Os08g0369000

From RiceWiki
Revision as of 12:58, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0369000| Description = Similar to Permease 1| Version = NM_001068188.1 GI:115476113 GeneID:4345399| Length = 2185 bp| Definition = Oryza s...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os08g0369000

Description

Similar to Permease 1

Version

NM_001068188.1 GI:115476113 GeneID:4345399

Length

2185 bp

Definition

Oryza sativa Japonica Group Os08g0369000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:17281684..17283868

Sequence Coding Region

17281685..17281929,17282031..17282127,17282237..17282323,17282551..17282609,17282709..17282800
,17282877..17282954,17283079..17283239,17283342..17283554

Expression

GEO Profiles:Os08g0369000

Genome Context

<gbrowseImage1> name=NC_008401:17281684..17283868 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:17281684..17283868 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>attgggaggtgcgtggagattgggcttccaatgcttgtcctgtttgttgctctttcccaatatctgaagcatgtacaagtgcgccattttccgatattggagaggttctcagtgctcatttcgatcgcgcttgtctgggtttatgctcacatcctcacagcaagtgggacatacaaacatacctctctgctcacccagataaactgccgaacagaccgtgccaatctcatcacttctgcagactggattgacatcccatacccactgcaatggggtccgccaacattcagcgcagatcatgcatttggtatgatggctgctgttgtggtgtccttgatagagtcagctggagcattcaaggctgctgcgcggttggcgagtgcaacacccccaccaccatatgtcctcagcagaggcattggatggcagggaattgggctgctgtttgatgggctatttggtactggaactggctccacggtctctgtagagaacattggtcttcttggatcaaccaggattggcagcagaagagtgatacagatctccgctggtttcatgatcttcttctccattctagggagatttggggctctgtttgcttcgattccattcacaatgtttgccgccatatactgcgtcatgtttggatatgttggtgcagtggggctctccttcatgcagttcaccaacatgaactcgatgcgcagcctcttcatcatcggcgtctcgctgttcctcggcatttccatcccggagtacttcttccgctacaccatgagcgctctgcacggccctgcacacaccagggcaggatggttcaatgactacatcaacaccgtcttctcctcgcccccgaccgtcggtctgatcgtcgcggtgatcctcgacaacaccctggaggtgagggatgcggcgagggaccgggggatgccatggtgggcgaggttcaggacgttcagaggcgacagccggaatgaggagttctacaccctgcccttcaacctcaaccggttcttccctccatcttaa</cdnaseq>

Protein Sequence

<aaseq>IGRCVEIGLPMLVLFVALSQYLKHVQVRHFPILERFSVLISIAL VWVYAHILTASGTYKHTSLLTQINCRTDRANLITSADWIDIPYPLQWGPPTFSADHAF GMMAAVVVSLIESAGAFKAAARLASATPPPPYVLSRGIGWQGIGLLFDGLFGTGTGST VSVENIGLLGSTRIGSRRVIQISAGFMIFFSILGRFGALFASIPFTMFAAIYCVMFGY VGAVGLSFMQFTNMNSMRSLFIIGVSLFLGISIPEYFFRYTMSALHGPAHTRAGWFND YINTVFSSPPTVGLIVAVILDNTLEVRDAARDRGMPWWARFRTFRGDSRNEEFYTLPF NLNRFFPPS</aaseq>

Gene Sequence

<dnaseqindica>2..246#348..444#554..640#868..926#1026..1117#1194..1271#1396..1556#1659..1871#gattgggaggtgcgtggagattgggcttccaatgcttgtcctgtttgttgctctttcccaatatctgaagcatgtacaagtgcgccattttccgatattggagaggttctcagtgctcatttcgatcgcgcttgtctgggtttatgctcacatcctcacagcaagtgggacatacaaacatacctctctgctcacccagataaactgccgaacagaccgtgccaatctcatcacttctgcagactggtttgtactttgtggatttttcttcaattttcatgtgatctttggtactagtagatttctaatgttcatccttttttaaaaaaaatatatttttttttcaggattgacatcccatacccactgcaatggggtccgccaacattcagcgcagatcatgcatttggtatgatggctgctgttgtggtgtccttgatagaggtaacatttcattactgtgaaatctataccaagctgtttaagataagtatcttgttagcatatgtcattatactgatctgatttggtgacaattttttgagtgattcagtcagctggagcattcaaggctgctgcgcggttggcgagtgcaacacccccaccaccatatgtcctcagcagaggcattggatggcaggtttgtttcttcatttctgcaaatattcaaagattacacaatgcaaggccattcttaaaatcctagttgtgatcagattagtagaatcttggccacatgaatgcaagacctttcttagaatgaatttaatcatctgagtagcattaggatctgagtagctctacaaaaatctgtattctgctgttgatcaggagtataatgcttttgccctttatgtgaacaatcagggaattgggctgctgtttgatgggctatttggtactggaactggctccacggtctctgtgtaagtgttttccttctttatcgaaaactatttactctccgatatcctctagcactatcatgtattcctaacataatgcatacgatttcgccaacgcagagagaacattggtcttcttggatcaaccaggattggcagcagaagagtgatacagatctccgctggtttcatgatcttcttctccattctaggtagcacattttctgcacaaaaagattatgatcctgaatcacctttcctggttctcaacacgtctcatgatttcagggagatttggggctctgtttgcttcgattccattcacaatgtttgccgccatatactgcgtcatgtttggatatgttggtaagtgtcttaggtatcaaaattaccgatgttcttctcacatatctttctttcttatatctattcattttatcaccaagatttcaaccctctacaacacatgtcttgctggatcttttctcaggtgcagtggggctctccttcatgcagttcaccaacatgaactcgatgcgcagcctcttcatcatcggcgtctcgctgttcctcggcatttccatcccggagtacttcttccgctacaccatgagcgctctgcacggccctgcacacaccagggcaggatgggtatgtccactgaaactgaattttttttctgaagttgtgttctgaaacttataaacctcatgatcttttttttttctcttttctctgtgtggtgtgtggcagttcaatgactacatcaacaccgtcttctcctcgcccccgaccgtcggtctgatcgtcgcggtgatcctcgacaacaccctggaggtgagggatgcggcgagggaccgggggatgccatggtgggcgaggttcaggacgttcagaggcgacagccggaatgaggagttctacaccctgcccttcaacctcaaccggttcttccctccatcttaaagacaagctcttggaggcaaggagagctaaagcattaggaatggaagccggccattgagtgaatctaaccatccccaccatggttgtaattgtggttgtgttctccatagtgaaactaagagtagagaggtagatgtagaagaagtagagcaaaagaaatgctgggaatggctagaaactccagtctttaccagcaagaacaaaaaaaaggatggaaattggttgggtttgatggaatgcttgcctggattcattgtacatgcattttgagttcatggttagtgatgagcaatgagattgacttgatctgtttc</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0369000, RefSeq:Os08g0369000