Os08g0369300

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Revision as of 12:58, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0369300| Description = Similar to ARP2 (Actin-related protein 2)| Version = NM_001068190.2 GI:297608477 GeneID:4345402| Length = 5750 bp| ...")
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Gene Name

Os08g0369300

Description

Similar to ARP2 (Actin-related protein 2)

Version

NM_001068190.2 GI:297608477 GeneID:4345402

Length

5750 bp

Definition

Oryza sativa Japonica Group Os08g0369300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:17291627..17297376

Sequence Coding Region

17291627..17291783,17292992..17293053,17293265..17293348,17293529..17293595,17293822..17293880
,17294458..17294583,17294653..17294721,17294792..17294900,17295123..17295226
,17295765..17295814,17295943..17296021,17296114..17296185,17296330..17296464
,17296558..17296668,17297335..17297376

Expression

GEO Profiles:Os08g0369300

Genome Context

<gbrowseImage1> name=NC_008401:17291627..17297376 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:17291627..17297376 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggacagcgggaacgtggtggtgtgcgacaacggcaccgggtatgtaaagtgtggctttgcgggagagaacttccctacatctgtgttcccttgtgttgttgggcgaccattgctccgttatgaggagtcactccaggagcaggaattgacggatattgtggttggagcggcttgtgctgacttgaggcatcaacttgacgtatcatatcctgttacaaatgggattgttcaaagttgggatgatatgggccatatatgggatcatgcattttacagtgagctgaaagttgatccttctgagtgtaaaattctactgacagatccaccactcaatcctgtgaaaaatcgtgaaaaaatgattgagacaatgtttgagaaatacaactttgctggggtattcatccaggtccaagctgttctttcgctatatgctcaaggtttgctgactggacttgtcatagactctggtgatggtgtcactcatgtggtgccggtagttgatggattctcttacccacatattacaaaaagaatgaatgtagctggaaggcacataacatcttatcttgttgatctactctcaagaagaggcttgctgtcacatttcatagaattgaaaagggaaaatatgtacagctatgattacaagcgtgaataccagctaggacttgaaaccactatccttgtcaaaagctacactcttccagatggaagggtaatcaaagtgggcactgaacggtttcaagctcctgaggctctttttactcctgatcagtaccaacataacattgataaaacatttgttgagcaggaactcatagatgttgagggtgatggaatggcagatatggcgttccgttgcattcaagaaatggacatcgacaaccggatgacactttatcaacatattgtcctgagtgggggaagtaccatgtatcctggtctgccaagtcgactagagaaggaaatgcttgatcgctatcttgatgtggttctgaagggaaacaaagatggactgaagaaattgcgtttgcggatagaggatccgccacggagaaaacacatggtttacctgggtggtgcagtactcgctggaatcatgaaggcaggaataccaggaagaaggccttgcgtgcctaaggaagtgtggacaagcatagccgtcgagcgtgccgtcccaggaaaggccagcattcagagagcacttacaacccaactccgcaagggcatgcgccacacgattacaagatctagggcaatacaaagaagcaaaggaagcagcaatcactcttttaatctcaacgatgacgccttccttccttga</cdnaseq>

Protein Sequence

<aaseq>MDSGNVVVCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEES LQEQELTDIVVGAACADLRHQLDVSYPVTNGIVQSWDDMGHIWDHAFYSELKVDPSEC KILLTDPPLNPVKNREKMIETMFEKYNFAGVFIQVQAVLSLYAQGLLTGLVIDSGDGV THVVPVVDGFSYPHITKRMNVAGRHITSYLVDLLSRRGLLSHFIELKRENMYSYDYKR EYQLGLETTILVKSYTLPDGRVIKVGTERFQAPEALFTPDQYQHNIDKTFVEQELIDV EGDGMADMAFRCIQEMDIDNRMTLYQHIVLSGGSTMYPGLPSRLEKEMLDRYLDVVLK GNKDGLKKLRLRIEDPPRRKHMVYLGGAVLAGIMKAGIPGRRPCVPKEVWTSIAVERA VPGKASIQRALTTQLRKGMRHTITRSRAIQRSKGSSNHSFNLNDDAFLP</aaseq>

