Os08g0387700

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Revision as of 12:59, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0387700| Description = Disease resistance protein family protein| Version = NM_001068250.1 GI:115476237 GeneID:4345465| Length = 10816 bp| ...")
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Gene Name

Os08g0387700

Description

Disease resistance protein family protein

Version

NM_001068250.1 GI:115476237 GeneID:4345465

Length

10816 bp

Definition

Oryza sativa Japonica Group Os08g0387700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:18407104..18417919

Sequence Coding Region

18408585..18408598,18408694..18410636,18417014..18417834

Expression

GEO Profiles:Os08g0387700

Genome Context

<gbrowseImage1> name=NC_008401:18407104..18417919 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:18407104..18417919 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccgaggtgctggcgagtggtgctaccgggttgatcacatcactcctgggcaagctcgccagcctgctcgatgacgagtacaccctgctccgcgaggtgcgcggcgacgtggagttcctccaggccgagctgagcggcatggacgacttgctggtacggcttgtggagatggagaagaatggacacggcaccaagaagtggagggtgaagctgcgcgagctcgcctacgaagtcgaggacggcatcgattccttcacacaccgccttggctctgcccgtgacagggcagggttcgtgcggggtttcatgaagcagctgaatctgatggtgcgccaccaggtcgccaggcagatccaagaactcagggaccaaatcgaagtcgagtgcgcacggcagatgaggtacacccagcttggtggtggtggctcatcatccattgacgccgccgtagctgaccaaatcgactgccgcgtgaaggcgctgtatgtggatccggaccatcagcttgtggggatggatggtccggtggcgagcatcgtcgagctgctgaccatggaagaagacgagtcgtcggcaaggcagctccggatcgtgtccatctttggccctggaggtctaggcaagactactcttgccaatcaggtgcaccgcaaaatcaaaggccaatttgactatgctgctctggtgtctgtgtctcaaaggccaatcagggacattttgaccaagattgctccttcagtcatcccaactgacagcagcagcagtttagatacatgccaactcatcgaaatcgtcaaagattttcttcaagacaagaggtacctcattgtttttgatgatatctggagtacaaaaatgtgggagaatctgatgtcagttctacctagaaacaacaagaaaagcagagtaattactacaactcgcatgtccaatgttgcgagctcacgttctccccggtccaatggtcatatctatgaaatggaatctttaaatgatgctgactccaaagagttattttctaaaatcatttttgaccacaagggtaaatgtccaaaggcattggacgaaatagccgatgaaattttgaaaaagtgtggtggcataccgttggccataattacgttagctagtttgcttgctaaaaaaccaaaaacaaggaaagagtggaagagagtgaaaagttctattggcaatgcatgtgaactagaagggatgagacagacattatcccttagcttttatgacctgtcttatgatcttagaaactgtttcctatcatttagctccttcccagaggattatgaaattgatagagagagattggtactgagatggattgctgaaggattcatttcggggaaagaacaacaggaattaatggaggaagaaggaaacaactactttaatgagctagttaataggagtctgattcagccaattgatattcaatataatggttctgcacgagcttgtcgagtccatgatctgatgcttgagcttatagtgtccctgtcaaaagaagagaattttatcactacattgaatggaccggagtgtctacctatgccgagcaaaattcgatggttatctctccattccaacgaaaatgaagtaatgcaggtggtcacaaataatcgtcgccatgttcggtctgtgagtttcttcccgcctgttgcacagttgcctccttttgttgaattccaagctatgcgggtttttgatgtaaaaggctgtcagtttggggagcacaaaaaaatgaaaaacatggaaagtttaattcagttgaagtatctgaatttggcatataccaatgtgacagaacttccaaaagaaattggggaggttcatttcttagagactcttgatgttagaaattgtcaaatacaaagtttaccaccatcattatgccaattgcagaagttggtgcgactttttgtcagccttggagtcacattgccagataagattgggaagatgcaagcattggaggagctatcacatgttgccatcttatgcaactctttgaattttgtgaaggcactaggggagctgaccaaactgagagtgttccgagtagattgccggtattcatggcttaacgggaagaaacaagccccaaggcaatcagtcagcacgcatgaagatgttttgttgtcatctctgcaaaatttgttaaaaaagaagaatcttcgatcactagagatcgaccttacaaatggttcttccttggtgttttcattgatgaatccatactgtcctcttccccaactcgaagaacttgtcatttccaattccatttccagagttccaaggagcatgagatcgctgaaggacgttatccatttggaaatcaagcttgataggatggaagaagaagatctccatatcatcagagacatgtctcattcactgctttttctaaaaatccacttggaaataaccccagaagagaggcttatcattgactccgagggatttgagtgtctgaagcaatttgagttttgctgtgttggaatggggctgaaatttgtgcaaggggctatgccagatctcgagaagcttgatcttgatattggggttcgaaagaccatgtccaagtatggcggtttcgactttggcatcaagaatcttgaagcactcaaacatgttggtgtcaaacttgattgtcaatatgctgaaaatcgggagatccagtctgcagaggctactatcaggagtggagtccttccaagacgtataatgccacaaattcaaaggattggtgtgaacagatga</cdnaseq>

