Os08g0384900

From RiceWiki
Revision as of 12:59, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0384900| Description = RINGv domain containing protein| Version = NM_001068238.1 GI:115476213 GeneID:4345452| Length = 4270 bp| Definition...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os08g0384900

Description

RINGv domain containing protein

Version

NM_001068238.1 GI:115476213 GeneID:4345452

Length

4270 bp

Definition

Oryza sativa Japonica Group Os08g0384900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:18244713..18248982

Sequence Coding Region

18245672..18245876,18246129..18246214,18247049..18247195,18247959..18248082,18248237..18248524
,18248637..18248731

Expression

GEO Profiles:Os08g0384900

Genome Context

<gbrowseImage1> name=NC_008401:18244713..18248982 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:18244713..18248982 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaggatggacaggaatgaggaagagatggtcacgaatgactcggaccctcttctcaagagggaaaacgaggaggcagagtcatcgtcgcagctgacaccgcctaagccagcaaccttgagcgcgctggagattgaggatgaggagaccgacggttcttctgcagggtgctgccgcatttgtctcgagactgattctgagttaggtgatgaactgatatcaccttgcatgtgcaagggaactcaacaatttgttcaccgctcatgccttgaccactggagatctgttaaggaaggatttgcattttcacattgcacaacatgcaaagctcaattccatctccgagtggaaacttgggaggacaattcatggcgtaaaatgaagttccggatatttgttgcaagagatgttatccttgtgtttcttgctgtacaacttactattgctatgattggtgcaatttcttactttctagatagggatggaagtttcagaaacagtttcagtgatggttgggatcgcttcttgtcaaaacatccaataccattctattactgcataggtgttgttgttttctttgtgctactcggattcttcgggttgatactgcattgttcgtccttcaatgataaccaagacccatgcctagctgggtgccggaactgctgctatggttggggcgtcctggactgcctgcctgcttctctggaggcctgctttgccctggtggtggttttcgttgtcgtgttcgccatcctcggtatcgcatacggtttcctcgcggcaactatggctgtccaaagaatctggcagcggcattaccacatcttgaccaaaagagaactcacaaaggagtacgtggtggaagatcttcatggcagctacacgccaccgaagcttgatccagagcatgaggagcggctgaaaatgctgaagctcctctag</cdnaseq>

Protein Sequence

<aaseq>MRMDRNEEEMVTNDSDPLLKRENEEAESSSQLTPPKPATLSALE IEDEETDGSSAGCCRICLETDSELGDELISPCMCKGTQQFVHRSCLDHWRSVKEGFAF SHCTTCKAQFHLRVETWEDNSWRKMKFRIFVARDVILVFLAVQLTIAMIGAISYFLDR DGSFRNSFSDGWDRFLSKHPIPFYYCIGVVVFFVLLGFFGLILHCSSFNDNQDPCLAG CRNCCYGWGVLDCLPASLEACFALVVVFVVVFAILGIAYGFLAATMAVQRIWQRHYHI LTKRELTKEYVVEDLHGSYTPPKLDPEHEERLKMLKLL</aaseq>