Gene Sequence

<dnaseqindica>5594..5750#4324..4385#4029..4112#3782..3848#3497..3555#2794..2919#2656..2724#2477..2585#2151..2254#1563..1612#1356..1434#1192..1263#913..1047#709..819#1..42#atggacagcgggaacgtggtggtgtgcgacaacggcaccggggtaagcccgccctccccccctcctcccgcagcctgatccctgatccagcgtggcgacctccctccctccctctctacctccacgctcctgcccctagatctgcaccccctccgtcccggttcttcttcttggacggtttcttggatttcttctgaaatttcctgaatatatacgataggattgtttctctctctttggttggggagtaattagcatctgtgctctagattcatttgtgccgaataagttttgctgcttactactgagctgtaattaatctaggatgaaatgatacgtgtgcacattgcaagaaattgaagggggaaattgctctagtatggtggaattattgttctccacataggcaggaaaaattgctgtaatacgatgagattattgttctctgttgaatctttagataatgtccttccaaatgcggaactggaatagataatgttcattcatataaaccacattagtttgatattttgcggtccaaaagaaattatgctgttgtctttggcttagtttctgttaagtattttccacatcattcctgtggcttgatgttcgatatgcttaaagccttaaacaacagcagaacatatcatattcataggtgatcttgttaatttctaattcggtacctaatggctaatgttgcagtatgtaaagtgtggctttgcgggagagaacttccctacatctgtgttcccttgtgttgttgggcgaccattgctccgttatgaggagtcactccaggagcaggaattgacggtctgaaatcaatgtctatctttgtgtttctggcattccctcattctgtctctctctcagtacaccttataattgtgattgtgttccacgcaggatattgtggttggagcggcttgtgctgacttgaggcatcaacttgacgtatcatatcctgttacaaatgggattgttcaaagttgggatgatatgggccatatatgggatcatgcattttacagtgagctgaaagtatgacttttcatatgatttatattactttaacatcagacccttttaaatttatatgctcataattcatcaacattctccgttatgtgtcttgaaatctcttagctctaggtaaatcaatgtatttctattttgtttctttaggttgatccttctgagtgtaaaattctactgacagatccaccactcaatcctgtgaaaaatcgtgaaaaaatggtaggttgttttctcccatctggctgttctgtactatgaaatttgttttttaagatatcactaactagcaaattgaatcctacgataaatagattgagacaatgtttgagaaatacaactttgctggggtattcatccaggtccaagctgttctttcgctatatgctcaaggtactctctctctctctctccccttccccccctctcagtatacagacacatgtatgagcttgcacacctacaaacacaaaatgtactggttcttttcttaacatgtattatgtttgtatcctttccaggtttgctgactggacttgtcatagactctggtgatggtgtcactcatgtggtatgataataatagtcttccctatattgtacaatctacaaagatttgaaatgcagagattccatttctgttaatcttgtggtgcactacaaaaatatctatctgatgcatgtttataattttctactgtgctaatgggtattcctcaactcaacaactaagaggatctacctttttttgttgatccagtgaagatgtatgaccaagactatatgcataccttgtttccttgtaggcggcttagtagaaatcacagccattgaacaccataatctatgatttctggtcaaaatgtcgatcatggaaataaaatgataatttaaactatactccatagtccatagttagtatggcatgctagtgcccgtttagttattctcgcacatagccagttaacattgtaaggttatcaccaacgtgtgtagtaagtagtaagcacaaaaagttaagcaattgaatactgactattgtcaatttgcaatgtgaaagaaagttttatctagatttacttttgcccgtcatgtttattatgatccaggtgccggtagttgatggattctcttacccacatattacaaaaagaatgaatgtagctggaaggcacataacatcttatcttgttgatctactctcaagaagagggtaatactctttatcatttttatatgtttgtagataaaagatgctctgaaaacacaggcttatgcaattgtttgcttcagtgtttttcttatcaacttaatttcgtgctttaaaggtatgctatgaacaaatctgccgactttgaaacagtccgggaaataaaagagaaactatgttatttaaggtcagttgctttattgttcttaattgttttcgctatagcttgctgtcacatttcatagaattgaaaagggaaaatatgtacagctatgattacaagcgtgaataccagctaggacttgaaaccactatccttgtcaaaagctacactgtaagtatgttaacctgctttgtttctatttggtccctttttgtattattggctgaacttttgtcatcagcttccagatggaagggtaatcaaagtgggcactgaacggtttcaagctcctgaggctctttttactcctgtaagcttgtactcatactattctttcatagcttgctgatatacattaaggcatgcatttctctgttaggatcagtaccaacataacattgataaaacatttgttgagcaggaactcatagatgttgagggtgatggaatggcagatatggcgttccgttgcattcaagaaatggacatcgacaaccggatgacagtatacagcttacccatacaatatgctatattttgttgctccaatcttttcacttgcttttgtttatcttcaagtatttatttgtaacattgttgatgaattgatgagttagatatagaacctctgtagtcttcaattgaaatttcgaaggcacactttgaattcaactacacatggcttgtctagtgaatttgtgcataagataatctttgataatttaggattactttgttttgttatttggtagcaacttgataagaccatggttttgcataaaaaatccacttacatatatacatgatttttatgttgttgtcttaaattagaacttgcacaggtaaacaccataagttgaattactgtcaaatgctgaacacacttccaaatgttgataatttttcatatttagtacatgtgtatgtgttaatgtaaattaagtcaagaagggacaaataaatgccagttatgttagtctctatacttgattaattgtattttaagttgttatgaagtacttctagataagcattggatcatgtgttcttctctcattggatgtctggataacatcttgcagctttatcaacatattgtcctgagtgggggaagtaccatgtatcctggtctgccaagtcggtaagatttgacaaacatatcccgctctgtcttcttttgtttactacagtacatattaacgattagtttcaaacaacactatttttacactgaagctcacatcatttttggtggtctatgccactctgattttttgcctgttctatttcttaccaatgtatgtgtttagctgtttttataagcttcaatattgggtatgacttaacacattacaacatttttgaagactagagaaggaaatgcttgatcgctatcttgatgtggttctgaagggaaacaaagatggactgaaggtaatatttttttgtggttattttgtagctgacaacagttgaaaatttcataagcttattgaaatcaaacacaaggaaattcccaagttttttttccagtgcaacacattttcttattcaataatggatgttgtcttttcagtaaggaatgtgaccattttcacttctgtctatgtgcagaaattgcgtttgcggatagaggatccgccacggagaaaacacatggtttacctgggtggtgcagtactcgctggaatcatgaaggtaatatacttttcccacagcgttatatatctatcggttattataagcaaagccttgggacaaagtagagaggtgaacagaaaaggagcacaaaagatgaaatcatgcattactgtgtgtgcattgtcgcatgggaatctgctcattttgctttattactttgctgacggctgttcacctagcaggattcacctgaattctggattacaaggcaggaataccaggaagaaggccttgcgtgcctaaggaagtgtggacaagcatagccgtcgagtatgttcctatgatcctacctagattctcatcaacagcagatgtgaaaggctctctcattctgtttgcaggagacaaaaaggaaacctatgtttagatgatggatgcacattacttgtagaaagatgagcacatagtgttgtttgttgtccctattgttcaggatacttgttggtgcatgttgtagcctagaagccactatgaacacaaactcaccatataaccatgatgagcaaacattagatatatttcattttctattggtaatatacctatgaacacaacacatatttctacttactatattatgtactggtgagctgatgctcttcatttggtccctgtactgctagggcaaatcaatttactgatagggaaagtcaatttacaacgaagcccttaacattagaattgctttgagatttgtgcggatggcatatatttcaatggatcgcaatattgtattcttctttttagtatatcgtgaatcttaacaaaacatctaattgttcagcatagcacttatattgtaaaaatcatcttctctactgttgtatgaaactttttgctgcctatatttatcttcatccaagaaatctgtgagtttcttaatcagctgcaaacttttagcaagttctgtgctttaactcagcccatttaggaaaggtcatgttccattttccaaaattgtactctttgctcaaatatattttctgaaattgtttcttttccgtgtttggtagaatttgaattattttccgcattttaacacaagatgtttggcagaatttgaattgttcaccgcatttaacacgaagatattgtgctaaatcaatagttaaatgccttgcatacgatgttgctcttggtgaacaacaatccattgtccaatgatgtgcaagcggggaattctgaatttatgagacgcaaccaagccagggtagtggctccaatgattcaaaaatgtaaggattgcggaaaccagaattgaataaccaaaggaatcccaaaattacagagttctagtccaatctgaaacgaacggtaccatcaaattcctctgaatatgcgtgccaggatacctcttttgcctttcttctttttttcttttcgatcttttgccttcctttttttttttgataggaaaagcttttattaacttaacggcctggctaaattgccatccaccatactctccatgcccgtaggcgtgccgtcccaggaaaggccagcattcagagagcacttacaacccaactccgcaagggcatgcgccacacgattacaagatctagggcaatacaaagaagcaaaggaagcagcaatcactcttttaatctcaacgatgacgccttccttccttga</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0369300, RefSeq:Os08g0369300