcgccggagaggccatcaaggtgaagtacctcggcgacgtcctctcggcggcggcggcgagctccaccgcgccgatgacgctcgaggactacctctccgagctggcgcacctcgagcacagcgtgaggaggtgctacgtccattcgttcgacatcccaagcagggagttcgtgcgcatgctgctgctcgacgcctgctacatcctcgtccgcttcggcgacgtgctcacgccgcgcaccgcggcgccgccgcagccggcggcggcggcggcggaggaggtggccgtggctaacggcgtcgtgcacgcggggcaccgcgtcgtgccgaccgaggagaggagagcggccgcagacgaccagcagatggccgtcgcggtggtccgcgacgtgctctaccttgccgagaaccagatcccgttcttcgtcgtcgacaaggtccaccagctgacgttcctcgacggcgaaactccggtgttggacgccatcgcgaggtacgcgcacgacctgttgagttggacggagtactcggtcgcgacgccgacgatagtggcgccgccggcgctgcggccggagccggcgaaccttctccacctgctgcacatgcacttcacgcctaccgtgctcgcttccggcaaggtcagtcgcggcggaaggtccgtgggccggtggcgcacggcgacggagtaccactacgccggcgtgacgttcaagcgccgcccgctcagcagcggcggcggcgcgcgcagcatcctcgacgtgaaggtgagccggcgcggcggcgcgctgcaggtgccccggctgagcatcgacggcgagacgtggcggctgctccggaacctgatggcgctggagcagagcaacccgtcggcggcggggagccacgtgacggcgtactgcgtgttcatgtcgcagctggcgtgcacggcgagggacgtggagctgctgtcgcggcgcggcgtgatcgtgcacggcctgggcaacgacggcgaggtcgcgggcctcttcgcgaacctgtgcaagggcgccgtgttcgacttcgacgaggccgaccagaactacctgaggccggtgtgccaggtgctcgaccggcggttccggagtaggccgcggcggtggatggcgtcgctgaggcagaagtactttctcaacccgtggctcaccgccggcctcgtggcggccaccattgggctcgtctgcaccgtgatccaggcagtttactccgttcttagttacgtaaaacccgggaactagaaatcgggaaactattctaaactctcaataggcagtgcacgactcaatgtccagcacttggctcgccgtggcatggcaagaggtggaaacgccaagtcgtcggtgtcggatgataccgtaccgatgatcggatttcgtccagggttctgcaaaattcctcaatccgccagtgtcatcggtgatgttggaagaatgtccggaggtgcagcatatatcgaaaaatatggatatggaagcatctgatgggagaaattgattctgaagattaactgtggtggatcatattagaagagagcagtggtcactggtcagcgataaaaattgagctttcctgggtgcagccgccaaggtgattttcttggggatgttttgggcctgctgctgaaatgctgacaggctgatgatctgaaatggttcggaacgtgggcatgctcatgtcatgtgtgacaatatccatgaagtcagagcttgtgttgggtgaattgtgaggtggctttattatcctccaaattgtgctagtcgaagatacttctgtttctatataaaccagttttggatggatcgggtcttctagtttatgcttcattttctatttataaaagagacaggcagtcatggtcggtgtactacatatgaatgttgaatagtacatttttctccgtgtctaatattgtaaaatatttaataaagccagttgt</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0356500, RefSeq:Os08g0356500