Os08g0368000

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Revision as of 12:58, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0368000| Description = Similar to Coatomer delta subunit (Delta-coat protein) (Delta-COP)| Version = NM_001188611.1 GI:297726352 GeneID:9267...")
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Gene Name

Os08g0368000

Description

Similar to Coatomer delta subunit (Delta-coat protein) (Delta-COP)

Version

NM_001188611.1 GI:297726352 GeneID:9267932

Length

5914 bp

Definition

Oryza sativa Japonica Group Os08g0368000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:17209815..17215728

Sequence Coding Region

17213463..17213750,17214232..17214455,17214812..17214851,17214996..17214998

Expression

GEO Profiles:Os08g0368000

Genome Context

<gbrowseImage1> name=NC_008401:17209815..17215728 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:17209815..17215728 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggtggttcttgctgcttctatcatctcaaagtcaggaaaagcacttgtttctagacagtatgttgacatgactcgcataaggattgaaggattacttgcagcattccctaaacttgttggaaatggaaagcagcacacttacattgagactgaaaatgtccgttacgtttaccaacctattgaaggcttatatcttgtagttatcacaaacaaacaaagtaatattcttgaggatctcgacacgttgaggctactctccaagcttgtgcctgaatactgcccctctctcgatgacgatggtgtttgtaaaacagcttttgagcttatatttgcttttgacgaagccatttctcttggaaataaggaaaaagtaacagttcaacaggtcaaagaatattgtgagatggatagtgttgaagagatggagtacaagcagatgatgcaagagaaaatcaaggaaaccaaagattttatgaagaagaaagttattgagattgagaaaaccagggtgcaccctactctttttttgcagacaaatatgacttctatttag</cdnaseq>

Protein Sequence

<aaseq>MVVLAASIISKSGKALVSRQYVDMTRIRIEGLLAAFPKLVGNGK QHTYIETENVRYVYQPIEGLYLVVITNKQSNILEDLDTLRLLSKLVPEYCPSLDDDGV CKTAFELIFAFDEAISLGNKEKVTVQQVKEYCEMDSVEEMEYKQMMQEKIKETKDFMK KKVIEIEKTRVHPTLFLQTNMTSI</aaseq>

