Os08g0380100
| Gene Name |
Os08g0380100 |
|---|---|
| Description |
Similar to Polygalacturonase isoenzyme 1 beta subunit (Fragment) |
| Version |
NM_001068227.1 GI:115476191 GeneID:4345440 |
| Length |
2557 bp |
| Definition |
Oryza sativa Japonica Group Os08g0380100, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 8:17992221..17994777 |
| Sequence Coding Region |
17992285..17994168 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008401:17992221..17994777 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008401:17992221..17994777 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggcgtctcctccccacctccccctcctcctcctcctcctcgtcgtcgtctgcaatgccgccggcggcgacggtgccagggtgaacccgttcacggcgaaggcggcgttcatccggtactggaaccggcgggtgcccaacaaccgcccccacccggccttcttcgtcgccaagctctccccgctccaggccgccgacgccgcctccttcgcagccgcgctcccgcggcttctcccgccgctctgcgccagggccgccctgctctgcccctccgcctccgacaccgagacggccgcctccctcgccgtcggcggcggcggaggtggtgggccgtttaaggggtatagtaatgccaacttcaccaactacggcagcggcggcgtgggcggcgccgacgggttcagcgcctactcccccgacctcaacgtcgtcggcgactcgttccggcggtacggccgcgactcgacgcggagggtggacacgttcgccagctacgaggcggaggggaacgtggtcaccgccaacttcacctcctacgccggcgccgccacgggcgggtcgggctcattctccgcctacgccgccgacaccaacgtgccggactccaccttcaccaactacgacgccgaggccaacggccgccgccgcgagttcacctcctactcccaggaggccaaccacgggtcgaacaccttcgccggctacggcaagaacggcaacggcctcagggagaccttcaccacctacggcaacgactccaacgtcatcgcctccggcttcaccaactacggcgagtccggcaacggcgccaccgacaccttcaccgcctacggcaaagaggggaacgtccccgacaacaccttccggagctacggcgccggcggcaatgccggcgtcgacaccttcaagggctaccgctccgagtccaatgtcggcgacgacagcttcgcctcctacgccaagggcgccaacggcaacgccgccgagttccagaactatggcggctcattcaaccccggcaccgtcaccttcaaaggctacggcgaagggagcaaccccaatcaccacattggcttcaaggagtatgccgggagcaacaattcattcaaggggtatgccaagtccggcgtcgatttcaaggagtaccacaacacgtcgtcggcagacgcggcgacgacgatgtcattggaggcggtgtcgtccggccaccagcatttgaagtggtcgccggagccagggaagttctttagggagacggagctggtgtccgggaacacaatgccgatgcctgacatcaaggacaagatgccacccagggcattcctaccaagggacattgccaagaagataccattcaagccgaatgcggtgtcggaggtgttcggggtgccgttggacactgcaatggggaaggcggtcacgtccacggtggctgagtgcgagcgagcgccgagccggggtgagaccaagcggtgtgcaacctcagctgaggacattgtggactttgccgtggagatgctaggcaatgacattgttgtgcgcagcacggcctccacggctggaagtggcgggcaaatcaggctcggcaatgttaccggtgttgatggtggcaaggtgacccggtccgtatcgtgtcaccagagcttgttcccgtatctggtgtactactgccactcggtgccgaaggtgcgggtgtatgaggccgatatcatggctgccgactccgatcagaagatcaatcatggggtggcaatttgtcacctcgatacttctgattggagcccaacccatggagcgttcatcgcgcttggtggaaaacccggtgaggttgaggtttgtcactggatcttcgagggtgacatgacatggacagtcgcggattaa</cdnaseq> |
| Protein Sequence |
<aaseq>MASPPHLPLLLLLLVVVCNAAGGDGARVNPFTAKAAFIRYWNRR VPNNRPHPAFFVAKLSPLQAADAASFAAALPRLLPPLCARAALLCPSASDTETAASLA VGGGGGGGPFKGYSNANFTNYGSGGVGGADGFSAYSPDLNVVGDSFRRYGRDSTRRVD TFASYEAEGNVVTANFTSYAGAATGGSGSFSAYAADTNVPDSTFTNYDAEANGRRREF TSYSQEANHGSNTFAGYGKNGNGLRETFTTYGNDSNVIASGFTNYGESGNGATDTFTA YGKEGNVPDNTFRSYGAGGNAGVDTFKGYRSESNVGDDSFASYAKGANGNAAEFQNYG GSFNPGTVTFKGYGEGSNPNHHIGFKEYAGSNNSFKGYAKSGVDFKEYHNTSSADAAT TMSLEAVSSGHQHLKWSPEPGKFFRETELVSGNTMPMPDIKDKMPPRAFLPRDIAKKI PFKPNAVSEVFGVPLDTAMGKAVTSTVAECERAPSRGETKRCATSAEDIVDFAVEMLG NDIVVRSTASTAGSGGQIRLGNVTGVDGGKVTRSVSCHQSLFPYLVYYCHSVPKVRVY EADIMAADSDQKINHGVAICHLDTSDWSPTHGAFIALGGKPGEVEVCHWIFEGDMTWT VAD</aaseq> |