Protein Sequence

<aaseq>MAEVLASGATGLITSLLGKLASLLDDEYTLLREVRGDVEFLQAE LSGMDDLLVRLVEMEKNGHGTKKWRVKLRELAYEVEDGIDSFTHRLGSARDRAGFVRG FMKQLNLMVRHQVARQIQELRDQIEVECARQMRYTQLGGGGSSSIDAAVADQIDCRVK ALYVDPDHQLVGMDGPVASIVELLTMEEDESSARQLRIVSIFGPGGLGKTTLANQVHR KIKGQFDYAALVSVSQRPIRDILTKIAPSVIPTDSSSSLDTCQLIEIVKDFLQDKRYL IVFDDIWSTKMWENLMSVLPRNNKKSRVITTTRMSNVASSRSPRSNGHIYEMESLNDA DSKELFSKIIFDHKGKCPKALDEIADEILKKCGGIPLAIITLASLLAKKPKTRKEWKR VKSSIGNACELEGMRQTLSLSFYDLSYDLRNCFLSFSSFPEDYEIDRERLVLRWIAEG FISGKEQQELMEEEGNNYFNELVNRSLIQPIDIQYNGSARACRVHDLMLELIVSLSKE ENFITTLNGPECLPMPSKIRWLSLHSNENEVMQVVTNNRRHVRSVSFFPPVAQLPPFV EFQAMRVFDVKGCQFGEHKKMKNMESLIQLKYLNLAYTNVTELPKEIGEVHFLETLDV RNCQIQSLPPSLCQLQKLVRLFVSLGVTLPDKIGKMQALEELSHVAILCNSLNFVKAL GELTKLRVFRVDCRYSWLNGKKQAPRQSVSTHEDVLLSSLQNLLKKKNLRSLEIDLTN GSSLVFSLMNPYCPLPQLEELVISNSISRVPRSMRSLKDVIHLEIKLDRMEEEDLHII RDMSHSLLFLKIHLEITPEERLIIDSEGFECLKQFEFCCVGMGLKFVQGAMPDLEKLD LDIGVRKTMSKYGGFDFGIKNLEALKHVGVKLDCQYAENREIQSAEATIRSGVLPRRI MPQIQRIGVNR</aaseq>