Gene Sequence

<dnaseqindica>1979..2266#1274..1497#878..917#731..733#aaacgccgacgccgaaattccgaaacctcctcgccgcggcgccgccccgggagccctagcgcgcgccttccctccgccgcccggagcgggccgaccaccaccaccgccacctcgcagggtcctcgccccctcgagtggatcggcctgaatccgggggcctggatttgatcgcgctaggtacgggaacccccatgctttcttggattttgatatctttgccctttcgtttccgtcgtcgtcttcgagttcgagatcgatttcccatcctggttaattccgctcctcctgctaggctgcccattttgtagaaatgtcgtctctgtcaggggacgatcttggtctgaaatctgggcagtgttcttatgattcttttttttcttttttgtgagtatattcggtatctgttgaaatttgtgtgatcatattcgattgaagagcctatttatcaaaggttttcgtggtaataatgctttgtgctgcttttgaaacgcttggattggatacattgttcttatggcaattgacgatgcaattgtccctctttctcttttttcctactattaccacaatagtgatgcaattgtcgctcttttttcttctcctatcacaacaattgtagttctattggataatcgtttgctgagtgaataatatttcttttcatctatgcaggtgtgtaacttgtggacttgggctgtaaatagctcagggaccgacaaagttattaaaaatggtatggctgattgtaattcttgcttctgccacgcccatcaatcttgtgatcctcactttatctgttaaaactgagttgcatctagctccgatatctatctggtttgttgttgtgacgaactgattactttttgtgtatcttcaggtggttcttgctgcttctatcatctcaaagtcaggaaaaggtatgtttccatcatttcggttttctttaataaaagtattagttgtatctgtaattgtctactgtttgtcaccggctcaccgcatgccaattggagtcataaagcaatagcattctgctactaattgctgaaaaagcatcggagagctttgctgctgttaccgtactgcctgttcgttaagacttctaaattctacagtcaattggttgacctaataccaaaactgttttgtgtttaacaagtaacaactgtaaggattttatagctgtcaattactatttgtttcatgatccttgagggtaacttttgaggttcctaggctgaatgatgttttggttgttccttctcaattgcagcacttgtttctagacagtatgttgacatgactcgcataaggattgaaggattacttgcagcattccctaaacttgttggaaatggaaagcagcacacttacattgagactgaaaatgtccgttacgtttaccaacctattgaaggcttatatcttgtagttatcacaaacaaacaaagtaatattcttgaggatctcgacacgttgaggctactctccaagcttgtatccttttcttgtatctttagccttctgattttaggaatctactttactaaaatcttatgttcttactccctcaggtcactactatatgatgcttaacactaatttcgtttttaacactaaagttagtgtcaagcatcacatattaatggctggagggattattaaatgaaaaccaaagaacattgtcagaataattgaaaacgttattgaacattattttcttgaggaatgaaatgtcgattataatgacacccacaaactgagactgatacctaggaaaggaaattacatagaaggcagatgattaatactgttcttgtttgatgaagatctgcattcacctcttacaactaagggtgtcatatgtcgagagcttgatttatccgttaatttttatgaatgttgttatgcttttgttgtttcctatttgttggcaactatccacagtcatggtctccttaaccttaacaatgtaaaggtgcctgaatactgcccctctctcgatgacgatggtgtttgtaaaacagcttttgagcttatatttgcttttgacgaagccatttctcttggaaataaggaaaaagtaacagttcaacaggtcaaagaatattgtgagatggatagtgttgaagagatggagtacaagcagatgatgcaagagaaaatcaaggaaaccaaagattttatgaagaagaaagttattgagattgagaaaaccagggtgcaccctactctttttttgcagacaaatatgacttctatttagctagtaggcaaaatagagctgttacttctatttagtcctcttttttttttttttttttttttttatcttggcctacttcggttacagttactatcagttccttcaatctttgatgattacttgagttacagtttatctgtctggatagacttatgttttttctagactagcttgttgggctttagaacctgtaagaatatatgataaatttagtactaacataatttctactagctagactgtatgatagccttaggagaaattaggtcaaacaagacaaaataaaattagagaaatatcatacaggaaacatatcccttggaatcatactacattattggttacaatgacctttctatacattacttgttattgtgtagctttcaatcgtaaattgttggtgtttatgcagatggagaaaggcaaacataacaaaggaggatactcatcaatatcaggtccccaggtgattgaaaaatctttcaatgacatgagcattagttgtactggatttggaagtggttctggattaggtggattgaacacagatacagacacatttactagcaggcccaaaggtattatttttcggtctattttaacaaatactacatgcagtattagtagaaatgcatattgtgtccattcctattgcctggtaacaattttatttatttatattttctcttcttctattttatcctggtttttcttatatatatctgagatgattccttcagtcttgaaagaccagatggtttggacatggtttatgtcaatgtttaacactttgaacatcaaaatcctttcgatatttaggtacgatgcatgagaatcatgaatatattgcagtgaaattagtgagtaaagttgtattttcaagacatgtagtccaaaacaagatttgttaagaccagaaggagcatgcattcagctagccttttagacttcaaacccttaaatatggtaacgtctgtggtgttctgtaaaatataatttaaatagttactaaacgtaaaattgtactgtttcagaataaaaataagtcatgcagcaaacataccagagctaacttgcatgctatatctgtgatgcaaagctatttattgtacaagtcggtggttgccataatgctgtcttaattgaacctagcctttcttttatctgtgtagattatctgctgattgattaaaatttatgttttcttctcagtcctgttatccagaatatttttttgtcaagtccttctcgacattttggtcaactatattttcttttctttaactgcaagaagaatttacaagatgttatgttattttgttctaaatagcaacctacctgcaggtcgtacatctggaggtactacaggtgctggtaaaggcattggaatgaaattaggaaatacaaagaagacgaaccagttcttagaatcattgaaggctgaaggtgaagtcattatggaagattttcaaccatgttctcttcagtcaaggtcatcgcctctaccaccgagtgatcctgtcacagtggctgttgaagagaaactcaatgttgcagtgaaaagagatggtggtgttaataattttgatgttcaaggaacacttgctctgctggtccttaatgatgcagatggattaatcctgttgcaggtaatttttttatatttattaacattattcttgtattgttgtcatatatgggaaatttgtactttgaaacagaataaaacaacataaaaaacattttcctttcttttttcggtgtgaagatatagtgatattgttttaataaatataatgctttccttctactatgatgccctttcacataaaatagattgtgcacagattttttttcttactccatggaaatgcggtgatgatcttcactgtaacatttgcaatgatttatgtttctaacgccatgcatttattgctaacaagcaaccttactgcacattgttttgggtaaccaaatctctttcttactattgtttggagttggtttattcactagttaatacttgctatcttgtagattgaaagccaagatattcctggacttagtttcaaaacacaccccaatatcaacaaggacttgtttaacagtcagcaaattctgggggcaaaagatcctatcaggcctttcccaagtggtcaaaatgaaactcctctagtgaaatggagaatacaggggatgaatgagtcatctttacctctatcaggtgcacattcacttctctctcttctctggtatctagtaatttggagttctaataacttgtttgctttgcatagtcaattgctggccatcaatattaggaaatgaaacctacgtcaacatcgagtatgaagcttctgagatgtttgacctgcacagtgtcatcatatctatacctcttcctgcacttcgggaggctccacgtgttagacagatagacggagagtggaagtaatattcctgttcctctaccgttctcttatgtatttgtaactactgcaaaattttgttgtgaattttttttatatttttgttgaaagatttcctttgcatgtccaggccaatgcataatgtctgctgttcttgcatcatgttgcctttttggcagatatttaagggggggggggggggggcacacgactgcatggcaatatcatattaagtttttatatgaaacattactaacggttactagtattctagtttttattgtttacggtagattcgaagtgttaatggatgtgactcctcggaatggcacttaactatttgattctattattcacgttgcattgtctggaatgctattacaaactcatccagactctgtcccttttgtatccttgagcttgtgtgcatatgctctctttctcatgccttctggtattttccctttctttgccctacaggtatgattcaagaaactcggttttggaatggtctattatccttattgatcaatcaaaccgcaggtacatgaaatctgtgaattccaaattatcattgttcttttatcttgtagtttatgctcttattactagctcttatttttgtgaaccattgcagtggatccatggaatttgttgttcctccagctgatccatcaatgttttaccccatatccgttggattttccgcatcgaatactttcagtaatgtgaaggttagtttgcccattttgtttgacagattctccttcccatctctccatttttgttaattctgtttgctggatattttcaggttactggaatccgccctttgaatgaaggtagcaaccctccaaagtattcgcagagggttcgtttggttgctgataattatcaagtggtttaacgctccagtaattgttaatcaatatcttgctcttgccatgtgcggctaagcagccatggcaaggagaatggttttggatgtacaaaatgtgtagacgagtttttctcctgtagcatgtttggcaagttgatttttcatcacctcttttttttggcaatcattgctggatatacactcaagaaaggcattcagttctttgagccaattaaatttcacattagtgattttaggagcaaatataatataacttggttcatgtcccaaaatcattccacaaccacaacatgtgcgtacatcttgagctaagttccc</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0368000, RefSeq:Os08g0368000