Os08g0375900

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Revision as of 12:58, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0375900| Description = Similar to Nudix hydrolase 22, chloroplast precursor (EC 3.6.1.-) (AtNUDT22)| Version = NM_001068209.1 GI:115476155 G...")
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Gene Name

Os08g0375900

Description

Similar to Nudix hydrolase 22, chloroplast precursor (EC 3.6.1.-) (AtNUDT22)

Version

NM_001068209.1 GI:115476155 GeneID:4345421

Length

3612 bp

Definition

Oryza sativa Japonica Group Os08g0375900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:17722797..17726408

Sequence Coding Region

17722822..17723086,17724212..17724354,17725265..17725384,17725744..17725968

Expression

GEO Profiles:Os08g0375900

Genome Context

<gbrowseImage1> name=NC_008401:17722797..17726408 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:17722797..17726408 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtccaccgatctcaccatcccaccttccatggaggcacccggcgccgacatccaggcgctcatccagcgcctcaggctccaccgcccgcgcccctccccgtacgccgccgcggcggccccctcgcccgacgcggccgcgccgccggccgagctgctgttccgccctcggagggccgccgtgctgatctgcctcttccgcggcgccgccggcgagctccgtgtcctcctcaccaagcgctcctccaaactctcctcccactccggggaggtttctttgccaggaggaaaggctgaggagggtgatgctgatgatgcagcaacagcattaagggaggcaaaggaggagattggacttgatccagcttctgttactgttgttgcctctcttgagcacttcttgtcaaagcatcttctggtagttgtccctgttgttggcatactctctgatatacaagcatttaaacctgttcttaatgttgatgaggtggatagcattttcgatgtacccttggagatgtttctcaaggatgagaaaaggacatctgaggagcgtgaatggatgggacaagaattcacaattcattacttcaattacgagaaagggagtgagaagtacgtaatatggggtctgactgctggcatcctgatacatgctgcttcagttgtattccagcggccaccagactttcctgcacgaacagtgcaattcaacttgccgaagtactcaaaggagtgttcttcaatgccatga</cdnaseq>

Protein Sequence

<aaseq>MSTDLTIPPSMEAPGADIQALIQRLRLHRPRPSPYAAAAAPSPD AAAPPAELLFRPRRAAVLICLFRGAAGELRVLLTKRSSKLSSHSGEVSLPGGKAEEGD ADDAATALREAKEEIGLDPASVTVVASLEHFLSKHLLVVVPVVGILSDIQAFKPVLNV DEVDSIFDVPLEMFLKDEKRTSEEREWMGQEFTIHYFNYEKGSEKYVIWGLTAGILIH AASVVFQRPPDFPARTVQFNLPKYSKECSSMP</aaseq>

