Os08g0366000

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Revision as of 12:58, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0366000| Description = Phosphoenolpyruvate carboxylase| Version = NM_001068181.1 GI:115476099 GeneID:4345387| Length = 5853 bp| Definition...")
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Gene Name

Os08g0366000

Description

Phosphoenolpyruvate carboxylase

Version

NM_001068181.1 GI:115476099 GeneID:4345387

Length

5853 bp

Definition

Oryza sativa Japonica Group Os08g0366000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:17052716..17058568

Sequence Coding Region

17053040..17053336,17053462..17053848,17053984..17054982,17055087..17055241,17055329..17055416
,17055488..17055591,17055671..17055893,17056086..17056170,17056253..17056644
,17058088..17058252

Expression

GEO Profiles:Os08g0366000

Genome Context

<gbrowseImage1> name=NC_008401:17052716..17058568 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:17052716..17058568 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggggaaggtggagaagatggcgtcgatcgacgcgcagctgcggatgctggcgccggcgaagctgtcggaggacgacaagctggtggagtacgacgccctcctcctcgaccgcttcctcgacatcctccaggacctccacggcgacgacctccgcgagctggtccaagaatgctatgagatcgctgctgagtatgaagggaagcatgactcccaaaagctcgatgaacttggcaacatgttgacaagcttggatcctggtgactccattgtgatggccaaagctttctcccacatgcttaatttggctaacttggccgaggaggtccagattgcatacaggaggagaatcaagctcaagaagggtgactttgctgatgagaactcggcactgacagaatctgacattgaagaaacttttaagaggcttgttgttgacctgaagaaatcaccagcagaggtctttgatgcccttaagagtcagactgttgacctggttttgactgcacatccaacacagtcagtgaggaggtcactgcttcaaaaacactcaaggataaggaattgtttggttcaactatactcaaaggatatcacaccagatgataaacaggagcttgatgaggctctccagagggagattcaagcagcctttagaactgatgagatccgaagaacccagccaactcctcaagatgaaatgagggctggtatgagttactttcatgagacaatctggaaaggtgttccgaagttcttacgccgtctggacactgccttgaagaacatcggaattgatgagcgtgttccttataatgcacctctcattcagttctcttcttggatgggaggagaccgtgatggaaatccaagagtgacaccagaagtcacaagggatgtatgcttgcttgctagaatgatggcttcaaatttatactgctcgcaaattgaggatctcatgtttgagctgtctatgtggcgatgcaatgatgagcttcgggcacgagcagatgagctgcatctctcctcaaagaaagatgcaaagcactatatagaattctggaagaaggttccgcccagtgagccataccgagttgttctaggtgatgtgagagacaagctgtacaacacacgtgaacgagcacgccagttattatccagcggatattctgacattcctgaagaaaccactctcaccagtgttgaacagttcttagagcctctggagctatgttacaggtcactctgcgattgcggtgaccgtgtaattgctgatgggacccttctggacttcttgcgccaggtgtctacctttgggctgtgccttgtgaggcttgacattaggcaagaatctgacaggcacaccgatgtcctcgatgccatcaccacatacctgggaataggatcataccgtgagtggtccgaggaacgccgtcaggactggctcttgtctgaactcaatgggaagcgcccattgtttggcccagaccttcccaagaccgatgagattgctgacgttctagacacgttccgcgtgatagctgagcttcccgctgacaattttggggcctatatcatttccatggcgacagctccgtcagacgtgcttgctgttgagctcctccaacgtgaatgccatgtgaagacaccacttagagttgtcccactgtttgagaagttggctgatcttgaatctgccccagcagcagtggccagactgttctccatagattggtacagagaaaggataaatggcaaacaggaggtcatgattggctattcggactcgggtaaggacgccggtcgtctctcggcagcttggcagctgtacaagtctcaggaggagctcatcaacgttgccaaggagtttggggtgaagttgacaatgttccatgggcgcggtgggactgtcggaagaggcggaggtcccactcatcttgccatcttgtctcagccaccagacacaatccatggatctctccgggtcactgtccagggtgaagtcattgagcagtcctttggtgaggagcacctttgcttcaggacactgcagcgtttcacggctgccactctggagcatggcatgcatccaccaattgcgccgaaaccagaatggcgtgctctgcttgatgagatggctgtggtggctacaaaggaataccggtccatcgtcttccaggaaccacgctttgtcgagtatttccgccttgcaacaccagagatggagtatggaaggatgaatataggaagcaggccatccaagagaaagccgagtggtggcatcgagtcactccgtgccatcccatggatcttcgcgtggacgcaaactcgcttccaccttcctgtctggcttggcttcggttctgccttcaagcacatcctggagaaggacatcaggaacctccacatgctccaggagatgtacaatgagtggccgttcttcagagtcacgatcgatctggttgagatggttttcgccaagggtgaccctggcatcgccgcattgtacgacaagctccttgtctccgaggagctatggcctctgggagagaaactgagggccaactgtgaagaaaccaaacagcttctccttcaggttgctggacacaaggatcttctcgaaggtgatctctacctgaagcagcgccttcgcctccgcaatgcctacatcaccaccctgaatgtctgccaggcttacacgatgaagcgaatccgcgacccggactaccatgtcacgctgcgcccccacatgtccaaggagatcatggactggtctaagccggctgcggagctggtgaagctgaacccgaccagtgagtatgcgccggggctggaggacaccctcatcctgaccatgaagggaattgctgctggaatgcagaacaccggctaa</cdnaseq>

