Os08g0369600

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Revision as of 12:58, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0369600| Description = Similar to Cysteine-rich polycomb-like protein| Version = NM_001068192.1 GI:115476121 GeneID:4345404| Length = 3645 ...")
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Gene Name

Os08g0369600

Description

Similar to Cysteine-rich polycomb-like protein

Version

NM_001068192.1 GI:115476121 GeneID:4345404

Length

3645 bp

Definition

Oryza sativa Japonica Group Os08g0369600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:17305598..17309242

Sequence Coding Region

17305710..17306096,17307045..17307216,17307770..17307877,17308187..17308629

Expression

GEO Profiles:Os08g0369600

Genome Context

<gbrowseImage1> name=NC_008401:17305598..17309242 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:17305598..17309242 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagaagccgttacagctttgtccagggtcagtgaagatagattttgcctctgcctcgtatgctggcaaggcagatatcgctgctaccgcggcagcgctcttgcatgcgcttgggccgccccgaacacctccctgctatcagctcccactggcaaaagtaaattcatcactgccactatggcctccagtgatatgcccttcaacatttgcccagaagcgtcctatgtcattgcctagcccacctccggccaagaagctgcaagtgcagcagtcttcatccatgctgccacaagattttccaaagttagaggtattgccagttgaaaagcccacaaagttgcaggtgcggcggtcaccgcaacatgtatccccagcgctgaagcaagattcaccgaagatggagaggccattgttgccaaggcctgcaacctttattgacgtgatgctgagttctcaaaagccatctagcgaaatgtggtctgaaacaaaagatgtgacactgacaaggaaaacaaactgcagctgcaagtattcgaaatgcctgaagctgtattgtgagtgctttgaaaaaggcagatactgcattggttgcaattgcacaaactgttgcaacaatgttaatcatgagaatgcaagacaggatgctatcaatgttgcattggaacggaatcctgcagcttttatgccaaaagttttgaatagcacagcccacaactgtgagagcaaagcagcagagggtgatattgtgggtaaacatacaaaggggtgtaaatgcaagagaacagagtgtctgaagaaatactgtgaatgcttcaaagctagtgttttctgttcagagaactgcagatgtacgggttgcaagaattacaagagtaatgcagatagaatttcccagaagaacactgttcatgcgcatcatgtgcagaatcctgcttcaagtgggatggttggacaatctgtgataattttccatgcagcagaaaatgactccagtctttcattggctgcatctgtgagcgatcattccattaacaacaacacttcacatgtaattcttttgcagcatacttttcaaatttgtcacgggccctgcttcctgataggctga</cdnaseq>

Protein Sequence

<aaseq>MEKPLQLCPGSVKIDFASASYAGKADIAATAAALLHALGPPRTP PCYQLPLAKVNSSLPLWPPVICPSTFAQKRPMSLPSPPPAKKLQVQQSSSMLPQDFPK LEVLPVEKPTKLQVRRSPQHVSPALKQDSPKMERPLLPRPATFIDVMLSSQKPSSEMW SETKDVTLTRKTNCSCKYSKCLKLYCECFEKGRYCIGCNCTNCCNNVNHENARQDAIN VALERNPAAFMPKVLNSTAHNCESKAAEGDIVGKHTKGCKCKRTECLKKYCECFKASV FCSENCRCTGCKNYKSNADRISQKNTVHAHHVQNPASSGMVGQSVIIFHAAENDSSLS LAASVSDHSINNNTSHVILLQHTFQICHGPCFLIG</aaseq>

