Os08g0386800

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Revision as of 12:59, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0386800| Description = Mitochondrial substrate carrier family protein| Version = NM_001068245.1 GI:115476227 GeneID:4345459| Length = 5512 ...")
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Gene Name

Os08g0386800

Description

Mitochondrial substrate carrier family protein

Version

NM_001068245.1 GI:115476227 GeneID:4345459

Length

5512 bp

Definition

Oryza sativa Japonica Group Os08g0386800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:18340003..18345514

Sequence Coding Region

18340180..18340464,18340556..18340630,18341750..18341878,18341973..18342032,18342518..18342688
,18342843..18342936,18343107..18343198,18343318..18343467,18343654..18343712
,18344982..18345111

Expression

GEO Profiles:Os08g0386800

Genome Context

<gbrowseImage1> name=NC_008401:18340003..18345514 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:18340003..18345514 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggtgggctgttccagagggggcgggggcctccccgcctggatgaccgccgccgccgcccgcgtcgatctctccagcgccggcggaggcggcggcatacccggctcgggggcctcctcctcctcctcctcctcctcacagcccggatactcggggccgcatcagcaggctggggttgcgggggcggccgccgaccaggagctcgggatggccgagcgcgcgctctccgccgccggcgccgcgttcgtctccgccatcatcgtcaaccctctcgacgtcgccaagacgagattgcaggcgcaggcggcgggggtgccctactaccagccgtcgcagatggcgtcgctcggcccggacgcgatattatctgatttcagatgttcgccgtcatgcacacgtggtgtcattttgggaagtgagcctatttgcccacctgactgctttcagtacaagggaacacttgatgtattcttgaaagttgttagacaggaaggatttggtagattatggagaggtacaaatgcaggcttggcgttagcagtaccaactgttggaatatatttgccttgctatgacctatttcgcaactggattgaagattttacacaaagtaatgctcctggtttgacaccatatgccccattagtagcaggatcagtcgcacgttctttggcttgcattgcttgttccccaattgagttggcaaggacacggatgcaggcatataaagaatttcgtcctggagtaaagcctcctggaatgtggaaaacattgcttggcgttgtttcaccacttgcaagctcaactcagaatgcacaaaattatcgtgctctttggacgggtgtgggtgcacaacttgctcgggatgttcctttctctgctatatgctggtcaacactggagccgattcgaagaaagctgcttggtatcgtcggagaagaaggtgatgcagctagtgtgctgggtgcaaactttgcagctggctttgtagcaggtagtcttgctgctggtgctacatgccctctagatgttgctaagacaaggagacaaatagagaaggatacgcaaaaggcaatgagaatgaccacaaggcaaacattagctgatatttggagctctggaggtatgaaaggcttgttcaccggtgttggtccacgtgtagcacgagctggcccatcagttggaatcgtcatttctttctacgaggttgtgaagtatgctcttcatcaaaggcacatatcatga</cdnaseq>

Protein Sequence

<aaseq>MVGCSRGGGGLPAWMTAAAARVDLSSAGGGGGIPGSGASSSSSS SSQPGYSGPHQQAGVAGAAADQELGMAERALSAAGAAFVSAIIVNPLDVAKTRLQAQA AGVPYYQPSQMASLGPDAILSDFRCSPSCTRGVILGSEPICPPDCFQYKGTLDVFLKV VRQEGFGRLWRGTNAGLALAVPTVGIYLPCYDLFRNWIEDFTQSNAPGLTPYAPLVAG SVARSLACIACSPIELARTRMQAYKEFRPGVKPPGMWKTLLGVVSPLASSTQNAQNYR ALWTGVGAQLARDVPFSAICWSTLEPIRRKLLGIVGEEGDAASVLGANFAAGFVAGSL AAGATCPLDVAKTRRQIEKDTQKAMRMTTRQTLADIWSSGGMKGLFTGVGPRVARAGP SVGIVISFYEVVKYALHQRHIS</aaseq>