Protein Sequence

<aaseq>MAGKVEKMASIDAQLRMLAPAKLSEDDKLVEYDALLLDRFLDIL QDLHGDDLRELVQECYEIAAEYEGKHDSQKLDELGNMLTSLDPGDSIVMAKAFSHMLN LANLAEEVQIAYRRRIKLKKGDFADENSALTESDIEETFKRLVVDLKKSPAEVFDALK SQTVDLVLTAHPTQSVRRSLLQKHSRIRNCLVQLYSKDITPDDKQELDEALQREIQAA FRTDEIRRTQPTPQDEMRAGMSYFHETIWKGVPKFLRRLDTALKNIGIDERVPYNAPL IQFSSWMGGDRDGNPRVTPEVTRDVCLLARMMASNLYCSQIEDLMFELSMWRCNDELR ARADELHLSSKKDAKHYIEFWKKVPPSEPYRVVLGDVRDKLYNTRERARQLLSSGYSD IPEETTLTSVEQFLEPLELCYRSLCDCGDRVIADGTLLDFLRQVSTFGLCLVRLDIRQ ESDRHTDVLDAITTYLGIGSYREWSEERRQDWLLSELNGKRPLFGPDLPKTDEIADVL DTFRVIAELPADNFGAYIISMATAPSDVLAVELLQRECHVKTPLRVVPLFEKLADLES APAAVARLFSIDWYRERINGKQEVMIGYSDSGKDAGRLSAAWQLYKSQEELINVAKEF GVKLTMFHGRGGTVGRGGGPTHLAILSQPPDTIHGSLRVTVQGEVIEQSFGEEHLCFR TLQRFTAATLEHGMHPPIAPKPEWRALLDEMAVVATKEYRSIVFQEPRFVEYFRLATP EMEYGRMNIGSRPSKRKPSGGIESLRAIPWIFAWTQTRFHLPVWLGFGSAFKHILEKD IRNLHMLQEMYNEWPFFRVTIDLVEMVFAKGDPGIAALYDKLLVSEELWPLGEKLRAN CEETKQLLLQVAGHKDLLEGDLYLKQRLRLRNAYITTLNVCQAYTMKRIRDPDYHVTL RPHMSKEIMDWSKPAAELVKLNPTSEYAPGLEDTLILTMKGIAAGMQNTG</aaseq>

