Os08g0378900

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Revision as of 12:59, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0378900| Description = Similar to Thioredoxin protein| Version = NM_001068222.1 GI:115476181 GeneID:4345435| Length = 2028 bp| Definition ...")
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Gene Name

Os08g0378900

Description

Similar to Thioredoxin protein

Version

NM_001068222.1 GI:115476181 GeneID:4345435

Length

2028 bp

Definition

Oryza sativa Japonica Group Os08g0378900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:17906463..17908490

Sequence Coding Region

17906660..17906776,17906891..17906971,17907940..17908062,17908192..17908440

Expression

GEO Profiles:Os08g0378900

Genome Context

<gbrowseImage1> name=NC_008401:17906463..17908490 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:17906463..17908490 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccatggccgcggccgcctccctcctgccggcgagcgccgccccaaccctccccggacgcgccttccgcccgccccgcaactccaccccgacggcctccctctcctgcgatggcggctcccgctgccgcggcgtcggcctcggcgtcatcctcggtgggtgtcgcgcgcaaggcgttcgacggaatgccgcagccgagacctacgtcccaggctccggcaagtacatcgccccggactacctcgtgaagaaggtgacggccaaggaactggaggagctggtgaggggggagaggaaggtgcccctcatcgtggatttctacgcgacgtggtgcggaccctgcgtcctcatggcccaggacatcgagatgcttgcagttgaatatgaaaacaatgccctgtttgtgaaggtggatactgatgatgaatatgaacttgcaagagatatgcaggtaagaggacttccaacactgtatttcttcagtccagatcaaagcaaagacgccctaaggactgagggactgattcctattgatatgatcagaaatatcattgataatgaattgtga</cdnaseq>

Protein Sequence

<aaseq>MAMAAAASLLPASAAPTLPGRAFRPPRNSTPTASLSCDGGSRCR GVGLGVILGGCRAQGVRRNAAAETYVPGSGKYIAPDYLVKKVTAKELEELVRGERKVP LIVDFYATWCGPCVLMAQDIEMLAVEYENNALFVKVDTDDEYELARDMQVRGLPTLYF FSPDQSKDALRTEGLIPIDMIRNIIDNEL</aaseq>

Gene Sequence

<dnaseqindica>1715..1831#1520..1600#429..551#51..299#gaggcagagacaggataggattatctctcccacactcgctccccccagccatggccatggccgcggccgcctccctcctgccggcgagcgccgccccaaccctccccggacgcgccttccgcccgccccgcaactccaccccgacggcctccctctcctgcgatggcggctcccgctgccgcggcgtcggcctcggcgtcatcctcggtgggtgtcgcgcgcaaggcgttcgacggaatgccgcagccgagacctacgtcccaggctccggcaagtacatcgccccggactacctcgtggtacgatcctgcaaggctcgactcgcatttggcagtgagcctggctacgttcgaggagtctgctcgatcgagtcctacttgggtatctgaaacgggatatatctttccttcctcctttcatggttgcagaagaaggtgacggccaaggaactggaggagctggtgaggggggagaggaaggtgcccctcatcgtggatttctacgcgacgtggtgcggaccctgcgtcctcatggcccaggacatcgagatggtaatatgtgccctgcaaatcttacattccccgtttagtgtttgcttctctctaacgttgggcaacactctctgaccaattacaagtttgcgcacccttcccacgtagagttattactagcaatgaaagaggaaacacccataagaaaaagaaaaaaacaatcttcacatatgtttgaaaacatacattaaactgatttagggagtgtttaaagcttcacatgattttgaaaacatttgtatgatttagggtctctgaatgtctagctagcaccaaactgaactggggtgttagtaggtgtcatgtgccatgaatactctagtcttgttaattaagcacttacttatcaagattctaatccaaaatgagactacaacaattttaaccattctctacttagattagtaaagaaatggcagacccaacgtgtatgtctgtgcctaataacgaaagggaatgatatagccagtgcaagatgcctatgtccattccaaaatcttccctgaaatttgtggctgttacgctggtggtattctttgtatgctctgaatttgtcagagacaatattgcctttcctgcaagctccaccccagtgttcttgacaatctgaatttattgaagaaactttgatttaatatattcaacaatagtgtttccatcacatttgtatctagatcttccctaatattcttttatactccctccatttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaatctagacatatatatctatctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttatattgtgaaacggaggaagtaatacttataggtttcaagtaacttcaccaagtgccatatatacttataatgcaaactcattttttgcatcctcttgtactatcaactgatttcaacatttctgccatataatgtgtcagcttgcagttgaatatgaaaacaatgccctgtttgtgaaggtggatactgatgatgaatatgaacttgcaagagatatgcaggtatacacatcattgcacacactgagcaaagaaaatagtaatcatagttttgttttggtttataacttatttttacaatgttttctgaacactcaccatgggtgaaaaatacaggtaagaggacttccaacactgtatttcttcagtccagatcaaagcaaagacgccctaaggactgagggactgattcctattgatatgatcagaaatatcattgataatgaattgtgatcgctaggatatagggacatagttgagattttgatgtttgaagtattttagccactagtagatgtgatagatttgagctttctgatctttagtgggaaggttctgaatcttctggtacgcagagtctgcgtgtggaatgtagtatgttatatgtggggttcgtgcttcagactaacaagctactctataattcagtt</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0378900, RefSeq:Os08g0378900