Os08g0381000

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Revision as of 12:59, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0381000| Description = Conserved hypothetical protein| Version = NM_001068228.1 GI:115476193 GeneID:4345441| Length = 9611 bp| Definition ...")
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Gene Name

Os08g0381000

Description

Conserved hypothetical protein

Version

NM_001068228.1 GI:115476193 GeneID:4345441

Length

9611 bp

Definition

Oryza sativa Japonica Group Os08g0381000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:18043657..18053267

Sequence Coding Region

18043812..18044029,18051799..18052945

Expression

GEO Profiles:Os08g0381000

Genome Context

<gbrowseImage1> name=NC_008401:18043657..18053267 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:18043657..18053267 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>aacggaatcccctcgctccgttatatcgttttagccccctcccgcgatctcccgtggtccctagccacctccccgccgtcgtcccctctctcccgtgccgccggccgtctccagccgcctctgtctccttgcctgtgcgtcggctggccgcgccaccacctctctcggcctcgcagccgcctcctctcccacggcctgccctccgtttcgcgcggtgaccgccggaggctcgttcccgccgtcgcccttctctttcccccgcgctggccgcctccagccgcctttcccgcctcgcccgtgcgccgtccggctgtgccgtcgcctccctcggctctgcaacaccgtccccttcaccggcctcaccgtctcctcgccggaaactcgccggaacggtgcccccgccggcaaccagtggcattggtgccactgtactccctccagccggctgctgttcgtcgccggtgcgccgatcgacgccgccgtctcctccttcgacaccgcggcatcgtctccttccccggcgtcacctcctcctcgcccgaagctcgccggagtggcctcctcgtcggcgtccagtacctcccggtctccggtcggctcctgtacgtcgccggtgcgccgatcgacgtcgccatctcctccgtcgacgtcgcagcgttgtcctcacctccagctgctcctctgtttcgccggaacgccgtcgcccgtgccggcctccatcctcatcgtcgccgacgtcccttcggccgccccgttcatcctcgccggctcgtcgtctcgcggtgccgcctccgtcatcggatttgcagcggcgcgttccacgtcgtccccgtctccgtgcagctgccgccggctgccctcgtcgtctcctcgccggccccggtcgtcgtcgtcgtcctcatcgtcgtggcgttcgtccctccgtcgagccgttctcgtccgtcgtccgcgttcgtcaagtgtgccgctgcagccccgtcgtcgtcttcgtcctcagctccgcgtcgtcaagcctcgtgccggccgcgtctcgccttcgtccaaggatcgccgccgaagccgtcccctcgccgttcgtctccgttgtgcccatctgtctccgccgcgcccgttcgtcgttgtcgttcccacgcctcgtcgcgtggtgaagttgtttctctccccgacctactccaggccgagcgaagggaaatcaacctcaggagggcgataccaagcagaagaccgttattcgcttcaaccagcaatcagaaggaagcttctcctgtgaatgatagcaatatgcagtcctatcacatcatcacagaaccaatcaaggatgatgcagtcactagaacaatgccagctatatctctccagaactag</cdnaseq>

Protein Sequence

<aaseq>NGIPSLRYIVLAPSRDLPWSLATSPPSSPLSRAAGRLQPPLSPC LCVGWPRHHLSRPRSRLLSHGLPSVSRGDRRRLVPAVALLFPPRWPPPAAFPASPVRR PAVPSPPSALQHRPLHRPHRLLAGNSPERCPRRQPVALVPLYSLQPAAVRRRCADRRR RLLLRHRGIVSFPGVTSSSPEARRSGLLVGVQYLPVSGRLLYVAGAPIDVAISSVDVA ALSSPPAAPLFRRNAVARAGLHPHRRRRPFGRPVHPRRLVVSRCRLRHRICSGAFHVV PVSVQLPPAALVVSSPAPVVVVVLIVVAFVPPSSRSRPSSAFVKCAAAAPSSSSSSAP RRQASCRPRLAFVQGSPPKPSPRRSSPLCPSVSAAPVRRCRSHASSRGEVVSLPDLLQ AERREINLRRAIPSRRPLFASTSNQKEASPVNDSNMQSYHIITEPIKDDAVTRTMPAI SLQN</aaseq>

