Os08g0383700

From RiceWiki
Revision as of 12:59, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0383700| Description = Repressor protein| Version = NM_001068233.1 GI:115476203 GeneID:4345446| Length = 4006 bp| Definition = Oryza sativ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os08g0383700

Description

Repressor protein

Version

NM_001068233.1 GI:115476203 GeneID:4345446

Length

4006 bp

Definition

Oryza sativa Japonica Group Os08g0383700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:18175925..18179930

Sequence Coding Region

18175953..18176007,18177043..18177132,18177726..18177820,18178905..18178973,18179059..18179640

Expression

GEO Profiles:Os08g0383700

Genome Context

<gbrowseImage1> name=NC_008401:18175925..18179930 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:18175925..18179930 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggatccgatggatatcgtggggaagtccaaggaggacgtctccctccccaaatcaacaatgtttaagattataaaggagatgttgccccctgatgttcgagtggcaagagatgcacaagatcttcttgtggaatgctgtgtagagttcatcaacctcctatcttctgaatccaatgaagtttgcagccgagaggacaagaaaactattgctcctgagcatgttcttagagctctgcaggatcttggctttagggagtacattgaagaggttcaagcggcctacgaacaccataagcatgataccctggattctccaaaagcaagcaaattcactggtgtggagatgacagaggaacaagctgtagctgagcaacagaggatgtttgctgaggcccgagcaaggatgaacaatggtgccgccaaaccgaaggagccagaacctgaagcgcagcaacaaacacaacagccaccacagcctcagctgcaccctcaaccacagcaacccctgcagcctcaacttcagctccatcctcaaccacaacaacagccctcacagctacatcctcaacagctgctgcatcctcaatcgcagcaaactccgcagcctcaacctcaggtccaccctcaaccacagcagcctccacagctgcaaccgcaacctcagcttctccagcaaccgcagctgccccaacagctgcagccgcaatctcagctccccccacaaccgcagcagcccccacagctgcagctgcaatctcagctccacccacaaccgcagcagcccccacagctgcagccgcaacctcagctccatcagcaaccgcagccgcaggcagagctgcaatcacagtcacaaccacaaacagaacatggcttggacagttcatga</cdnaseq>

Protein Sequence

<aaseq>MDPMDIVGKSKEDVSLPKSTMFKIIKEMLPPDVRVARDAQDLLV ECCVEFINLLSSESNEVCSREDKKTIAPEHVLRALQDLGFREYIEEVQAAYEHHKHDT LDSPKASKFTGVEMTEEQAVAEQQRMFAEARARMNNGAAKPKEPEPEAQQQTQQPPQP QLHPQPQQPLQPQLQLHPQPQQQPSQLHPQQLLHPQSQQTPQPQPQVHPQPQQPPQLQ PQPQLLQQPQLPQQLQPQSQLPPQPQQPPQLQLQSQLHPQPQQPPQLQPQPQLHQQPQ PQAELQSQSQPQTEHGLDSS</aaseq>

