Os08g0387500

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Revision as of 12:59, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0387500| Description = Similar to Sulfated surface glycoprotein 185 precursor (SSG 185)| Version = NM_001068249.1 GI:115476235 GeneID:434546...")
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Gene Name

Os08g0387500

Description

Similar to Sulfated surface glycoprotein 185 precursor (SSG 185)

Version

NM_001068249.1 GI:115476235 GeneID:4345464

Length

2546 bp

Definition

Oryza sativa Japonica Group Os08g0387500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:18397603..18400148

Sequence Coding Region

18397641..18398073,18398150..18398430,18398727..18398994,18399206..18399243,18399706..18400146

Expression

GEO Profiles:Os08g0387500

Genome Context

<gbrowseImage1> name=NC_008401:18397603..18400148 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:18397603..18400148 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>cgacccattcccccatctccgcgggaaacaaaccggagctcgccttggcctcgccgccggcctcctcctcctcctccatcgccgcacgctctccctccgaaccctaaccctagctcgctcgctccggggtcccgggccatgctctccacggcggcgccatcctcaacctccctcgtcgcctcgttcccgtcacgcgcgcgccggcgggggctcccgggccgacgcggcgtggtcgtcgcggccgcgggggcggggccgggggcgggggcggcggagaggttcgcggcaagcagcagctccatcaccgactacctgcggtaccgccgcccggggtccgccgggggaggtgggggaaccggggtgtgcggcggggagctgcagacggcggtggtgcggtacgagaagcggctcccgtggtcgctcatccaccccttcctccatgttgatttggtttctactgtccacattgctgacaaagaatacttcgatagactccagcaagcacttcaagattatgattgtgttctttatgaaatggttacaagtcgggagaacttaaacaatcgcaaggacccaacctttgcgaagaagctgaaatcttcacgtaggggattcagtattcttggcttcatacagaagcaaatggcaaacatcctttcattggattaccagctagattgccttgactatggcagtgaaaaatggcaacatgctgaccttgattttgagacattcaagcagcttcagagtgaaagaggtgaaagtcttttcacgtttgcggtagacatgacactgaaatcaactaaagccttggtacaaccaacattgcctgatggtcttgacttctggaggtctaagctgctttgggcctcacgtgttctaccaatgcctcttgttggactgttccttatcagtgggctttgcttaccaatcgacgatcaaggtggatatcctgagcttgaagcattgtccaggctagattttggagctgcactgaagatttttctggctaagcaattgacctccgatttcacatctatgacctcacccattgaggaaaagtcagttatcattggggaaaggaatagagttgctactgagaagatacaggaagcaataaaccatgggtacaagagaatagctgtcctttatggaggtgggcatatgccggacctgggaagacgtcttcgtgaagagctcaatatggtcccagctgacgtccagtgggtgacagcatggtcaattagaagccgggagctagacagggaatctcttccattcctgaagaccatggctgaagtctcagggtggcctttgaatagatacgagacacttgctctgcttatcttttcttcagttctcgcagtggatctttggttctgggagcttcttgtgggtactgccgtgaactgggcatctttggctggctcatggattgaacaatttaatggtccattttga</cdnaseq>

Protein Sequence

<aaseq>RPIPPSPRETNRSSPWPRRRPPPPPPSPHALPPNPNPSSLAPGS RAMLSTAAPSSTSLVASFPSRARRRGLPGRRGVVVAAAGAGPGAGAAERFAASSSSIT DYLRYRRPGSAGGGGGTGVCGGELQTAVVRYEKRLPWSLIHPFLHVDLVSTVHIADKE YFDRLQQALQDYDCVLYEMVTSRENLNNRKDPTFAKKLKSSRRGFSILGFIQKQMANI LSLDYQLDCLDYGSEKWQHADLDFETFKQLQSERGESLFTFAVDMTLKSTKALVQPTL PDGLDFWRSKLLWASRVLPMPLVGLFLISGLCLPIDDQGGYPELEALSRLDFGAALKI FLAKQLTSDFTSMTSPIEEKSVIIGERNRVATEKIQEAINHGYKRIAVLYGGGHMPDL GRRLREELNMVPADVQWVTAWSIRSRELDRESLPFLKTMAEVSGWPLNRYETLALLIF SSVLAVDLWFWELLVGTAVNWASLAGSWIEQFNGPF</aaseq>