Gene Sequence

<dnaseqindica>960..1164#1417..1502#2337..2483#3247..3370#3525..3812#3925..4019#actcgctttctctctctcgcgttgcttcctaccgaaatcttcgaatccatcgtcgtcgagaagagacgaggacgccctccccagtggcggcgagcgccccccccccccacccccacccccgaggaagaagaagaggaggaggaaggttttgcgcgccgttcgcggattcctctccgtcctcacgccccggattcggttcgtcccgcggtcccggtgagttctcctcaatctttttccgtgttccattattcatgttctttggttgtatgtagtggagggtttgcccccacgcatcggctttgaatcctcggagagatgagaggaggggagattttttggtatcatatgcgttgcgacgtggcgagatcggcgttgctctctctctctctctccctccccaggaggcagtttgcctgcccggagttgtgcgggttccttcgctggatttctgggggttgatttgacggtggctatgtttaacctgttcaaaattcaagttgtggagcctcgaattccgacgattttatcgattgggcacttgaatcgtatcatggatgaggatgatgctgccctacggtttcattcaatgtgcattttgggagtagtttcaattagacctcaaatttcgacgtattcgcttcacatttttcatgtgctaagaaccagccgaacttttatgtgcttaatcgtgaaatttctgacttggtccgcgaatgatccacgagaccaagtctggtacagacaaatggagttcgtcgttttcactttgttctaggtgaaattgctagtattcatttgcagcttggttggaaactttgactttaaagctttgctctcttcagaattctttcgctccataagctgattctttgcagctgtttaaacctacaacgtgacttcagaattttgtgttctttggttgatgtagttcttaaattggctgtagattagactgaagaatgaggatggacaggaatgaggaagagatggtcacgaatgactcggaccctcttctcaagagggaaaacgaggaggcagagtcatcgtcgcagctgacaccgcctaagccagcaaccttgagcgcgctggagattgaggatgaggagaccgacggttcttctgcagggtgctgccgcatttgtctcgagactgattctgagttaggtgagtatcctatgtatcagagagtagttttattaatttttctgtgcagttaggttgctttgttttaatatttgggaatgctttttctgtgggaaatatgtctgtgatttcaggagaagggaagtaaggagtggagcttttattttgttgagagtgtgatataaatagacataatgtcaatttggtttttagattgcaataagtacaagtcatgtaattcaaccttctttgttcatgcttaccatgttacaggtgatgaactgatatcaccttgcatgtgcaagggaactcaacaatttgttcaccgctcatgccttgaccactggagatctgttaaggtgctctctaatgtttccgctacatcatcatttcattttgttaagaaatctgatagtaacaacacacataaaagtatgaatttttagcttattattattcacttcaggaatatttataaagcaattacatgatatgcggtgttgctttccatgtccaacactatgtacattggattgataactactaactagcacgttgacatgtccttggaagatgaaggagtgaatcacctagagaacaagcaaaacttgcataaagaagtgactggcttgtcaaagtgttacattacatgaagagtaatgcaattattagaaaggtcctgtgtactatacaaacagctgaaaatgatagtgcagcctacattttactatctttcttgttctggtaggaaatggcagtgctcgtcttatgcagtagaacctggccatttgcttctttaaccattgttttcaaatggcagatctgagatcacaaaggtgccatcggtatcagctttagatatactggccatgattcattaggagtcaaaactgcgtctctccaagctaccatctttcagcttgatttggagggtacagtctagagttttggctgcattcttatatggcactttaaaggctttgatcaatgatcatcactggaaaggatgcaaccttcttttagaatctaggttgaatttgtgcttgatctctaaactacagttattcacactgtgattataatcttgctgagtaaatgtaattttctaggtgtgtttttttctttgcaacatgttttaacctgaatggagaaagaataccaattctgattttctattaatgcttaatttttaggaaggatttgcattttcacattgcacaacatgcaaagctcaattccatctccgagtggaaacttgggaggacaattcatggcgtaaaatgaagttccggatatttgttgcaagagatgttatccttgtgtttcttgctgtacaacttgtaagcattaacactttgacactacttttcatatttgttttcagttccaaaaaccacaagtactttgacaaaactattgcagaattacatatttaagtcatatcccgactgaatcagtaatgaacttatcacaaaactaaagattttagacgttagattcctagcactattgtcgttatggaacttttagaatatgtatttttgctacaaaattgatgttaaatctgtagtattgcattctgtgctatatattgccaccccgaggggatattcccttatttagcattggactgtctatagcagttatatcaattttattaagttcatagtatggcttaaatttatggatttttgatgattgatgttctcattgcagttcttgttgtatgcctaatagacattaacatttggacaaactccttactctgctgcctcctgaggcagccagaattgcatctttccaaatgataagtttggcaatgaaaatccatcacctaagcctgtgatttttgttgttcaatcccaaatttacatgttaaatgctacaaacgtactgtttttaacttttaatacattatatttagtagaataaaaggctgatctgactggtgtttcacttaaccttttctatttgtagtgatatcatttggttatacggatgagctatgtactccaagaaatagcgatgtattttagggtatttagttctgaaattcaagtttaagtaagagaaatagttttattgaccatctctattttgcagactattgctatgattggtgcaatttcttactttctagatagggatggaagtttcagaaacagtttcagtgatggttgggatcgcttcttgtcaaaacatccaataccattctattactgcataggtataccaatcacatccttccttatacctgatgaatcctcgtgttgagatcgatgacatgaacatttgatggatccatggtgtggaatacgtattactttactgagagaatatctcttaatgttacctgtgatgatgatccctttgtattccaggtgttgttgttttctttgtgctactcggattcttcgggttgatactgcattgttcgtccttcaatgataaccaagacccatgcctagctgggtgccggaactgctgctatggttggggcgtcctggactgcctgcctgcttctctggaggcctgctttgccctggtggtggttttcgttgtcgtgttcgccatcctcggtatcgcatacggtttcctcgcggcaactatggctgtccaaagaatctggcagcggcattaccacatcttgaccaaaagagaactcacaaaggcaagaactccctcagaccagtgctcttctaatgacaatgatccagcaaaatgccttaacatttggatattcagaatatctctctaagatgtgcattcattcatatatgcaggagtacgtggtggaagatcttcatggcagctacacgccaccgaagcttgatccagagcatgaggagcggctgaaaatgctgaagctcctctagcctctcatggcaattacagaactactaccgcctgtatatctgctcctcctctttcgcttcagattaacaaacggcaatctgttgtacaccagtgtaaatattgagtacgtgtgccgaaacaaaatgtctcgggtgagtgtttgttgtcaatttaattcgatcgatatgtttaccttgtcgcgtgagtgttcctcgatcatactgctgctggaactacactatgaacaactagtagtaattttatccttgcg</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0384900, RefSeq:Os08g0384900