Gene Sequence

<dnaseqindica>3147..3533#2027..2198#1366..1473#614..1056#gtgtttaaaaaaagaaaaaaaggaaatagtcgtgcggcggtgtttccccttcttcctctcggcggcgacgccgactcctcgtgagttcgtccgccgccgccgccgccaccacctgcaccgatccccatccatcccgcgagcgagtaggggcgcgcgtcggttgtccggctgcttccgcggtatcctggtgagaatccatccatggctacgcacgtccactttctcagctctctctctccgcgtacccttttttcttctcgaatttgcgttaaccctagctgctgttctacaaatttgccttaagtttgttctcaaaatgttcgggggagttcaactgaacctccattttcccatgttagatccgccactgtttcgtagtgatcaaaatgacggtgaaaccgatgtgcatcctggcttcttcttttgttttatttacatgtgagttttgattgattttgctcagcctggaggtccaaatatttagtactgatcaatcccaaattcccaattgattttatctgtaatgtgctagatgatctcggagaagaggattgattttgtctgatcaggtgtttaatttggcaccagagtgggatctaggaagtggtgggaaatggagaagccgttacagctttgtccagggtcagtgaagatagattttgcctctgcctcgtatgctggcaaggcagatatcgctgctaccgcggcagcgctcttgcatgcgcttgggccgccccgaacacctccctgctatcagctcccactggcaaaagtaaattcatcactgccactatggcctccagtgatatgcccttcaacatttgcccagaagcgtcctatgtcattgcctagcccacctccggccaagaagctgcaagtgcagcagtcttcatccatgctgccacaagattttccaaagttagaggtattgccagttgaaaagcccacaaagttgcaggtgcggcggtcaccgcaacatgtatccccagcgctgaagcaagattcaccgaagatggagaggccattgttgccaaggcctgcaacctttattgacgtgtgagttctccatttcttggaatagtgagatggaatgctttgttgaagaaattgaaattgataacttcatatttgtgatagtatgatgcatacctttaaagttttataattcactgtttgccattgtttgcactaatgcatatatgagtttcttggattaattgagaaaattaggagaacagataatgaatatgtttcacatggtacgtaactgagttttccatttgctagtttaccttttcttagagcaagaattggatggagcactttactaaaggaggtaaattgtcttcttttctgtctcttcaggatgctgagttctcaaaagccatctagcgaaatgtggtctgaaacaaaagatgtgacactgacaaggaaaacaaactgcagctgcaagtattcgaaatgcctgaagctgtaggttccataataaatttcctccaattgctgcgtaagaattgtttttccatataatttttttcctatttgataaatataaaacaagttgttactatttttttagaactttggcgctgcttttattgctttgtagaatttttgttagaaatattatgtcagtagacactcttcaaccacaaagtttagaatacatgttcttgtgtgaaattaataaccgttagttggatttcatgttggttgaaagttgttttttgcaagctatctcttcttttcccttcctacctgtttctctgaacgcttgttgcaacctatttctctgaaggtttgttgcaattatgagatgctgcatttaacttttgcatgcttccatcattgatcaatttccttcctacctgcaaagcctttttttttttgttgcgaggaatttacacttgcaaggttaatggccctaggcttttttagtaataaccagagccaatgacctggtttcgtttgtaaccataatcacacattcacacatactagtcttttggtttgcctgaatttgtaggtattgtgagtgctttgaaaaaggcagatactgcattggttgcaattgcacaaactgttgcaacaatgttaatcatgagaatgcaagacaggatgctatcaatgttgcattggaacggaatcctgcagcttttatgccaaaagttttgaatagcacagcccacaactgtgaggtagggcatgatgtatcttattgcaagatggcatgttttctctgttcagattctaattctctagtagctagcctataagccttagttatccatatcatttttgggttaattgtttgcctgttcagtttgttcatgagcaaaaggtataataaaggacgatttcacactaggttgtgaacagtataaacaccggcttttaaccaaacctggtgggtaccaccataccaaaataaatgtataatgtgtatataccctctctgttaagacccaaaccccccctcccccctcccccccccccccccccgccccatgaattattgtaaaataccactaggcttgccatttcatatctcttaagttaagcgtgcatgtcgtcactttacaatttggaagttcaaaatacctgagagcatgctacgttttttcaccaagaaactgaaatgaaactggcaccctcaagttttgagacttagttggtgtcctaaactctcacagttaacgatgcagatattattttccagggactgaaattcatacattgttatgtcattagacaaagtttcatgtctacaagtcagttagatgttgtttccttggattctatttttgaatattctttgaggttcagagcaacagcgacacaaaatgcattgtaatggtcatctagaacttacaggtcttttccattgctagaaattaatttattgtcatgatattattaccactttattttgtttttcttggtacttttcctatgattcaatcagattggctaagtttgagtgcagtcatattttagcagttaaccagtcattgggtgcaaaaagcccatgtcaagatttaaggcaaagtttctcatatgaagaaccaatgagatgttcagctgcgtacttgtataacatatgcttccatgatgtgtatgaaactcattctatctttcaattccagagcaaagcagcagagggtgatattgtgggtaaacatacaaaggggtgtaaatgcaagagaacagagtgtctgaagaaatactgtgaatgcttcaaagctagtgttttctgttcagagaactgcagatgtacgggttgcaagaattacaagagtaatgcagatagaatttcccagaagaacactgttcatgcgcatcatgtgcagaatcctgcttcaagtgggatggttggacaatctgtgataattttccatgcagcagaaaatgactccagtctttcattggctgcatctgtgagcgatcattccattaacaacaacacttcacatgtaattcttttgcagcatacttttcaaatttgtcacgggccctgcttcctgataggctgatacttaatgtacaacacaatttaaggctatctactgcagcaatctggataagtgatgatagttgattagagaataatgcttttgtgtataaaacaaaataatccttctgagc</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0369600, RefSeq:Os08g0369600