Gene Sequence

<dnaseqindica>178..462#554..628#1748..1876#1971..2030#2516..2686#2841..2934#3105..3196#3316..3465#3652..3710#4980..5109#agaaaagagacaccctttctctctccacctctccctctctctcctctcttcgaggagtctccctctcctctcctctccttctagagagagagagagaggcgcagccgccgccgccgctcgcaaagcgccacgtcccccgatcgagccggctagggttccgccaccgccgccgcagccatggtgggctgttccagagggggcgggggcctccccgcctggatgaccgccgccgccgcccgcgtcgatctctccagcgccggcggaggcggcggcatacccggctcgggggcctcctcctcctcctcctcctcctcacagcccggatactcggggccgcatcagcaggctggggttgcgggggcggccgccgaccaggagctcgggatggccgagcgcgcgctctccgccgccggcgccgcgttcgtctccgccatcatcgtcaaccctctcgacgtcgccaaggtcggggtcggggggctttcgcttccgccgcgtgcacttgtgtgattggtggctgaaagtttttttgtgttttttttttcgtttgctgcagacgagattgcaggcgcaggcggcgggggtgccctactaccagccgtcgcagatggcgtcgctcggcccggacgcggtaacgaatctgatgatctcgatgcgggtgccgtgtgggtggtttgcaatttagttgtagttagcctccgatttcatgtggtgtgggggattcttgctttttgggttttcgtgatttcaggctagtacatgatgtttgttgtgtgcttctacagttgaccagggtgatactgtgtggaatgcagttagtgtttctgtttgttttgccatctaattattaatattacccaagctgaatgttgaggttcattagttgaatgcaggggcatgctaatctgcttgttgacccagaatacccagaattatatatggtttagtaccttgttttgttgatttgcatcgtcctctagaggagcaagtagtcatattgcttgatttctgtgacgggcaatctcttctctagcccgaatcagtccacgagtttgatttcttttttttctgtcattcaataaccatttgaagatgagtcctttatagctcatgggtgcctgtgcaacgtggggtatagggtgcatgatgttaattacattcgtaacatcgttatgctagaggatgcttgggtactcaattagtcacctgcactgtatgttggtgaggaagttgtgattattttagcatgtttaaggactgtgtttcagtactaaacttggccacacactactgtggtcaacaccattttgtttaaagctttaggcaaataatgttgatgaatggtatcagctatggcaaagattaattgttctgatcacctatgttgatcttcttttcgtacatgctatcttcatttctgtagtgctacttgctgttttgtttgatgttggcatatgaagtattttcctgcttatattatgcctctcaaagcaagattgcttttgtgtctgctatatttacctatggagaaagtatttatgtaagatttgttggaacaccattttccagatccacaattctcatgtttgtttgtcactttgttttattttatcatatgcctattcttgttttgatctgtttttgctgatcaacaatctcattgcttttatgctaattgtagaagatcttattggtcttaactcttgagcttatttgaagaatactgcttatgtcttgcaatgctttccagatattatctgatttcagatgttcgccgtcatgcacacgtggtgtcattttgggaagtgagcctatttgcccacctgactgctttcagtacaagggaacacttgatgtattcttgaaagttgttagacaggtaatgtgactttaattcctttttatagttttatgcaagtatcgatttctagagcacagagaatttaacacttttggttaattggttgttacaggaaggatttggtagattatggagaggtacaaatgcaggcttggcgttagcagtaccaactgtgagttttttttctcaatgtattccatttttgtttatgttgtatttgacaaatgttctatgatgtatttttacatgtgactagcatctgttgattagttctggtctttgtggcaaatactatgtgaaataggcattgcctgcacttctctatgtcatttggactttactagtatagtgcgttccacatatttctgcttaggtttgttgtcttatattaatctacctaaaaaactcaagccactagcttatatgaccatctttttcccctgaataaggtataccatgccatttctgaattgggccttaatctttagacatatcaacctgctaaaattagatatatcacctaatactccagtctgcacatgaatctgacgttatttcttcatgttttctttttcacaccctaattttgcctgtcatgtgaccctttaatgtttgaactgaatcttgtcttttactaatgagtttgaccataaacaggttggaatatatttgccttgctatgacctatttcgcaactggattgaagattttacacaaagtaatgctcctggtttgacaccatatgccccattagtagcaggatcagtcgcacgttctttggcttgcattgcttgttccccaattgagttggcaaggacacggatgcaggtatatctccattggaagtttctggttattagtatttgtgtttctgtgaaaccaattatgtctataatttttatttttgggcatacaatttgacaaatgtaataatttctttctcacttaaaagcacctaacaatcactattctatgttcacaggcatataaagaatttcgtcctggagtaaagcctcctggaatgtggaaaacattgcttggcgttgtttcaccacttgcaagctcaactcagaatggttagtttgttcatttcaatacataatggattattcttgttcatgtttattgcaaccttgatattcatagtaggatttgtcaatttcaagtatctatatctctgttctaacaaatgaaacagtctattaaggaaatgaatcctactattaatgcatttatactgaaacagcacaaaattatcgtgctctttggacgggtgtgggtgcacaacttgctcgggatgttcctttctctgctatatgctggtcaacactggagccggtaaatccctgttctgtcacttagtagttatgtttttgtttgctaatgtgcatgccagtatcatttgctaaattcattttaaaattaatggtatcttaacttactatcattgtatgcagattcgaagaaagctgcttggtatcgtcggagaagaaggtgatgcagctagtgtgctgggtgcaaactttgcagctggctttgtagcaggtagtcttgctgctggtgctacatgccctctagatgttgctaagacaaggagacaaatagaggtctgcacattctttcccacttccttcgtttttttctgcaataaatattcaaaagaatattgtttctgttttaacatcccaatcacatgccccatggtgcactatttatttaattttcttgccattgtgtacatcttgtttgtttcttttctgtttatacttcgcattaattatatcatttttcagaaggatacgcaaaaggcaatgagaatgaccacaaggcaaacattagctgatatttggaggtatgtcttccacatgctatgaaaaggcatttcattccagccaaatgaaaattattttctagtggtgctatagtggtatatattttcaagagtgaggtacatgggcggtccctaaacttgtgccggtgtgtcatctagatccctgaactcctaaaatgcatttttaggtccttgaacttgctatgtatgttatataggtccaaacaggttctaacccactcgatgtgctgacgtggcaatgccacggtgacgcctacgtgtcagtggaatccacatgtcaagcatatataaaaaataaaattaaaaaccatattttctcctattaggtagacagaaaaaaagataaaaattttaaggtagagaggagaaaatataattttctaattatatattttttctatgtgactgacacgtgggtccaactaacacgtatgaactatcgtggcatgccacatcagcgcatggaaggggttggagctcgtttggacttgtatgacaccccaaaacaagttcaaggatccgaaaatgcattttgagagtttagggacctagatgacacacccacacaagtttagggaccgctcgtgcacttcactctattttcaaacttgatctacttacaagtcaatgtattgagcctatacgtaaaactacattttagcagacatttctgcctgggtcaccttgtttgaagagaatgcaggttatctgaactggtcaaagagttagcaacatgcctagcgagagcaatcaatggctttcttcttagaaatggctgttgatagagaataacaattggacgattaatgagatcctgattttatttttttgaaacgaagagatcactgaaactttgactgttgcatccataggaaaactaacatagaactacactggaaaacgaaaggctttttttttttggtacaacaaatacattactgaaaataaaagcagaagagctaatcctcacactgaatacattgctgtgactctgtgagatggcaatgggtgcttgaaccagctgtggcccacccaaattatgtttgttttagctggtttggctaatgccctaatttgttctagaaagcatgttttgcttgttgcaaaagaaaggtgggtttgatcaagtttagtggttgctctccattttagttttatcttctaaaatgtaggtgtaatttcttgtattacattttcattatttacccctgagaggtcttggcttggggagtcgatttcagttggactgatttaattttaacctggcagctctggaggtatgaaaggcttgttcaccggtgttggtccacgtgtagcacgagctggcccatcagttggaatcgtcatttctttctacgaggttgtgaagtatgctcttcatcaaaggcacatatcatgaccaagatttgtgcaaaaggtagaaagatgtctgcaattttgtaagaacacggcgtagcctggtctcccaagtttgtgctggtcagttactaggaactttggtgggacagggctaggtgtaacttagaagatcaaagtgctcaacagtcgacaagcctttcatggatcagcccagtatggcctgatgctctctttgaagatttaagtttttgccatggagtgatctccagttttgttagggatggaccatgcataatctaatctttccttttgtaccagaagctggaagtgcttcgtttaactttgcaggaggacctgtagactgtagtggaagatgtagcactgacactgataagttaataataataaccttggatatggtatccccgaaccacaggagaagc</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0386800, RefSeq:Os08g0386800