Gene Sequence

<dnaseqindica>9239..9456#323..1469#tgccgcgcgctgaccgcgcgccgcgcgtgggtcccaccgcccggtcgtcgtcctcctcccgcccagcttctctctctctcccgtgaaccctagtttcttcctccctcaaatccgcgcaaatcaattcccttatttccaaattaagtgggggcttttaatcccctttccatcctctttgatttcccccattttcccccttgattcgtgccctctaacgcccggaacggccgcgtcttctccggccaccttccatggccgccggccgtgtttcccgtcgccgttccgcccactcccgtgcccggctccctcccccatcctataaaacggaatcccctcgctccgttatatcgttttagccccctcccgcgatctcccgtggtccctagccacctccccgccgtcgtcccctctctcccgtgccgccggccgtctccagccgcctctgtctccttgcctgtgcgtcggctggccgcgccaccacctctctcggcctcgcagccgcctcctctcccacggcctgccctccgtttcgcgcggtgaccgccggaggctcgttcccgccgtcgcccttctctttcccccgcgctggccgcctccagccgcctttcccgcctcgcccgtgcgccgtccggctgtgccgtcgcctccctcggctctgcaacaccgtccccttcaccggcctcaccgtctcctcgccggaaactcgccggaacggtgcccccgccggcaaccagtggcattggtgccactgtactccctccagccggctgctgttcgtcgccggtgcgccgatcgacgccgccgtctcctccttcgacaccgcggcatcgtctccttccccggcgtcacctcctcctcgcccgaagctcgccggagtggcctcctcgtcggcgtccagtacctcccggtctccggtcggctcctgtacgtcgccggtgcgccgatcgacgtcgccatctcctccgtcgacgtcgcagcgttgtcctcacctccagctgctcctctgtttcgccggaacgccgtcgcccgtgccggcctccatcctcatcgtcgccgacgtcccttcggccgccccgttcatcctcgccggctcgtcgtctcgcggtgccgcctccgtcatcggatttgcagcggcgcgttccacgtcgtccccgtctccgtgcagctgccgccggctgccctcgtcgtctcctcgccggccccggtcgtcgtcgtcgtcctcatcgtcgtggcgttcgtccctccgtcgagccgttctcgtccgtcgtccgcgttcgtcaagtgtgccgctgcagccccgtcgtcgtcttcgtcctcagctccgcgtcgtcaagcctcgtgccggccgcgtctcgccttcgtccaaggatcgccgccgaagccgtcccctcgccgttcgtctccgttgtgcccatctgtctccgccgcgcccgttcgtcgttgtcgttcccacgcctcgtcgcgtggtggtaaggatctctcctctcgctgccccgtcctcgttctttcggtgtcgccccgtacccgttgtgcggttgtcgaccccggtacccgtgtaccggtgtcggtagtcgttcgcttgtgcgtgtggtgaccgtgttagtgtgcccgctcggtagccgcgtggtttccacgtgtgcagctcgcgtggtgtctagtggagttcgtttgtcggccactcgcctcggttgacagacggggtccacttctgtcgacccgtggaccgtctctgtgtactcggtctacggtggtcccttaggttgacatgtggagtgcgcatgtcaacggcgcagccttcctgtcttttccaggctagcgcttacacatgttttatagttgcaaagcttaattataataatccgcaaatctccatataacagcattaaacttcggatgatcatatcttggtcatacgaactctgaatcgacccgttcaagtctcctaatgtttgttataacctaaagaaccctgtgctttctttttatgtattgttattgcttctttttaggcttgtagctttgcttgtgtgcttcgcgtagcttctgtcgttccggaggttcccgaagcgtggttcgcggccgtcgccgaaggttcggaaggccgttctctctgagcaaggcaagtcacatcatccttgagcatattgaatcccagtttataaaattattttgatttaaattaatgcattatcgctttatttaaattcccgcgttatcactgttttatttagccatgcctatttacctttgttatgaccttattattattgctattgttattattaccttgttcaccctaggataaacaaaaccccaactagtgggtactctattcatggttccactagtatgaatttaggtagatgcttcgctgattaataggacaacattaggtggtttttataacttagactttgggaattttcatatcacttggatgctatggaatggatggcttttgttggaattggacacacacctccccctctattcaaaacccccaaaaatggttttaggctgggctcgaggtgcgtggttgggtttggttagtcgtacctcgggtactataaggattaagctcgggcctctgttgcaaagcactaccgtacttccacatgtctagtgggtaaggcttagtttgtggctcagtctggttataaacaaaagtacacggatggagatggacgaagtcgggggtcgatggacatctctaggacaaatgaaggctacacgagctgcggcccggtagtcgagatgtcatggcacagggccggtgtcctgctgctgggggctcagtcctgcctacctgtcccgggggttccggccgtaggtggggttgggtcggtactcttgtttatggctaggatgggttgggaactatgtcacgtcttccgtccgtataccgtggtggtatgtggcacgtggttacacgtgaggaagatgtgtcttgtgggtaaagatgtacacctctgatcagagtataatctattcgaatagtcgcgccctcggttatgggcaagccgagcaatgtacccaagttagtgttttaattcttaaaatttgcttaacaactaaaatgtggaatggttggcctgggttggcttgggacgagctgggaccaagggtcgggttgctagttcggtctgaatcatcgtaggccttgggttaaggcaggttcgtgagggttcacggccttgattaataatactgtgtaactctaggatcgtctttataaaatggctttgggcaactaagtgacttttaaatgctgttttctgcaaaacttaacccctatattattaccccttgtacccccttgcattaatcatgcatctgccggtgtggctcgctgagtactgtggttgtactcattcttgctcaatcttttccccccttcagtaagagaagcttcggagaagatgtcttaggtggagtcctggcttatatcccagttgagcgcctgtgaagatggagccgtaggcccgcttttccgctgctgtttatttttgtttatcaggcctgaagcgcctttgtaataatgtatatattatcgatataataaagatgtgccttttgtatcatgtttgtttggtgtaccccggcttttcctgggacggggattaatacactagcgttcgggaaaaggtatttttctcggtcgcgacaagctggtatcagagccatctcgactgtaggataagccaagtggataaaacctaaggacatattttataaataaaactatttgcgaaagttccttttttctccttcccctaatgctatttgcaaaaggtttactccgttcttccttcttcggattttcaactagtactagatggtcagctttgcgaagaagaagatgtcgccaattgtttgccgaagctccggaagactgcaggatccgcttgagaagtgctggaagcagtgaagccagctgtgaaggagtgaagatcttagagaacccgtcgcagaacccaagccaccctctagggtagagtcgtttgtcgtgtgtttccttgcttgtgtgtgtagcgcgtggtttgcatcagtgggttgtgatgtaaccatgctaggttgtttgcttaatcaacttgcagaataagcaaaacaaacaacacatcaacaaaaagagttagttcctttaaggtcttgtccctagttttggtctattctttcctgacttgtttcctctctcacctcaatccctgtcacagatgtttaacagagaaaaaggaagtaactcaagttttcaactcaatccaccactggcctcaagagagttagcaagggcacacccttggtccattccaagcatgctgcttagttcacagctaccattggttggaagtcaagaccaaaatcagtatgtgtttgatcgaccatttgccacccaggtcaatgagcttccaatgccagaagagcatgtccccttttgtcatgattgtagagagcaaggacactatgccctgaattgtccatgggtatatgccaaagaagccccttcctttggtttagcagggcagtgtagacccccgattttggaaatcggaaatcttctgtgtttatccgtaccaatccctggatcagtagttggtacacacatacatagttggatcacaacatatcacgaatgaatttaggctaaaagagttaaatacttacattagggccaggtaggccaacaactatcagagaacaacagcggaagacaaaataatataagggcccggttaacatgccacaggcagtcgactggggaacgagacctagaacaagaccgcactccgatcatcttgtgggatacgcaagcgtaccgacaagggcttctcttcaacactctcctaaaagatatataaatagcaagggtgagtaccaaccgtactcagcaagccaccacaacaacaatgcatatgatagcgggtatttcaaggaatggcttcaggttcttttgcataaagctaattttacaattcttttcacaagcctaaaacctagcatagactgatcaaattttagtaccagtgttcactttaaacaacgacggttctgtccaccatccattgtgatcccaaggatagcttcccgccattgaatcgtcatggttttctgaggatgtccaccttccctcctctcgggatgtggctccatcagcataaaattcatcatgcaatatcccatcccacacaagttaagaatttagagtctagccaagtgtaatacatgtcccggtgctcaataaccgcgagcacggctattcgaatagatttggtttactcacactgcagtggatgtacactttacccgcactccgcgactacccaacacatgagcctcgtcccaacacatgagacgcgtcacggcaaagcttttcgataacctcgcattggcagtacccgctccatgaacttttcatcctcatgcactctaggcgtacacggtttctagcagtgagaggagttctggcgcacccgggaagggaagactcacacatgcattaagttatagttatgttttagattctctcatggcagtcctaccgatggcgacaccactgtagacacccgcctcgcggtcctaccaatggctgccccaccgtagagcccctgcctcacacatcaagaaaccactatgcatggatactgcctccgctcagctatctactccgctaggtctatacccatacgagaagtgcggttgtacgggggtcgtttcatgcttaacttcatggctcggtccttaattgaccagggacggcactagcattttccggacaccacccaagtcctccagccgccccagtcgaaaacagttgttttacttttttttcctttcacaaatcatgtcatcaatatcatggcaatgtggcgctcatgtctccacatgccgcatctcaattaccttcccaaaggtaattgcccaagcatatagcatttgataaatatgagtatgcatgattctagaatagcctttctaagcaattgtcatagttgactagggactcatacgtaaacatggttacaaagatttaagggtaaacaataatcaaggcatggcataatcacaagtaggatgttcatcattgcatgcaattttatttataaacaaaacaatttcgcaattgggatcaacatgctcaaggaatagtgatgacttgcctgctcaggataatccctattctcgatataatcttgatcaaccttcacctcctggaagttgcagacgttgcctcacgactaaccgatacacaaagtctataatacgcgagaaaaaccaatattcaagcaacaatcaaatatgcacaaacaaaatatatttgctgagatcgaacctagggttgctcatattattcgcgcttgctaatggactctaatcaagctaagagctaaggtttcttagtctttctgttgtcatggtggttcagtctagctaatggctaaggaaggattatggttacacatgcatctatctaaatagaacggttatacactagaggttctgttgccggatggattttggatcggtcaaataattactgtgaatcatttgtattattattttattaatggaggctttaatttaattatgtacatatttcacttgtcaaaataaattataaaaggttaacaattacccatgctgtgtatgttagaattgtttaggttaatcatattatggttacggattatcccatcacataattttacaatgaataatccaaatttacagttgatctgtaattatacgaggacaagatgtataactagtatttatctaatattcatgttcgtcacatactccctctaaattaatatatgcaacaagcaaattaatacgataccatatatctataatgggatgtacaatatatgtgtgcacaatatcttaatatattgaatcatttatttgaatagtttctatttactgcttggttaactaagggttgctcacctctcccactatatgctattatatgggatatgtcgttgattaatttcatataggtgatttaatcacactagctctgttattatttgccataaacaagcttaggaccgatctatgtgtatctatattttacttacctaataattataaggctaactctatttaaataactaataagtcgtgggttttaattatatttggacatagattaataaatggcactaatattttcctatatatccattaacttcaaacatcgattatacttaatttatgtggttgctacagtgacagaacatattaaagataattattctgctgtacaatactaagcatatttttaagttgactattatgcatcatcttgatattaattatttaatttttataaatatattttatccaatagtgaattatatatcattggaaagcttatgaaattagatgaatttaggttcaagtttcactcaaatcggagctgaaatgaataagttatgctagcgtaaagattcaaatttgaattaattctaataattgcgaaatggtactgtccctaattcatttatttataatacaaccttatccacaagctacagtgaccgacaggtggagtcaagctctttattttcttttcattaactttactatctgcgaactacggcaaacccaatttcgatttaaactattttgcgggtataattattttgttgtcataagtttttaatttactcttcccgagcattatatccatataataggttagaaatttctattacgagctaaatatcggacgaaatcctagaaatattatacaatttaatttagtctatgactaaacgatataatacacggctaagattcctagtaattaaatctgaatttctaccgtgaaccgatgacttagagagattaccaaaaataatctataataatctaaaagaattcatctaattgtttagttattaattatatctaatttactaccaattttaatctaatctgatcaagacacatattcttataattaactcggaatttcgaccgaaatactattacgctcgaggaattttcaaaaataatctatgattaaccccgaccatttttatttcctaaatcctcctaatttcttatttatttccttttcctttttctcctttttccctttttttttctttcctctctttttcttttctttttctctctctcctctcttttcccttttcttttctttctctcctctctctctttttccctttcttctctccctcccggctcctttctcttcttcctcggcttctccctcgggcggcgacggcggtgggcgcgaggtggaggggggggggaaagacggctcaccggcggcggcggtggcggcgacggcggcgacggcggcgcaggacgcggcgcggcacccggtgcggtgcgacgtcaccgtggtcggcggcgcggcggcaacgatggcgacggcggcgcaagtcgcggcgcggcgcggtgactttgtggcggcggcacggcggcacgacgacggcggcgcgtggagaaggggaaagagggagaggagaaaggaatggagtgggaaataatggagaggggtgggggtgtttatagggaagaggggaagaacgagaggggaggggcggcgacgcgacggtggtgacccgatgggtggcgacgtgatggcggcgcggggctcggggcggcgcggggctcggcgcgcggtggcaggcggcgatgggacgggcggcagcggtgacacgacgggcgcgcggcgcggcgacgggatggtcacgcggcgatgggatgggcgggcggcgcggcgcgggacggcgacgcgcggtgacggcgatgcgacggatggtgcggcaacggaacgggcgcgcggcggcaggcgggcgcgcggcgcggcaacagcgtggcagcggcggcgcggggcgcgaaccagcggcacggggctcgaggccgacggcgacgatggcgacggcggcgcggcgggcgagcggcgcgaggcagcgacggcggtgcggtggcacggggctcggggcggccgggcgcgcggcgcgcggcgacgggacagagggggctgggctaggggaccacatcaaacacctagaggctaatgaatagtgtatttttctaattctcccgattttagattatttgctatatgaatttgattctatagtttctaaatcttgcataaatgaagtttactcaatatgtgtattatctcaactaatgaattcaccctagattaatattactcatattttatttttattgtcgtcgatggaagaagttgtttctctccccgacctactccaggccgagcgaagggaaatcaacctcaggagggcgataccaagcagaagaccgttattcgcttcaaccagcaatcagaaggaagcttctcctgtgaatgatagcaatatgcagtcctatcacatcatcacagaaccaatcaaggatgatgcagtcactagaacaatgccagctatatctctccagaactagaatgagtagccatgtttgtgattttcagttcgctacttatcactgtaaccgggagtttcagcagtcatgtaataaataaatatattcatgattataaacaatgagtttgttatgtttatggatgaatcatgtcgaggatacaatgtaccgatgct</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0381000, RefSeq:Os08g0381000