Gene Sequence

<dnaseqindica>29..83#1119..1208#1802..1896#2981..3049#3135..3716#gttaggtgtcgcgcctggagacgcggagatggatccgatggatatcgtggggaagtccaaggaggacgtctccctccccaaatgtgagctgaactcccttgattctgattatgcgtttttttttcatgctttctcttcgtgcctagaaattttgatgcaattgtgcttgtctgcgaccgggccatggttaatctgcgaattatctggttagggtaatttaatttaatttaatttgcgtcagttctatttctttttagagttgatactcccgtcaggttacattatgtgtgttgtctcaggcaggcgacttgttgagacaagaatttagggtttcttttttttttgtatgtgattttatttacatgctcttacagagggagggagggggtgttctgctgtgctaatccgttgttagggaggttgaattcacttttggtgaatagattctgtatgcctaggttgtgtgaatttgtggtaaatgtggacttgaagattgcgctgattattttaggggttttcttatttgatgcatagtgagattgtatgtgatcggtccatgtttcagatattatcgatgacagcagacatggaatagaatgttaactttcatggaaaatctagattgtgctgcttatttcttaggagtatgttgcttgaagttggcactacatttgtcgggttctgataatctgattggtgttgtaaatatggtactccttttgtgtacattgatttcatgctccaagttgacgatttgtttcttttgtggttatagcacatagccacatacctttccttgagtagttgtttccttcagatcgaaaattaatgcatttcaattataaaccttgtgataaatggtctttgatgcttactatgaagtccagtaatgtttactgctttgacgtttgacagcacagcgcagctgttttagcgaattataattgtgatccataaatatttctctgggcctgatgtagtatttctagctatgaatttggacaactgtgaatcgaaattcatagccaaaagttgctttattttagggcggaggtagtagcatttttctgtaataaattgtagctgatttaagttagccgttttctgttacatttcagcaacaatgtttaagattataaaggagatgttgccccctgatgttcgagtggcaagagatgcacaagatcttcttgtggaatgctgtgtaggtaagagaagttggtactatttttaatcaagaatatgaacagtgtatttttaatcttacaaagttatccgttttaaaaacagtctggtggaccattgtgacgttattatctggtaaaatttagtcaaatctgactggatgtatttacaattctaagttttctatgtttaatcattaatgtaaaagagaattaagggtatttacgattttaagtgttctatgtttagtcaagtctgactggatgtatttacgattctaatgcaaaatctattgtggcccgtaaaaaaaatggtagggtcgatatctgatttgtgtatagtattgttaatcacataccgtattttcctgcctggagcataaaatccatactctcaccaaatttattcatgttataatccctccatgttgtgagttccttaaacattaaaataagttattccccaaacagtttggatattttcttggatgtctcttgcaagatgtctcttgcaactttcaaccttatttcaacctaagggatattggttgtaaaaaatagctgaaatttctccctttctggatctaatcacaatatgcatattttttatatatcagagttcatcaacctcctatcttctgaatccaatgaagtttgcagccgagaggacaagaaaactattgctcctgagcatgttcttagagctctgcaggtttgcctttcatttcctgaatattaacattattttttatcacttatgatgctgtcctacctgttttatcatggtcgtagttttgtagtatattgtcaatattttttccttatgattatggaccttatctatattgtttcagtatactgcaaaataaagataaaaataacagaatgcctggaacagagtaaaaggggaatatatgaatgtttcttttttgaaaatgaaggatttgagtatcttagagctctttttctgagtgcaaattggttatgactattgactaaagtctgaaactaaaatgctgaatttgtctgatggcagttcagatatctatatgccatggaatgctattactacacagctaaaactgatctgcacatatgtgttcatttgttaacatgattttagggggctgaaagtagaattgggcttggactacccaattgagtgtggtcttaaactcgtactccattttgggccctggtggacttttttcggttagatcatggatatgtattgaacaaggtccaatggaaacatttcaatggaaacatttcaatagtaaaatacttcttgggcaggagttgagcctcaacatttgatgtccaatgttaaaacacaccatgaagttcagaagttgttgacagccacattcactcggcgataaccacatgatggaaatttttatggtggatgttgttgcctcatcgcattgcaatgctaagcagtggcttagcattggctacggttcataggacctcaacattctccttgctcccttgtcttccttcatggagtgttgtgctttcttcctgggagatgtacttttgcttctacatgattcaaacatcaagtcttgaaaagctcgaattttttttttttgtaaatgaaaaaatatgtatagaaccagctgagaaccttgttttaaccaaacactcaggctccaggttccggaaccctgcagtgtaaacctatttctggctgatctacctttgaaataattgttttccaactagtagttggtactcgccaatatgtgaaatctccagacttatttcagttttttttttcattttggcaggatcttggctttagggagtacattgaagaggttcaagcggcctacgaacaccataagcatgataccctggtttgtactatttttttcccacagagatatgcatagtatccatcatctatgcaggatacattgacactattttttcatcgagcaggattctccaaaagcaagcaaattcactggtgtggagatgacagaggaacaagctgtagctgagcaacagaggatgtttgctgaggcccgagcaaggatgaacaatggtgccgccaaaccgaaggagccagaacctgaagcgcagcaacaaacacaacagccaccacagcctcagctgcaccctcaaccacagcaacccctgcagcctcaacttcagctccatcctcaaccacaacaacagccctcacagctacatcctcaacagctgctgcatcctcaatcgcagcaaactccgcagcctcaacctcaggtccaccctcaaccacagcagcctccacagctgcaaccgcaacctcagcttctccagcaaccgcagctgccccaacagctgcagccgcaatctcagctccccccacaaccgcagcagcccccacagctgcagctgcaatctcagctccacccacaaccgcagcagcccccacagctgcagccgcaacctcagctccatcagcaaccgcagccgcaggcagagctgcaatcacagtcacaaccacaaacagaacatggcttggacagttcatgattcagattccatgttgtgtagcctcagtataaggaaaagttggtgtacttccgctggcatttactaggactctgtgtgccccttgatagttttaggtttccatgcttcatgtacaatgtaaatccagtgtgatttcagttaccatgttgctaataatctgaagctctctctagtcactgatgttattacttttccaaacaccctttctctgactctatgactgtagtagtatcatggcatgtatgatgccttgtcaaaagggactccattagcagtgtaacttgactttt</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0383700, RefSeq:Os08g0383700