Gene Sequence

<dnaseqindica>26..290#1416..1558#2469..2588#2948..3172#gcagacccaagtgccaaagctttccatgtccaccgatctcaccatcccaccttccatggaggcacccggcgccgacatccaggcgctcatccagcgcctcaggctccaccgcccgcgcccctccccgtacgccgccgcggcggccccctcgcccgacgcggccgcgccgccggccgagctgctgttccgccctcggagggccgccgtgctgatctgcctcttccgcggcgccgccggcgagctccgtgtcctcctcaccaagcgctcctccaaactctcctcccactccggtgagctgtcctcggtatcatcgatcccaatcttttttctgcttctcctcgatatgatcgatcgatcggatactttgggcaaggtgagaagcctttgaggggaatgggtcaaattactggttatagtcttatagagtatcgccatttccagtgcttcttctttttacgattcgtaggtgaattgctgtttcgggcgtataccgctgcgaatttcttttttttttggaagaagttgcaaagcaataaactataatcgagtactacagttctaaattgtaatctcttacagaaatcttaggctgtcatcgattaatccaaggacgattttaccgtggtctcagctattccattaatgtggagggtggcgtttatgatgaaaccttttttttttcctcggcagagtctttgaccctatttatttggcgtaaatatatagcaagcatccaatgagcatcgatcatatttaaaaatgggtatcaattttgcattgacattagtgacataaaccatggcataataataggatggtggcctgacagttgtttgtaatgatatacgcgaaatggaccacatttgttttctgatgctggtttcacatattttagttatcctgagcacatgaggagcgtacttgcggtgttttgttgagttaacagtttggacaaatggttggaattgattgcatggttggatgctgataatgacattgaatctttggtgcttgcttggacaagtagggtgcaccagatgctaacaatatgcttcaaaaactatcatgcaatgcttgtactatgcaatattctaaggtgcatatgggctggtctccttatcagtgttgcactgttgctgctggcctaactgggtgcccttttttccctggtccacggaaaggctttgagctcagcaattgatttagatagggtaaataaaataatatgagttggttccttaattccaaacccatacaaccttcattttgctctgctcgttttggctgctacagattcaagctaaaaaatggtcctttagctgatccatctttttggctgcctcagagagcttgcttagctcaaattggcttctgaaacctgcttgatttttatttcttccatctggggtttgcaggggaggtttctttgccaggaggaaaggctgaggagggtgatgctgatgatgcagcaacagcattaagggaggcaaaggaggagattggacttgatccagcttctgttactgttgttgcctctcttgagcacttcttgtcaaaggtagaataccatttggctctcccttacaccacatgaaacagcaaggaagatggaactatacaccattttccttaataatattttagaaccaaacacgggcaactaaaccaacttgactcaggatctgcttatagatgttttgatgcataagctgctaactgttctttccaaaatcctttcttgtttggtagcaatcatgtttgcatgccacagaaaaccatattgtactttagtgctttgaattgatatcatgcatcgcaaatgaaacttaattctcaaagaccgaatattaaaattgtaagttgaaacgaaccaaattttgttaccaatgttactgtgggactataggtctttgcatggtgcacattattttttcattgaaggaactgtgaacatggtcacttttgctgtcttggttgtcttgtttaggttttgattacatctgaaggctagtcttactagtatgatccgtctgttgatggatcatttcacatgtcatttagctaatttgtcctttgaagtttgaattgtgctcgccacatgttttattaagactaacttggtacttgtgccttgtcatgtcatgaggtcaagtgaaactcatatagaaaattatccaaaattttcaattcattttacacatatataggtagtctcttcaaattgaattagctgggagaggctaattctatgttttttcatgtaaattactaactttgttgcactgttgcaattctaaaatgtagttcctttgcttcgcttcaatacttaatatccaactccactacaattcttatgctgttgtgccccactgttttaattacttttagtttgtttctactagcaatcagtaataagattactcttacaatgtcatcatcaggattaatattctccatatttttggcagcatcttctggtagttgtccctgttgttggcatactctctgatatacaagcatttaaacctgttcttaatgttgatgaggtggatagcattttcgatgtacccttggagatgtttctcaaggttggtattatcactgtcttttccaccatgctaattaaaggaccacacacatttccaggcttttatgtgaacctgggttgcatgtttgtgatatttccaacttataacaaaaaaacaaaggagaccagtttattgtgtaaaagataccaaccacatagttttccatactgtagttttctgtacagtggtaatataggttagagtttagacttaaccagaatagcatactattatagttttttttttcaacatatggaacaaactaggggataaagaaaccacttattttactgaaatcatggaatatctcagtgacttggtgtcatttctatcttcaacctgctgatcaaatactgcaggatgagaaaaggacatctgaggagcgtgaatggatgggacaagaattcacaattcattacttcaattacgagaaagggagtgagaagtacgtaatatggggtctgactgctggcatcctgatacatgctgcttcagttgtattccagcggccaccagactttcctgcacgaacagtgcaattcaacttgccgaagtactcaaaggagtgttcttcaatgccatgagcagcacctgtgaaacactaatgtttacaatacaatttcagttgtagaccattggggtgtacagcagagcagatttcatctcaaaagattggtactgaatcaaaaggttgttttatagtttatattctttgcacattttttgtacataatactatgagaacattaacatttatgaaaatgttaatgctattcgagtacaccccaaatccctgattagatgggagtaatccattataaatatgggtacccattagtccgctagttttactaaaaacacactttttctttatttctttatttgtaggtgaaatagagttgggcaatgggcacctatggattaaactactgtcatccctacccccagttgtcccaataagtattgatgtaaacaaagacttgtactaaaacagtttgtaatatgtcaaaatcaggttgagtcc</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0375900, RefSeq:Os08g0375900