Gene Sequence

<dnaseqindica>2076..2508#1719..1999#1155..1422#906..943#3..443#gacgacccattcccccatctccgcgggaaacaaaccggagctcgccttggcctcgccgccggcctcctcctcctcctccatcgccgcacgctctccctccgaaccctaaccctagctcgctcgctccggggtcccgggccatgctctccacggcggcgccatcctcaacctccctcgtcgcctcgttcccgtcacgcgcgcgccggcgggggctcccgggccgacgcggcgtggtcgtcgcggccgcgggggcggggccgggggcgggggcggcggagaggttcgcggcaagcagcagctccatcaccgactacctgcggtaccgccgcccggggtccgccgggggaggtgggggaaccggggtgtgcggcggggagctgcagacggcggtggtgcggtacgagaagcggctcccgtggtcgctcatccaccccttcctccatgtaagcctttttgatcgatcgaagctacttgactccgaattctggagaatttctgtacgaatctgaactcgtcttccgtggggatgggaattggtgttgtgcggggtgcttgccagaggcagagaggctcacctgattcgtgtttttattagttcccaactagaacaattctacgcgctcacatccactctgacagtttcaatcaacttgttgaaaatactgccctgccgggctgcccctgggttctgatttactactcggcctcctcacattttggatttttgtttttaatatagtcgtagtgagctatcgacatagatgaaatggagtgatttcctttttgtgagttagctttgcatttgattgattacaaattccaagtaataaagcacttcgtaaacttctgtgacttcccgattagcttattgcttgtggttgattgtgaaattctgtttgctgcaggttgatttggtttctactgtccacattgctgacaaagagtatgtgctctaggcccttttatgtttaaccattagtgtctactggcattcagatttgttcgcatggaaaaaaccttgtctatggcataatggcaatcatcatttgcttatctgagcataccctgtgctcatttccatttgcacaattttgtagtatatgcacaattcactactaagtgcattagctgaaatctacagttttgtttgacagatacttcgatagactccagcaagcacttcaagattatgattgtgttctttatgaaatggttacaagtcgggagaacttaaacaatcgcaaggacccaacctttgcgaagaagctgaaatcttcacgtaggggattcagtattcttggcttcatacagaagcaaatggcaaacatcctttcattggattaccagctagattgccttgactatggcagtgaaaaatggcaacatgctgaccttgattttgagacattcaagcagcttcaggtaataatgtggttacagtatcccttttgctgcctgcaacttttcccttgtcataatagctagagaataagaagtgtgctctttagattgctttgtgttattactgttggagggagatgttactgccttgggtttccatttgtcatagggtgtaggtttcaccttgatttgcaaactgaatatagcctaaaaccatttaaagccatatacacactattctgtagtccgtgctttctgccatggcactttcaaatttcaaatatactaaatgctaatttaccttccatttctgtcagagtgaaagaggtgaaagtcttttcacgtttgcggtagacatgacactgaaatcaactaaagccttggtacaaccaacattgcctgatggtcttgacttctggaggtctaagctgctttgggcctcacgtgttctaccaatgcctcttgttggactgttccttatcagtgggctttgcttaccaatcgacgatcaaggtggatatcctgagcttgaagcattgtccaggctagattttggagctgcactgaagatttttctggctaagcaattgacctccgagtgagtaccctctgtatccagtaaggaaaactatgcattaacaaactaattcttatttgcactctgtattttgtagtttcacatctatgacctcacccattgaggaaaagtcagttatcattggggaaaggaatagagttgctactgagaagatacaggaagcaataaaccatgggtacaagagaatagctgtcctttatggaggtgggcatatgccggacctgggaagacgtcttcgtgaagagctcaatatggtcccagctgacgtccagtgggtgacagcatggtcaattagaagccgggagctagacagggaatctcttccattcctgaagaccatggctgaagtctcagggtggcctttgaatagatacgagacacttgctctgcttatcttttcttcagttctcgcagtggatctttggttctgggagcttcttgtgggtactgccgtgaactgggcatctttggctggctcatggattgaacaatttaatggtccattttgacatctaatgggcagaagcaaaagaaaaaggaaacaaac</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0387500, RefSeq:Os08g0387500