Os08g0374800

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Revision as of 12:58, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0374800| Description = Similar to UDP-galactose 4-epimerase-like protein| Version = NM_001068203.1 GI:115476143 GeneID:4345415| Length = 63...")
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Gene Name

Os08g0374800

Description

Similar to UDP-galactose 4-epimerase-like protein

Version

NM_001068203.1 GI:115476143 GeneID:4345415

Length

6317 bp

Definition

Oryza sativa Japonica Group Os08g0374800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:17658091..17664407

Sequence Coding Region

17658492..17658735,17658811..17658902,17659188..17659270,17659665..17659746,17660481..17660708
,17660800..17660901,17661065..17661200,17661327..17661376,17663949..17664158

Expression

GEO Profiles:Os08g0374800

Genome Context

<gbrowseImage1> name=NC_008401:17658091..17664407 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:17658091..17664407 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggtggagaagacggtgccgggcggggtgaggacggtgctggtgacgggcggggcggggtacatcggcagccacgccgtgctgcagctcctcctcgccggattccgcgccgtcgtcgtcgacaacctcaacaactcctccgagctcgccgtccgccgcgtcgccgccctcgccggcgaccactcccggaacctcgccttccacaaggttgacctccgtgacaagggagcactggaaaaggtttttgcttcaacaagattcgatgctgtagttcactttgctgggctaaaagctgtgggcgaaagtgtgcagaagccattgctttattacgacaacaatgttaatggaacagtaaatcttctggaagttatgtctgcccatggatgtaagaagttggtgttctcatcatcagctgcagtttatggatcaccgaagaactcaccctgcacagaagagtttcctctcactccaaacaatccatatggcaaaacaaagcttgttgttgaagatatttgccgtgatatctaccgtacagatcctgaatggaagattattctacttaggtacttcaatccagttggggctcatcctagcggataccttggggaagatccatgtggcattcccaacaatcttatgccttatgttcagcaagttgctgttggcaggaggccagctctgacaatactaggaaatgattatgcaaccagagatggtaccggggtccgagattacatccatgtggttgaccttgctgatggacatattgcggcattgcagaaactctttgagagctccagcatagggtgtgaagcatacaaccttggaactggtaaaggtacctctgtgctggagatagtcaaggcatttgagaaggcttctgggaagaaaattcctctgattattggcccaagacgccctggtgatgcggagattctattttcattacctgctaaagcagagaaggaactcaactggaaagcgaaatttggcatcgatgaaatgtgtagggatcaatggaactgggctagcaagaacccttatggatacgggtcacttgactccaccaagcagaacggacaccactcgtacggatcaattggctctcccaagcagaatggccactgcacaaatggattttctgaatccactaggcataatggtcacaacggatatggactggtcgactctgccaagcataacggcaacggccacttccactga</cdnaseq>

Protein Sequence

<aaseq>MAVEKTVPGGVRTVLVTGGAGYIGSHAVLQLLLAGFRAVVVDNL NNSSELAVRRVAALAGDHSRNLAFHKVDLRDKGALEKVFASTRFDAVVHFAGLKAVGE SVQKPLLYYDNNVNGTVNLLEVMSAHGCKKLVFSSSAAVYGSPKNSPCTEEFPLTPNN PYGKTKLVVEDICRDIYRTDPEWKIILLRYFNPVGAHPSGYLGEDPCGIPNNLMPYVQ QVAVGRRPALTILGNDYATRDGTGVRDYIHVVDLADGHIAALQKLFESSSIGCEAYNL GTGKGTSVLEIVKAFEKASGKKIPLIIGPRRPGDAEILFSLPAKAEKELNWKAKFGID EMCRDQWNWASKNPYGYGSLDSTKQNGHHSYGSIGSPKQNGHCTNGFSESTRHNGHNG YGLVDSAKHNGNGHFH</aaseq>

