Os08g0379400

From RiceWiki
Revision as of 12:59, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0379400| Description = Similar to Quinone oxidoreductase-like protein| Version = NM_001068226.1 GI:115476189 GeneID:4345439| Length = 1807 ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os08g0379400

Description

Similar to Quinone oxidoreductase-like protein

Version

NM_001068226.1 GI:115476189 GeneID:4345439

Length

1807 bp

Definition

Oryza sativa Japonica Group Os08g0379400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:17943708..17945514

Sequence Coding Region

17943986..17944251,17944356..17944515,17944615..17944938,17945034..17945456

Expression

GEO Profiles:Os08g0379400

Genome Context

<gbrowseImage1> name=NC_008401:17943708..17945514 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:17943708..17945514 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcaatccctcctctcctcctcggtgctcgccaacccatgcaccaccggctccccgctcttcccgccgaccgctgctaagctcgccgccgctgcctcggtcccggtggccgcggcggcgaggagtggcgccattgctgccgtgtcgaggagatcggccagtggcggccggtgcgtggtggcggctgcgtcgtcgtcgtccccggcggtgaccacggcggaggccggcgaggtgcccgcgacgatgaaggcgtgggcgtacgacgattacggggacggcagcgtgctcaagctcaacgacgccgcggcggtgccggacatcgccgacgaccaggtgctggtgcgcgtcgccgccgccgcgctcaaccccgtcgacgccaagcgccgcgccggcaagttcaaggccaccgactcccctctcccgacggtgccggggtacgacgtggccggcgtggtggtgaaggccgggaggaaggtgaaggggctgaaggaaggggacgaggtgtacggcaacatcagcgagaaggcgctggaggggcccaagcagtcggggtcgctggcggagtacaccgccgtggaggagaagctgctggcgctcaagcccaagagcctcggcttcgcgcaggccgccgggctgccgctcgccatcgagaccgcccacgagggcctcgagcgcgccggcttctccgccggcaagtccatcctcatcctcggcggcgccggcggcgtcggctccctcgccatccagctggccaagcacgtgtacggcgcgtccaaggtggcggcgacggcgagcacgcccaagctggagctcctcaagagcctcggcgccgacgtcgccatcgactacaccaaggagaacttcgaggacctgccggacaagtacgacgtcgtcctcgacgccgtcggccagggcgagaaggccgtcaaggtggtgaaggaagggggcagcgtggtggtgctcaccggcgccgtcgtgccgccggggttccggttcgtggtcacctccgacgggtcggtgttggagaagctcaacccatacctggagtccgggaaggtgaagccgctggtggaccccaaggggccattcgccttctcacaggttgtggaggccttctcctacctcgagacagggagagccaccgggaaagttgtcatctcacccattccatga</cdnaseq>

Protein Sequence

<aaseq>MQSLLSSSVLANPCTTGSPLFPPTAAKLAAAASVPVAAAARSGA IAAVSRRSASGGRCVVAAASSSSPAVTTAEAGEVPATMKAWAYDDYGDGSVLKLNDAA AVPDIADDQVLVRVAAAALNPVDAKRRAGKFKATDSPLPTVPGYDVAGVVVKAGRKVK GLKEGDEVYGNISEKALEGPKQSGSLAEYTAVEEKLLALKPKSLGFAQAAGLPLAIET AHEGLERAGFSAGKSILILGGAGGVGSLAIQLAKHVYGASKVAATASTPKLELLKSLG ADVAIDYTKENFEDLPDKYDVVLDAVGQGEKAVKVVKEGGSVVVLTGAVVPPGFRFVV TSDGSVLEKLNPYLESGKVKPLVDPKGPFAFSQVVEAFSYLETGRATGKVVISPIP</aaseq>

Gene Sequence

<dnaseqindica>1264..1529#1000..1159#577..900#59..481#agcagagcagcgcaaaacagagcagaccaagagcaaggagacgacgacgacgacgacgatgcaatccctcctctcctcctcggtgctcgccaacccatgcaccaccggctccccgctcttcccgccgaccgctgctaagctcgccgccgctgcctcggtcccggtggccgcggcggcgaggagtggcgccattgctgccgtgtcgaggagatcggccagtggcggccggtgcgtggtggcggctgcgtcgtcgtcgtccccggcggtgaccacggcggaggccggcgaggtgcccgcgacgatgaaggcgtgggcgtacgacgattacggggacggcagcgtgctcaagctcaacgacgccgcggcggtgccggacatcgccgacgaccaggtgctggtgcgcgtcgccgccgccgcgctcaaccccgtcgacgccaagcgccgcgccggcaagttcaaggccaccgactcccctctcccggtgatcacctctcctcaaattattaatccttcctgcacatggcattccaatctcctccgccattgctgagctgctgatggtgacgcgcggcgcagacggtgccggggtacgacgtggccggcgtggtggtgaaggccgggaggaaggtgaaggggctgaaggaaggggacgaggtgtacggcaacatcagcgagaaggcgctggaggggcccaagcagtcggggtcgctggcggagtacaccgccgtggaggagaagctgctggcgctcaagcccaagagcctcggcttcgcgcaggccgccgggctgccgctcgccatcgagaccgcccacgagggcctcgagcgcgccggcttctccgccggcaagtccatcctcatcctcggcggcgccggcggcgtcggctccctcgccatccaggtcaatcagccagacacccaccaccactgcattagcatccatcagcttaatttgcacctcacattcacgtggcctgaacgaacttcccgtacgttgcagctggccaagcacgtgtacggcgcgtccaaggtggcggcgacggcgagcacgcccaagctggagctcctcaagagcctcggcgccgacgtcgccatcgactacaccaaggagaacttcgaggacctgccggacaagtacgacgtcgtcctcgacgccgtcggtaagaccccctctccactcaccgccggcgagatgccaacctcaaacccctcaactaattacatatgtacctggctaccttcttcttcttccatggtgttccaggccagggcgagaaggccgtcaaggtggtgaaggaagggggcagcgtggtggtgctcaccggcgccgtcgtgccgccggggttccggttcgtggtcacctccgacgggtcggtgttggagaagctcaacccatacctggagtccgggaaggtgaagccgctggtggaccccaaggggccattcgccttctcacaggttgtggaggccttctcctacctcgagacagggagagccaccgggaaagttgtcatctcacccattccatgagagcttgacatcaatggcagagcttatgatggtctctcgcacctgagattctgattctgaagtgtgtcagcatagaccaaaatgaagtttatctcatattacagttcatagagttacactgttacacaagttgtatgcactgtgatgaactgctgagcaatgtccacaacccctctctagcaatgtccagttgatttgaacaggcaggtggtgccccgaatgtcccaatgttacatgagttttgctatgtaagggaaggaacatcgatataccgcgcc</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0379400, RefSeq:Os08g0379400