Os08g0359000

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Revision as of 12:57, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0359000| Description = Conserved hypothetical protein| Version = NM_001068162.1 GI:115476061 GeneID:4345365| Length = 4143 bp| Definition ...")
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Gene Name

Os08g0359000

Description

Conserved hypothetical protein

Version

NM_001068162.1 GI:115476061 GeneID:4345365

Length

4143 bp

Definition

Oryza sativa Japonica Group Os08g0359000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:16594144..16598286

Sequence Coding Region

16594308..16594568,16594693..16594739,16594830..16594930,16595267..16595355,16595648..16595731
,16595896..16595949,16597323..16597403,16597804..16597849,16597943..16597995

Expression

GEO Profiles:Os08g0359000

Genome Context

<gbrowseImage1> name=NC_008401:16594144..16598286 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:16594144..16598286 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtctgtgcagtgcgcggtccggccgctcgcggcgctcccggcggcggcgggcacgtcgcgctcgcgccgcgttggcggggcgagccatgtcgctgttgctgccgtgccgtcttcgccccgccggccgaggcgcgctgcctccgtcgcgccggtcagggcggccgagtcgtccccgccggccgcggcgcccgcgccgccgtcgtccggggccgcggccgggaaggccgtcgtccccgacgaggagttcaccctcgccaaggtttcgttcggtgtgattgggctaggtgtcggtggcaccctcttgtcgtatggattcggggcgtatttcaacctgcttcctggttcggagtggtctgcacttatgctaacatatggttttccactcaccatcatcggcatggcattgaagtatgctgaactgaaaccggtgccttgcacaacctacgccgatgcttttgctctaagagaaaagtgtgctacccctatcctcaatcaggtcaggagtgatgttacacgttacagatacggtgatgagcagcacctggatgaagcactgaagaggatctttcaatatggtttgggtggtggaattccaaggcgtagtgcacctattttacaaaacattcgggaagaagtaactgatgatgggaagtacagtttagtacttgtatttgaagccaaagcattggagatatccgattttgagaagagacaggccaaattcacatccttttttggtcctgggattaaggcagaaattggaaaaggtggtgatgatctatatgaagttcgtcttatctcagaaactacttag</cdnaseq>

Protein Sequence

<aaseq>MSVQCAVRPLAALPAAAGTSRSRRVGGASHVAVAAVPSSPRRPR RAASVAPVRAAESSPPAAAPAPPSSGAAAGKAVVPDEEFTLAKVSFGVIGLGVGGTLL SYGFGAYFNLLPGSEWSALMLTYGFPLTIIGMALKYAELKPVPCTTYADAFALREKCA TPILNQVRSDVTRYRYGDEQHLDEALKRIFQYGLGGGIPRRSAPILQNIREEVTDDGK YSLVLVFEAKALEISDFEKRQAKFTSFFGPGIKAEIGKGGDDLYEVRLISETT</aaseq>