Gene Sequence

<dnaseqindica>5673..5916#5506..5597#5138..5220#4662..4743#3700..3927#3507..3608#3208..3343#3032..3081#250..459#ctgaatccctcctcctactcttctcctccccacattcccaaagagaagcttcgcggcctcctcctcctccacctcctccgcatcctcctccgagcccccagatccgccgcgcgtgctctcgcgggtggtggtgcttctggtcttgggggaggggaggggcgcgagcgagcgagcgaacgagcgagagagagagagagagagagaggaaggggagggagagggaggtgtgtgtgtgtgagagagagagagatggcggtggagaagacggtgccgggcggggtgaggacggtgctggtgacgggcggggcggggtacatcggcagccacgccgtgctgcagctcctcctcgccggattccgcgccgtcgtcgtcgacaacctcaacaactcctccgagctcgccgtccgccgcgtcgccgccctcgccggcgaccactcccggaacctcgccttccacaaggtcggtcacttgcaaatgctgcccctgcccctgcccatccgcctcctcctcctccatggatctctccctctccgtgcaatgcctcaattatttttatttttttaaacaaaaactttttctggtgcggctagatctctgcagagtcctgcgtgctacagtctccgcacagaacttcacaatgttgagttcttttttcccattatttttcgctgcattgattgcttgattttacctgataaccaagtggttttaccttcaaatttctcgactgctaattgggaaatgtctggctgtgccacatttccgatttctactcggtacggttcttttggatgttcccatcttactagtattattaagttagttttgactatggtgttagtttaataaatggcgatgcggtgttgtcgcaatttatggcaattgaaacaaaaatggcgttgcgaggatagctggtgcttcaacgtttgatttgctgctagatgttaaggttgttttccccttttctagctagaatttaggactcctttcttcattctacttggttagaggggaaaatgccagcgtattttggtttcgattcgaaacctgtcttctaattcgtgtgccagactgccagattgtcggagatattggctattggggatttaatacatcacctgatgtcaggaaaaaaacagtaattcattggcgttaataattgcgtaatacagatttgttattctggctgttatctgaaaaacaaatttgttactcttgtggcaattatttgatgtctcagtggttcttcaatggggaattaccggtcattttgactgtaattgtttaaccaagagtgtttgtgcggtacgcacaataatcctggcatgtaggcaactgccaaagtctacttttaattgtagggaatgggtttgctattgctttgcagttgtcaaattggattgtttgcatgtgacattgtctcccccagctgatttgtttaactcttccctgttggcactgccaactttgcacaattggcattcatttggtagctctgattgatatgctgtcctaattattacaattagagtggttggctaatttaaacaccgtcacagctagcatttgaaaagtaccttcctttttttagctaatttttaaagctcatagggcaactctgtactgatagtactatggtagttagcttggatttgatatgtgatcacttatcagtgatatattccaatgaaatgcttgtaacattataagagctgccttagtggatcccagaaggacaaccaaaaagggaggggaaaactagatgattgctttgctaattatgcttgctctgatgacctgccctttctccttttaagtgggctttgactttttttttgcccagaagctaatggatatcatgttgataaaagagcagcttctatatccattccttgaaaagaacagggccatagaagtactgatttatactggttgcagaattctgtatgtcgcatgaaggtattattgttagtcaaactgtatggaagatccatagattgacattgtagggtccatcatcccatttgagaccattataacacattttttttctttttatttgattccattgaatgatgttctgaactagaagccctttttggttgaactcataatatcaggttttaaactataaaccattttcttgttaaacattaaaatcgtgttctgaaccgggaccaataatttttgaaatcaaacttagtatcattggtacatatttgcttatcattagcattatgtgcttttgctttaagattcgcagggttttcttttggttgctactgaagtgggatcaatatttagtaccctgctgtcctgtgatgtctgactgtatctgtatctcctggtgaaatttgcttcaatttgttctaggtgcacatctgttgttatttgtgtttaagtcaatgagacaattggagttctgctatttggtcattcattgccttgtaaaagtgcatctattgaaagtgcatctattgacaagttaactttgtagatttctctttgaacttgccagacagaaccttataattctttgttactagtctgcatttcatatccctgaaaaattcatctaaatttggcagaggaatttcttggaggagcaagttatgtaccttcgcattcagagaaatgctaatggtctctttggcagcataactcctatgcctttgttcctagtcatgtgtcaggaagtgtgtttagagtgaaatacactgcactagtcagaaaacgtaatttgatatgagtaatgtctgatgtagttgtgattgtttggtatttcaactcggtatgatgatttcatgaaagcagcttctcttgttctgtgatcttgctttctttttcctacaagattagatatggcttcatgaattttgattctcattatgtgattgtactacaattttaaaaatgtttactgtcgaaagcattatattttttttcttccccttttagtctcattctgaaaaactatctaaaagttcatggacatggatgcaacttaccaccattactaatgcttttgcaggttgacctccgtgacaagggagcactggaaaaggtttttgcttcaacaaggtaaaacgtactggttttttagttatggtatctttactttatctggatgcttttctgtttccttgcatgcagaggcatgcccatcatcattacttgttctttattgttagcttctttgcttttcagattcgatgctgtagttcactttgctgggctaaaagctgtgggcgaaagtgtgcagaagccattgctttattacgacaacaatgttaatggaacagtaaatcttctggaagttatgtctgcccatggatgtaagaaggtatttatcctttgcactttgatacacatagtaacatcaagctctgtggactgtacttacaacaaataggttggattttgatatttttatttcgctggttacctttagactctggcattgacatactgttcctcctttttttttgtatgttcaaatgttgtagttggtgttctcatcatcagctgcagtttatggatcaccgaagaactcaccctgcacagaagagtttcctctcactccaaacaatccatatggcaaaacaaaggtctgtgtcccttcacttttcttttaatgagaaaatcttctaccattcataagttctccaaattgactacaattgtaaaaatgaactgcagcttgttgttgaagatatttgccgtgatatctaccgtacagatcctgaatggaagattattctacttaggtacttcaatccagttggggctcatcctagcggataccttggggaagatccatgtggcattcccaacaatcttatgccttatgttcagcaagttgctgttggcaggaggccagctctgacaatactaggaaatgattatgcaaccagagatggtaccggggtaatgcttttcacatgtatattcaatttgtcattatttgcgtctgtttaaatttgattaatccatgttagtacctttcaagattctgattctcatgttacgttgttagaaattagctttattttccttcaggatatgtccttgggggatgagacttgaatatttggcaaaatagtcagttactgattgtatctgctgcttggaactgtctgttcatttatgatatctaataagactgtgtccaatgtatgtgacaatgtagtatttcctaagaaacaaagaaagataacaaattaaaagactcgtaatattttttttcaccaaaggtgtgtgcccatccagtacttttactaagtgtgttcatgcaatttgctctttgctaccttagtcagctctctggccccacatttctaggaaccttttttgaagctgctatgcttctatggatatgtgtgtttgttgtatcgtgtcaggttaccttgaattctccatttagggcatctcattgaactattgggcaaatacttgcaagggatagtataatgtgcatttacttatgtcaatacttcttcatttcaaaacgtatttattcatctgacagttctagttataacctcttttttagatatgggatattaagttataacctctgatatttgggctgttgtaataacagtgattcgcatgtgtcatggcaacctttcattgtttaatgacacttacatgatttacaggtccgagattacatccatgtggttgaccttgctgatggacatattgcggcattgcagaaactctttgagagctccagcataggttagtccctggccttagatgatttttgaatacttatttgctagtgctttttacctcttttcagatgcagtaactagccgcttttatgtttattgcatgtttatttaggatattaaattttagttggacgaacacaaaacccttgttgtaaatgaacttgtataagaaacattctttcttgatagatagatatataagtttatcatgtgtagcaatacttaccattttatgtagcttatatttgatcttagaaccccaggtaaacaaggatatctctttgggggtatacataatctaatttattgttcttcttgggcaacatgaaactagagggattggactttatttatttatttttatttgaaccatgttttgaactttattgtacttgcagggtgtgaagcatacaaccttggaactggtaaaggtacctctgtgctggagatagtcaaggcatttgagaaggcttctgggaaggtatgctagattgatgtataatatgggaaattatctttttccactaactaggtgcattttaaggcacagtacttttctgtcatggtagtactaatcagtatgcattaatttatatatgaatagtaccacaatgctaagctcttgtcttgcctgttgagccttgtatgtgcttaagtttttttgcttaggtgattgttagcatttattgtagataaaatgctttctccagcttgcgcgccttgccaggatttgctttgttcttattttttttaattgctgtgctagaaaattcctctgattattggcccaagacgccctggtgatgcggagattctattttcattacctgctaaagcagagaaggaactcaactggaagtaagttttacatcaacggataatcacatgaacctttttcttggtttccacctaactggtattgtctttccccagagcgaaatttggcatcgatgaaatgtgtagggatcaatggaactgggctagcaagaacccttatggatacgggtcacttgactccaccaagcagaacggacaccactcgtacggatcaattggctctcccaagcagaatggccactgcacaaatggattttctgaatccactaggcataatggtcacaacggatatggactggtcgactctgccaagcataacggcaacggccacttccactgaccatgcttcagccttgagttggcctgtgggctccttgtacatgtgatgtatcgaaacgatgatccgagatcgttgcaggtcaacgatggattggcaggtcacacgaacatggtcgagcttagataatattctttcattgttcatcgttggctgaagaatcccactgcctgtgggtatatatttatctcctactttgagtgtattatttttctttcagatttgttgtaggaatgtgacatttagccaaccagctgattcgattctttcactgctaattgagctgcattatctgttacagagctttgactgattcctgtaccatatatctctttttgtgtattttatgatgtaatatttatgaaggggaattagtctaaaaccgatgctcatgttttctcttc</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0374800, RefSeq:Os08g0374800