Os08g0371564

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Revision as of 12:58, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0371564| Description = Carotenoid oxygenase family protein| Version = NM_001188615.1 GI:297726360 GeneID:9266922| Length = 3744 bp| Defini...")
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Gene Name

Os08g0371564

Description

Carotenoid oxygenase family protein

Version

NM_001188615.1 GI:297726360 GeneID:9266922

Length

3744 bp

Definition

Oryza sativa Japonica Group Os08g0371564, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:17433233..17436976

Sequence Coding Region

17433233..17433318,17433414..17433492,17434100..17434279,17435257..17435519,17435733..17435835
,17436851..17436976

Expression

GEO Profiles:Os08g0371564

Genome Context

<gbrowseImage1> name=NC_008401:17433233..17436976 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:17433233..17436976 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggtggatggtgtggtgaccttactagaggcaaggaagcttgtggggaaggtgatcctagcggggaggtcggtgcaagagcggcaactgtcattggttgggatggagctagggcagatggtggttagcaatttcgcaccagttgatgaaatcggtggaagaacagagatatggaggatagaagggacgatctcagatgattttcctgagggtgtttatatcagaaatggttccaaccctctctttggagccttgcacaaggtgaactcaatcttcggccagtctgaagacatctgggtcgagggagaaggcatgctgcatgccctctacttcaccaagagcagagaaggaaacacttggtcagtctcatacaacaaccgctacgtgcaatctgacacttttaatactgaaagggatcgtcagagaccatgcttcctctcagcaatcaagggtgaccctcttgccataatcgcagccagcattttgaacatgctgaggtttggcaaggtgtttagaaacatgagtaataccggtgtgtttgagcacgccgagagggttttctcagtggcagagaatgacattccctacgagattgacttggacaatcttggcacactgtgtagctgggtcgtcgatggtcagtggaacatgccattcacagcacaccccaaggtagccccagggtcaggagagttagtcatatatgggtttaacattgtgaagcccttcctaactattggagttgtctcagaggatggaaagaaacttgaacggaaggttgatctcaagctagaaagatgtacatattgccatgaaattggggtcactaaaatgtaa</cdnaseq>

Protein Sequence

<aaseq>MVDGVVTLLEARKLVGKVILAGRSVQERQLSLVGMELGQMVVSN FAPVDEIGGRTEIWRIEGTISDDFPEGVYIRNGSNPLFGALHKVNSIFGQSEDIWVEG EGMLHALYFTKSREGNTWSVSYNNRYVQSDTFNTERDRQRPCFLSAIKGDPLAIIAAS ILNMLRFGKVFRNMSNTGVFEHAERVFSVAENDIPYEIDLDNLGTLCSWVVDGQWNMP FTAHPKVAPGSGELVIYGFNIVKPFLTIGVVSEDGKKLERKVDLKLERCTYCHEIGVT KM</aaseq>

Gene Sequence

<dnaseqindica>3659..3744#3485..3563#2698..2877#1458..1720#1142..1244#1..126#atggtggatggtgtggtgaccttactagaggcaaggaagcttgtggggaaggtgatcctagcggggaggtcggtgcaagagcggcaactgtcattggttgggatggagctagggcagatggtggttgtccggcaaggatgatgtctcgatgatgccacaagacaaactggttcattgcatctcccaaaagttcgatcccctctggtttagggatgtctagctcgaacgtgacatgttcagcgtggaccttagctacctgcacccttgcatggtcgtctagaatgggggtgttgtggaattgtcgtataatcacagtatctggattatcccatgctgcccatcaatcgcccccacgagagtggtttttgcatgcgggagcacttatgggctgcctacaacctattgtgggttttgtatagaaaaaaaatcaaatctgcagtagtggtaccgccaatgaaaatcgattatcgccggctgtcacttaaggggtctacttataaatatagggctatttttacaagcatgtttgttatattcccatcgatggaaaccaattttcgctgatggctgctgaagagcaccgcctgaaaaaagaaatcataatattaaattgttttgaaccttttttttttaatttagaggtatagtagaggggagaacacttcagattccaattaattttcatcacatgcttttgaactccctgtttcttagaaaaccacccatcaactaaaaaaatagatattttacagctttccattaccataaccggatgaaatagaatacaacctgattttaatggtaatattcatgatttgaaatccaaatagtacgataaaaaaaccaagttagacagataggtagaaagtggtttaatataagtcaaaaaatatatattttgttgtgaaaatcatgaaaaccgctactaaaactgggtgtataatatcattacatttatggttgaattttgacttgttttaatagttgaaggcctaggggttataaaatatctgattttgtagttaatggatgtttcttatattattagacaaatccaatagttaaggggtgtagtttggactatcggaaaaatggctgaattgcaagtgctaatttatatgatggatctatccatgagcagagcaatttcgcaccagttgatgaaatcggtggaagaacagagatatggaggatagaagggacgatctcagatgattttcctgagggtgtttatatcagaaatggtaattttctttcaatctttcattagcaactagcaagctagcgaaaactattgtagtttaagcccttaactcttgacttttgtgctacgtcagttatgtgctcagatgctagttcacagtattacttttcacaatgctattattaggttcgcaaagtttgatcttaatttgctctagttctgaatagattaaaactcaaccaatataatgcaggttccaaccctctctttggagccttgcacaaggtgaactcaatcttcggccagtctgaagacatctgggtcgagggagaaggcatgctgcatgccctctacttcaccaagagcagagaaggaaacacttggtcagtctcatacaacaaccgctacgtgcaatctgacacttttaatactgaaagggatcgtcagagaccatgcttcctctcagcaatcaagggtgaccctcttgccataatcgcagccagcattttgaacatggtttgtaaataacttgcaccctctgtttttgtcggcaaggaactttttactactcttgtctctatcaaaatataattattactttaagtagctagaatgaatatagagtttacaataaagagaaactccctctatttgaaaatattatgtgtaacagccttttacacggtctccagccttattcttattcttcaactactaattttgtttataatatattattaatagtaacaaaattaacatcggatgaaaatacattcaaatacaaatctaatggcactatatgcatgacacaatacagatatattaattgttagctcaataattagtcaaaattttaattgttgactttatggaaaacaagaatatcccatattttagaacggaggaagtaatacatattagtttgctacacggtatacaatattatagttttaccattggcttctttcataatatattacaaacaagtatggacggagttgacatcataagaaaaatattttcaaatgttgatttctgttttgaaaatagggatgccacagggagtatgagttaaaacttccatgcttctcatacttcttatagatagctgaagtgacatggttagtgagattcttctgataaatgcaggagagaggccatgtaatatccatgtccaaacattgaacatattcaacaaactcatggtgcaagacttcaattttgcaggaagattgaaaaaattacaggtcttataaaaacaaacacggagtattttctatgttgacaaacatttgcaacttcacaatttcaattttgtcctctttgattttcgcccttgatccactaccacacatctctagtgaaccatagtaccctctgggtcataaagatttgataatagcattttcttctgttctagtgtcatatgctaaggcaccgtagttacgtagtgttcaagtgacactgatcattaattgcatatcttgctgtagctgaggtttggcaaggtgtttagaaacatgagtaataccggtgtgtttgagcacgccgagagggttttctcagtggcagagaatgacattccctacgagattgacttggacaatcttggcacactgtgtagctgggtcgtcgatggtcagtggaacatgccattcacagcacaccccaaggttggtccctctgcatatgcctctctgcctcttaaacatgtgaatctgaatacatgaagattatgtatcagtttgttttattcttggttaattgttccatattcaccagcattttctacagaagacttgccttctactatctcttttcagttttgttttgcgttgcttttggctataagtctcaacatctgtttgtcttccattttgatgaaatttacaagcacattactatcttaagagcaggagagaaagaaatttgaaaaaaaaggtagagagataatttaagcttatcaactagtggaaaaaaggtcaatagtgcagcacttgttttttcttgaaaagtgccattcacagattgacctaccttgacaaacatggtaaagaactggcttatagttttgtcaccttttaccattttattaatgctaaattcagcagttcttggagtatttaatatgttaggccaacatctagcataaaatgtatgcttgtgctaagaatatgagtgaccatgggaaacgttgggatgcttaattataattatttgatttgtacattaattctatttcatgttaccttattgcatccaatttttctatgggcgcaggtagccccagggtcaggagagttagtcatatatgggtttaacattgtgaagcccttcctaactattggagttgtctcaggtttggtagctctgtaatctcaattctttttctgcatatccttttaccaaaaaaaagtactaagtacatttgatcacgccaaacacattctgtagaggatggaaagaaacttgaacggaaggttgatctcaagctagaaagatgtacatattgccatgaaattggggtcactaaaatgtaa</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0371564, RefSeq:Os08g0371564