| Gene Sequence |
<dnaseqindica>65..1948#attaatctctcctcttccaaatcccctctcctcccccccaaatctgcaccaccgccgcgccgcaatggcgtctcctccccacctccccctcctcctcctcctcctcgtcgtcgtctgcaatgccgccggcggcgacggtgccagggtgaacccgttcacggcgaaggcggcgttcatccggtactggaaccggcgggtgcccaacaaccgcccccacccggccttcttcgtcgccaagctctccccgctccaggccgccgacgccgcctccttcgcagccgcgctcccgcggcttctcccgccgctctgcgccagggccgccctgctctgcccctccgcctccgacaccgagacggccgcctccctcgccgtcggcggcggcggaggtggtgggccgtttaaggggtatagtaatgccaacttcaccaactacggcagcggcggcgtgggcggcgccgacgggttcagcgcctactcccccgacctcaacgtcgtcggcgactcgttccggcggtacggccgcgactcgacgcggagggtggacacgttcgccagctacgaggcggaggggaacgtggtcaccgccaacttcacctcctacgccggcgccgccacgggcgggtcgggctcattctccgcctacgccgccgacaccaacgtgccggactccaccttcaccaactacgacgccgaggccaacggccgccgccgcgagttcacctcctactcccaggaggccaaccacgggtcgaacaccttcgccggctacggcaagaacggcaacggcctcagggagaccttcaccacctacggcaacgactccaacgtcatcgcctccggcttcaccaactacggcgagtccggcaacggcgccaccgacaccttcaccgcctacggcaaagaggggaacgtccccgacaacaccttccggagctacggcgccggcggcaatgccggcgtcgacaccttcaagggctaccgctccgagtccaatgtcggcgacgacagcttcgcctcctacgccaagggcgccaacggcaacgccgccgagttccagaactatggcggctcattcaaccccggcaccgtcaccttcaaaggctacggcgaagggagcaaccccaatcaccacattggcttcaaggagtatgccgggagcaacaattcattcaaggggtatgccaagtccggcgtcgatttcaaggagtaccacaacacgtcgtcggcagacgcggcgacgacgatgtcattggaggcggtgtcgtccggccaccagcatttgaagtggtcgccggagccagggaagttctttagggagacggagctggtgtccgggaacacaatgccgatgcctgacatcaaggacaagatgccacccagggcattcctaccaagggacattgccaagaagataccattcaagccgaatgcggtgtcggaggtgttcggggtgccgttggacactgcaatggggaaggcggtcacgtccacggtggctgagtgcgagcgagcgccgagccggggtgagaccaagcggtgtgcaacctcagctgaggacattgtggactttgccgtggagatgctaggcaatgacattgttgtgcgcagcacggcctccacggctggaagtggcgggcaaatcaggctcggcaatgttaccggtgttgatggtggcaaggtgacccggtccgtatcgtgtcaccagagcttgttcccgtatctggtgtactactgccactcggtgccgaaggtgcgggtgtatgaggccgatatcatggctgccgactccgatcagaagatcaatcatggggtggcaatttgtcacctcgatacttctgattggagcccaacccatggagcgttcatcgcgcttggtggaaaacccggtgaggttgaggtttgtcactggatcttcgagggtgacatgacatggacagtcgcggattaatgcgatcaaaaccatcttattaaccggtcaatcttcctcttgccaaactaagaagagttctttttcctatgcttgatttttcttcttttgcaaccataagggtttaagaattgtgcaatgtgtgtaggagaaaagtgctggttcatcaccaaatgtaaacagtatatcccggaaatttgggggagttgtgcgtaatttgattgtcttgatcaaattgcattcgttgtggtaaaacaagagtggttcaaaagtttggtcaaatttcctacttaaagtgctgtgctggcagtaggttgtgtcattgtccaagctatgtagcacatcagatgcaaatagtttacatcatggtctcaaaaaagagtaactataaagtgtcaacttgtaactgaagctacatggtttggatttgggtggcttttgcatggaccatcctccaatgttccaatgatcaaaaggaacagaaagtgaaaaaataaaaataaaaacagtgatagcaccagttcttttttttttcttcctcccctgtgaagctgaaaaaaaaggagtggtactggattcttagtcagattgacatatctaaaggaatgtaatcccctagtgatccaatcc</dnaseqindica> |
| External Link(s) |