Gene Sequence

<dnaseqindica>165..425#550..596#687..787#1124..1212#1505..1588#1753..1806#3180..3260#3661..3706#3800..3852#gggggtgatccagtcgcgcgctcctccttccacgcgccaaaaccccagccaccaccaccatctcccgtcccgttcccaccaaaatctccccctccgatttcgcgcggctgcggtggtggtgcgtgtgctgctgccactgacgttgcggcgggagagcgcgatcgatgtctgtgcagtgcgcggtccggccgctcgcggcgctcccggcggcggcgggcacgtcgcgctcgcgccgcgttggcggggcgagccatgtcgctgttgctgccgtgccgtcttcgccccgccggccgaggcgcgctgcctccgtcgcgccggtcagggcggccgagtcgtccccgccggccgcggcgcccgcgccgccgtcgtccggggccgcggccgggaaggccgtcgtccccgacgaggagttcaccctcgccaaggtgagccaccgggggcgcgttctttaattcttgcggtagcagcagcagcagcagcgacagcaggtgttgaattgtagcggcggcgacgagtttctgacggcgaatggaatctcacttcatgcaggtttcgttcggtgtgattgggctaggtgtcggtggcaccctcttgtcgtaagttgggattgcacaattgtgcttggcattattcagaatgatgaagtagcttgaaaggcttgatttggtgcgttcttgtgatttcaggtatggattcggggcgtatttcaacctgcttcctggttcggagtggtctgcacttatgctaacatatggttttccactcaccatcatcggcatggcattgaaggcaagaactatcccccatgtgacatgtacaagaggagaggcaatgaggcatatgacatgttgagacatatcaattgtatttgtttagattgtttgaccatactggtcaacttaagaccttcctcaggaaggtgccttttggcaattagcagtcattggcctttcattgagtttgcaccttcatattacatacttgaaaataactctgcagcaatagaatgcagtttactgtgttggagtttcagatgagcagctgtccttagtttggagtttaggttgaaggttgtcagcttctttgttgcagtgtgcactgattcttaaatttttctacatgcagtatgctgaactgaaaccggtgccttgcacaacctacgccgatgcttttgctctaagagaaaagtgtgctacccctatcctcaatcaggtactattcaatttccattatctaggacatatgctccacttccactgctcaaatttaactatttattcatggtgtacttgagctgtttataatctgttttcttcttatttggagaaaaataaggctacatgatgagtacaatcctcttagtggatttcttaccattggtgccaggggggatttaagtgttgaaaattgtaggaagaggcgtgagtagacattagcgaatttgtggattttggaaagataacaccggcaatagtattgatcttccagctttacttacctctaggtcaggagtgatgttacacgttacagatacggtgatgagcagcacctggatgaagcactgaagaggatctttcaatatggtttggtaattcctttttttgcccttttttactaactggacattgttttggctcatctattttttatcaataattccatgttctgttattagaagttttgcaaggcaagaacttccttgctttatcctacttattgatctgccttccttttgcacaatccaactgacagggtggtggaattccaaggcgtagtgcacctattttacaaaacattcgggaagaagtaagttcccaatacatttatttttttctgtgaagtagtctttccaaaatattgcataatgtaaatcacacatatcattttcatagtttatatttcatactcgttggaagagtttaattacaaaatggacccctcaagtttcacaaaaggttactttggtccatcaagtttaaaagaagccactttagaccctgcttgggtgagcttcagatttatctgaagctgatatcaaacaaacccaactaatcctgtaaggatgatttacttaacatgccatccaagaccggtccaaattgttcacacaatatctgccgcatgtgaattggcatttggcacctgttacttcaatgtggactgtaggatgttactgaaacaattcctacagtaacatcaagcaaagttgatgattcaaaatatttgcctgtaaaagaatataaatgggcaaagtagcgatttttaatggcctagacccttttactctaaccagactactaaaaggattagtgcagtgattagcatgtcaaatgtcaacttgttacataatggccaatttgtggtgttcttgaactatagatacatgaaaaggaggcaggaaatttaaatatgaatatcataaatatgtatttttcttgtgggaaataattcctcattgatgtttctgtgtccaccatgcatctaaaaatcctgcatccctccatttctaatggaagttttgtcccaatcgattgtatcatcattaaagtcatgacagatgaactcaaatgatattaagtcaaattaatagcagatttttcagctagcatcaaatgctatttctagatctccgtagttttccttggtcattgtttcctttgtttaatggcttcaattagtacactgttagcactgatctcagggcaaaggcacagccaatgttggtaagagtggtgccaaagatcctttggcttgattttatttttattgaaattattgtcaacttttgttcattggacaaggtagtactaggccttagagggctcggccccttcttttctcttcgagacaagccttaggccctgtagttgattctactttacccagttaatgaacatggcccagttatatgttaatgtttcctagttgttcttcatctgatattcctcaagtgtaaatgatatagcttttggctgaactcatgatgaaggaattgcacaaaaataattcagacaatctttgaaactgtccaaatgccttgtggagattccaatgggttatatttgtttattgatatctccagttttaccccaaaaaacatcttcgtgggttacagaaagaatgtcttgttcactgggtgcgattcttggttaaaggactcagtagttttccccttgtaggtaactgatgatgggaagtacagtttagtacttgtatttgaagccaaagcattggagatatccgattttgagaagagacaggtgaatcccctctcctaatttctaaatataatacagcacggcttccattgtggactgagatgcatgtggtatgcctttgtggtcagatctagatacatgtactagtcttaagctctatactaaactaatctcatgttacaaatacatgaatttttagcagctttgggttgtggaaaagatgaggttcaaaaattagcagtagaagaaagtgtaacccaaaacttgatgctcaaaaatgacaaaattctgtgcctagatagctcccataaactatttctttgatgtactgtgtacttgggcgagctgttcgagaacaatacatactgtcgtcatgcttatgatccaaaatagaattaaatattaacattactgattccttgcaaacatttttcccacgcaggccaaattcacatccttttttggtcctgggattaaggcagaaattggtgagttgtattattttttctttagctccattagattttgaagcttggtttgtctatatcatccattgtcaatttatgtttctgatgatacaggaaaaggtggtgatgatctatatgaagttcgtcttatctcagaaactacttaggaaacacacaggactcgcagtttccttttctgctaatataccagaaaaatgtttttttcccttgttccactaatttgtgtatatgatgttagtattctcagagttctgccattatatgcatcatggctgcttttctgtctactggttatagtctgtgtgacggagaaatagcatttttcatgtgcttttgtgcacatgcacaaatgaaaatgtggctgtaatatgcatgtaaattgactggattcacagagttctccatacgtagtaaaatagtagctgacattattttgg</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0359000, RefSeq:Os08g0359000