Gene Sequence

<dnaseqindica>5233..5529#4721..5107#3587..4585#3328..3482#3153..3240#2978..3081#2676..2898#2399..2483#1925..2316#317..481#aggtggaagagacggacagaggccactacccgtgcaccacgccccctctcccacaatctcgcaaaaaagttgattttctttttcagcttcctcctcccctcctccgcttctcatcaatccactagcatatcagatcagattcctgtacacttccctttcctcgcatccaatcccgactatcaaatcatcaccatccttttgcaaaaccaaaaaaaaaaaagtagataaaagaagaaggttcttgcatccaagagaggaggacactgtccgtcgtgcagcgtttcttgcttggttgaatcgggtggttttgggggggatggcggggaaggtggagaagatggcgtcgatcgacgcgcagctgcggatgctggcgccggcgaagctgtcggaggacgacaagctggtggagtacgacgccctcctcctcgaccgcttcctcgacatcctccaggacctccacggcgacgacctccgcgagctggtatgctggtgctactctctctattcgatccccaatgactgattaaatctttttcatcatctgctactcctactctgctacctgcatgttcatgctccagatcagcagataatgcttgcttgtttgcttgctgcctgcgtgtgcgcgcttgtgaatatcttctttttttttaatggagtgatttggttgcttgtggactgattgactgactcactcactgaatgattggattagcttttgtgagtgggattgtggggattctgtgcttcagcataattggaacatggagagtgcccatgtttttgggggtgctttctgctttttctttattttaatttgggggtaaaaaaccaaaatattccaacagtttcttcctttattttttagtttgtcggttgacaagttggtgcttccagtgagggtactgagtggagttttcgttctggggcctgcccctttcttcttcttcttttttagagtattcggattatgtttctgggttaaaatatgtgtttgaattattgtgttcgtataatggaaattcagaaaaaaaactggcatcttttgcatttggagctgttttccaggggtgtatgtactgaaatctgaatatttactgtttgagtcaaatctgagctgaactttaattatctatcctgaattcctgattgattaacaactgccactttgtataaacaacagtttcatagacatccatcgtaactgaacacttcatttttatcaaattttaagcagaggaagtcaaagacatgggtgtcaaatgtttgtgttttttatttttgttgtttcgtcaaactgaatgtgacatgtactcattagttggatctttaggatatcaggaaatgacaactgtatattaaaagttttatattgacaaaccaacatgaattctttggtattgctagagccttgcttaagtacttactcctgtgcaaaaattttgaggtttagtgccctagtgtgctcaggtttggtgcttttgtatttgaagtcttcatttgcagacgtggctgcaattttttatagaagggtaaattgtgaatgaaatctgagttgatctttaattgtatattctgtatatctatcaaccactttaatgattacaacaaaaattccagctttacatgaacatgccatgaacttccgttgaaagtgaataacttggctttgtcagttccccgtgtggccaatgttcatgcacgagactaatattgaatacaatttgttttgtcaaaataaactgatacctttgttgcagacccttccatggatgtatgacaaggaattttttttttactttgatgtatagtcaattagtttgatttttttttgttctgaattgattggaaaataatgcctgtatttacaattttatatcaacggaaaaaccatggattgctaatttgttattgatatgtgtaggtccaagaatgctatgagatcgctgctgagtatgaagggaagcatgactcccaaaagctcgatgaacttggcaacatgttgacaagcttggatcctggtgactccattgtgatggccaaagctttctcccacatgcttaatttggctaacttggccgaggaggtccagattgcatacaggaggagaatcaagctcaagaagggtgactttgctgatgagaactcggcactgacagaatctgacattgaagaaacttttaagaggcttgttgttgacctgaagaaatcaccagcagaggtctttgatgcccttaagagtcagactgttgacctggttttgactgcacatccaacacagtcagtgaggaggtcactgcttcaaaaacactcaaggtgagttacagaaacaatactatgatatcaaacatcctatggtttcttatcatctaattgtgaaatttcaaatataatttaggataaggaattgtttggttcaactatactcaaaggatatcacaccagatgataaacaggagcttgatgaggctctccagagggaggtaagataatcaagttaatcactgactcatttatagtcttgattttttttttcaaattgtatgtgccttttcgattatttatagaaattataaattactttcagcatgatgctcaacatgccagattttgtgctccaactaaatttattaatgcattaataaggtgaatcagaacatgttcttatttttcagattcaagcagcctttagaactgatgagatccgaagaacccagccaactcctcaagatgaaatgagggctggtatgagttactttcatgagacaatctggaaaggtgttccgaagttcttacgccgtctggacactgccttgaagaacatcggaattgatgagcgtgttccttataatgcacctctcattcagttctcttcttggatgggaggagaccgtgatggtatgcaaaggatggcttttgacttctgtatagttcagttcttgtgcatttaataattttgtgcattgcaccaatttaggaaatccaagagtgacaccagaagtcacaagggatgtatgcttgcttgctagaatgatggcttcaaatttatactgctcgcaaattgaggatctcatgtttgaggtaagaattacttcatcccttatcttccacacatataaatcaattttattaaattctccaaattctggcagctgtctatgtggcgatgcaatgatgagcttcgggcacgagcagatgagctgcatctctcctcaaagaaagatgcaaagcactatataggtaaatatcgactacccattttaatagtgatggctatctgttatgattgacaatgttggcataatatcgtttccttgttcgtcttagaattctggaagaaggttccgcccagtgagccataccgagttgttctaggtgatgtgagagacaagctgtacaacacacgtgaacgagcacgccagttattatccagcggatattctgacattcctgaagaaaccactctcaccagtgttgaacaggtaaagtattgatcaaagaaccattggatgcttgtaactctgaaatgggcattctttcttcatcacctttgttcttaagtctaaacaactgtcttaccttgcagttcttagagcctctggagctatgttacaggtcactctgcgattgcggtgaccgtgtaattgctgatgggacccttctggacttcttgcgccaggtgtctacctttgggctgtgccttgtgaggcttgacattaggcaagaatctgacaggcacaccgatgtcctcgatgccatcaccacatacctgggaataggatcataccgtgagtggtccgaggaacgccgtcaggactggctcttgtctgaactcaatgggaagcgcccattgtttggcccagaccttcccaagaccgatgagattgctgacgttctagacacgttccgcgtgatagctgagcttcccgctgacaattttggggcctatatcatttccatggcgacagctccgtcagacgtgcttgctgttgagctcctccaacgtgaatgccatgtgaagacaccacttagagttgtcccactgtttgagaagttggctgatcttgaatctgccccagcagcagtggccagactgttctccatagattggtacagagaaaggataaatggcaaacaggaggtcatgattggctattcggactcgggtaaggacgccggtcgtctctcggcagcttggcagctgtacaagtctcaggaggagctcatcaacgttgccaaggagtttggggtgaagttgacaatgttccatgggcgcggtgggactgtcggaagaggcggaggtcccactcatcttgccatcttgtctcagccaccagacacaatccatggatctctccgggtcactgtccagggtgaagtcattgagcagtcctttggtgaggagcacctttgcttcaggacactgcagcgtttcacggctgccactctggagcatggcatgcatccaccaattgcgccgaaaccagaatggcgtgctctgcttgatgagatggctgtggtggctacaaaggaataccggtccatcgtcttccaggaaccacgctttgtcgagtatttccgccttgtgagtgttttgtttcttcataatcatcagacttggaacatttcatataatgcatttaaggcacttagctaaacattgttcatttcaggcaaaacctttgtaaattaattttctttacatttttcatgaaatcaggcaacaccagagatggagtatggaaggatgaatataggaagcaggccatccaagagaaagccgagtggtggcatcgagtcactccgtgccatcccatggatcttcgcgtggacgcaaactcgcttccaccttcctgtctggcttggcttcggttctgccttcaagcacatcctggagaaggacatcaggaacctccacatgctccaggagatgtacaatgagtggccgttcttcagagtcacgatcgatctggttgagatggttttcgccaagggtgaccctggcatcgccgcattgtacgacaagctccttgtctccgaggagctatggcctctgggagagaaactgagggccaactgtgaagaaaccaaacagcttctccttcaggtgcgtcgactgaccttgctagagctgattacactttggaaaccaatgatgcaacatctatgagatactgaaatgttccattgtcattcactcaatgaaattctttggccacttttgaccttcaggttgctggacacaaggatcttctcgaaggtgatctctacctgaagcagcgccttcgcctccgcaatgcctacatcaccaccctgaatgtctgccaggcttacacgatgaagcgaatccgcgacccggactaccatgtcacgctgcgcccccacatgtccaaggagatcatggactggtctaagccggctgcggagctggtgaagctgaacccgaccagtgagtatgcgccggggctggaggacaccctcatcctgaccatgaagggaattgctgctggaatgcagaacaccggctaagcgaactatcaactatgaagtgcctgaattcacaccgttttatatggactcttatcttgatttcggtcatttgctctcggccatttaattttgccgatgcagaggctcgtgcagtttctaatttctttcggaagatattttcaataatggagttgtacaagaacatcaattaatcaaaataaagtggatattatgttcattatcgtttagagcaacctggtaaagccatttttttgtgtagaccacatagtgagtgtgttgaaattccatttgcttaatgaaactgccattatctaagtaaagtcaaagggctcctttatattg</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0366000, RefSeq:Os08g0366000