Gene Sequence

<dnaseqindica>9322..9335#7284..9226#86..906#agtccactactctgagtacgagcacgagcacccccacaagctttgtagctctgctctgctcagtaggcaaacagatctcagcaagatggccgaggtgctggcgagtggtgctaccgggttgatcacatcactcctgggcaagctcgccagcctgctcgatgacgagtacaccctgctccgcgaggtgcgcggcgacgtggagttcctccaggccgagctgagcggcatggacgacttgctggtacggcttgtggagatggagaagaatggacacggcaccaagaagtggagggtgaagctgcgcgagctcgcctacgaagtcgaggacggcatcgattccttcacacaccgccttggctctgcccgtgacagggcagggttcgtgcggggtttcatgaagcagctgaatctgatggtgcgccaccaggtcgccaggcagatccaagaactcagggaccaaatcgaagtcgagtgcgcacggcagatgaggtacacccagcttggtggtggtggctcatcatccattgacgccgccgtagctgaccaaatcgactgccgcgtgaaggcgctgtatgtggatccggaccatcagcttgtggggatggatggtccggtggcgagcatcgtcgagctgctgaccatggaagaagacgagtcgtcggcaaggcagctccggatcgtgtccatctttggccctggaggtctaggcaagactactcttgccaatcaggtgcaccgcaaaatcaaaggccaatttgactatgctgctctggtgtctgtgtctcaaaggccaatcagggacattttgaccaagattgctccttcagtcatcccaactgacagcagcagcagtttagatacatgccaactcatcgaaatcgtcaaagattttcttcaagacaagaggtacgcacacatcttcaattcgatttttttttttggattagcacaaaatctgcacctagtacatagaacagagacaggttagttagcagaagcacaagatgcataatagaatttatcattgatctgagcaaaacttacacactgaaaaagacctacacctggaaaatgttcagaaatgttccatctagtgctattccaggcacacacagttgtctgacagatataatgctgcatgtgcaagataatatggttgttgctcatttatatcatgttctttcttcaaagaattacaaattttcatccgtacatcgagctagccatccgaaagaatgaaaccagttcatccctcaaacccccctgaatcaccggctccaatcctgtagtgctccttctgcaatcagccttcatcctccctctcctctccggctagggaaagcaagagagactcaccagtaagaaggtggtcaacggaggggagagtgccgctgccggggagagtgttgtgtctccgtcgagccgccgactcccagccgtgcccgcgccgccgcagccactttccccctgcgctctactcgtctccccccgtgcgcgaggattttttccactccacatgggcaactatttttttcccggcccaggacgagggagaaaggccgtagtcggtagtcggcctggatccaatccgtgacgggcttaaccgaaggaaaaatacaccaaaggtccctcaacttgacatcgagttacaaaatcatcccccaaccgcaaaaccagatatctagcatccttcaacttacaaaaccgttcgtgcaggtctttcagtggctttaaccccggttttatcttatgtagcggctgagtcagcgtgggacccacgtagacccacatgtcaggctgccacatcatctctctcccttcctcctctctctctcactcttctcttctcttcttttctcttctcttctcttctctgactcagtcggcggggagaggagtagcggggtggcgcgcgggcggcggaggagcagcgcgccggctgcgggaggagtagtggcgagggggctcccccgtcggtcgtcgcccacgaggcccacatcgcccccctacttggctcgacccgggcacgtcgtgggcgctcggcgtgcccgccggcaaagcctcgagccgcgtgcggccgcgcacgggctgcttctttgatgccagcgacgccaacgggacttgcctgacgggcgactgcggcggcgcactgtcgtgcatgagctacggtgagcagacgcaggagaaagcgagggcggcggccggtcgcgaatggcgtcgaagacgctacgtcgccgccgccagcgaagcagccccgcgtgggcgggcgccgcggcgttgggcgcggaggcggaggcggggctgccaggtgccgcggcggtggactcgaccaacttggagccctgtggatgtggaggtagggatatccttgtggcgacgacacgacgacacggcgcaggtatccttgtggccgccgtcgcccccgcttcccttcagtagctccgcgaggacctctccctcgacatcaacgagggtcggggaggcggagcaaagcaactgctttatgagcgcgtgctggtcccccggcgccgacagccatggcatctccagcagctcgtcgaggatccgcgcgccagagaggtccacgtcgagggagaggtcctcctctccgccgggctgtcgcggccgtcgtgccgccaccctcctcccagccaccatcctgcttgccaacagaagaggagaagagaagagaaagagaggagggagtgggagagatgacgtggcatcctgacatgtggggcccacgtgggttccacgctgactcagctgccacgtaggataaaaccggggtcaaaaccacccgaggatctattgtgaccggtttaatttagttgagggacgccggatatctggttttgtggttggaggatgattttgtaactcgatgataagttgagggaccttcggtgtactttttctttaaccgaatgcacatttttctatgggccaggctttaatatgcgtctgtccgacccacgggattgcagtccaagcccggacgttcccaggacaatcaaacaaggccttagaggggtgaggtatagaaccgtactggttgaggctataataaagccaagggtttgaaatctgttcctgttcccgttcctattccttcccagctgtgctgctcgatcccacggggcgactcggacgacactcatctgctcgttgcatctgagcagctcaccagcaagctgagcaaccgtaaaaacggtggcagtggggggtcttcccttcttcccgtggcacctagatctagcccttctagaggcaagttctggcataggtcgggctatcggctgatgggggcagcaggtggtcgaagcatgtactcctcagtgcttggcagcagtgaccgtgggtgaggggctgtggaggctaggtagcaactatacgtagatccaggctagtgtgaggcaggcagctaacatgcacagtggaggcgaccacgattatctggaagatgtgtccatgggtacggaagaaatgaaaaaaaattggtctcctcgctcctctcaccagtggccaactcattcctcatctcctcgctcgccagccgccgcctagtctcctcgctcctctcgctattgtttgatgtctagtcggcctccacctcatctcaccacttgacaataacaacgacgatgacgatggcctcgtaggggtggcgggaccctcagtacgcctcactggatttgacgcctccagatcccgatgaggaggagctcggaagctgcggtggtctagatccagtcaccgtcccactcatcgtgtcctgcccccaccagtcatcgtcgcaccctcgccattgtttgttgccctgccggtcaccacaccccccgtcggtcgatgccaacatgttcctccgctggctgtgatgagagaagaggggggggggggttgatgcgagcaagcagctcgtcgatccgggaatgcggttgaatccggacaaattacccggagcaccgcatccaacatctaaggggaatattactctctgggccgccatatcccacctctgtccatcaaccaaacaccctttaaaatttaggccaccagagcctatgtagataaatccaactatccaaacaccttaagatggactcttgtattaactaaaataactatttgcattgtaagttaagggttatgcatacgtagatatatgcataataaaaggccatttgggcaacttaatttgatgccagcattgtgttgccgcttaacgaaccatgccacttaataccgtagcgaggcaatttcaaaagctacccaaactccaacaaaccctcgttggctttaatctccatccacctagaaacaacattcccgttgcaggcgaccaagcatgagaaggagcgcagggaggtacgccaccactccatatatcgcccaaccaccacagccgtagaaccgctcccccttacccgctccaatccgttgccacttcacatgcactgcacatccactgtactccctatatccccaaaagatttaaatcctaggataaatctagatacatgtgtgtctagatttagattcattactaagatttaattttttttaaacagagtgattatattaaaaaaaacattagtaacccctctagagaaaaaaactgtgggtgcaaaagtatcactcacgattctaaatatagtagggggaaaaaagtaatgtcgtcagtacgaacttgctccccatccataagggtaggggtgaaaacggtacggaaactttccggattccggacctattttcgaaaacggaatatgccggtcggaattttttcggaatttttcggaaacggaaacgaattcggaactattttctcggaaacggaatcggaaatgataagggcagtttccgtcggaactcggaatcggtcggaaactttccggaaattttctcggaatttccggaaatttcctcggaattaccagaaattttgtgactgaaatacccttgattctttttttaagcactaaatagtgaataccatggtgtttggctgttatttttcttaaaaaaaatatttgttatgcaaatctaaaattacataagaatatttttgtgctacattgggatttatcaacaacattactcttttaaacatagataatttattcaattggatttattagtttgaagggttttttattccgataaattttcgttaccgtattcgcgccggttcgttttcgctccgttttcgatttcgataatattcgattccgttttcgtattcagggtttccgattccgatttcgattccgaaaaaaatatgaaaacgaaaacgataaagatggtttccgtccgtttccccgtaccgttttcatccctacgtaagggcattagcagtgcagctaccacacttgccgttcctcagtggccacctaacccaactaccttgaaggacacacactccacagtggaggaggccaaggatttgctaggctaggaccacacttgccgttcctaggttgcgctctctctctctctctcttctctctacctgtacccaccgtcggcggctgtgctccacctccctccccggctcatctccccctcccggtgcgcagctccctccctctctccgccgctcttctttccccctcttcgagcttttctcacagggatcctttcatctcccaatctctcactcctctatttcttctcaccggggaatcccatgcttcggggctgcggccggcagggcggcccgagctacgatggcaccgggctgcggggcggcctaagctgcaacggcaccgggtggcgggcgggtcgagcggtgacggcgccgggcgagtcgagcggcaacggcgttggacagcggggcagcccaagccacggtggcgccgggcggcgggcggggtggcttgagctgcgacggcgccgggcaactgcgcggtcgagtggcaacgacgccaaccggcgagctcccatcctcgtcgcttgaggactacgtgctcactgccgacgcctgtgcgaagccacttgcgcgaggctgcgccctcctcaacgctttctctctacttctccctgctttttttgttcgaagaactgagtatccaagtttggctcctagtacctcttttggctccgcatattgccgatgtggcgccaaatattcggttcttggctatgaggctgaacgccacctcagtgcgttgtgaaggccctaagagcctaagtgacgctgacatggatggaacgtcactcccctccctatcctttctctttgaccatgttggcgtcacgtaggcttctaaaggagtatatatgtggcattttttaatttgaacgtcacattttaaaaattctaggatatgaatatgcatttttcaagtataagaacttgatgacagccaaacacctcatttaagacgggtatagttgctgtcaccaaacacctcatttaagacgggtatagatgttttcgctcgatgaccaaatatgagtgagtgcatgatccctgcttaaaatctattcattgatttttaagaccattcattttttttttccaaaactattgtttcctattgtttcatcccaccagctatactaaaaaaataatatggctgaatttcttccattagatataatacatggatgtcttatattcactgcaatggaataatggatacacagtaaaaaagagataatttaagaaatgccattgacaagcgtccaaatccaagaaatgtcatcgataagtgtgaagtctaagaaatgtcatagtccaacgattttgtcccaaaaataccatcgtcgttaagattccgtccattccgcactgttaaatatattgttcattctatagcacttaacgacatggaatagacggaaccctaacggcgatagcatttttgggacaaagttatttgtacgatggtatttcttggaactcacacttatcgatgccatttctagatttgaatgcttgtcaatggcatttattggattatctctaaaaaaatcttatagccaccttctagccatacatacttaataaaaacctgatagtattggtcctatttgtttctgattaagatacaaattttatcttggtttcattggcacgctttttaatctgttaaacgatgcatttcgtgcgaaaactttaaataaagtttaatattagataaatccattttcaagataaaaataattaaaacttagttaatcatatgctaatgcctttctcgttttatgtccgtacttaatcttcatccaccaccgcttcgaacagggcctgactatcactgtaaaactgaatacaggtacctcattgtttttgatgatatctggagtacaaaaatgtgggagaatctgatgtcagttctacctagaaacaacaagaaaagcagagtaattactacaactcgcatgtccaatgttgcgagctcacgttctccccggtccaatggtcatatctatgaaatggaatctttaaatgatgctgactccaaagagttattttctaaaatcatttttgaccacaagggtaaatgtccaaaggcattggacgaaatagccgatgaaattttgaaaaagtgtggtggcataccgttggccataattacgttagctagtttgcttgctaaaaaaccaaaaacaaggaaagagtggaagagagtgaaaagttctattggcaatgcatgtgaactagaagggatgagacagacattatcccttagcttttatgacctgtcttatgatcttagaaactgtttcctatcatttagctccttcccagaggattatgaaattgatagagagagattggtactgagatggattgctgaaggattcatttcggggaaagaacaacaggaattaatggaggaagaaggaaacaactactttaatgagctagttaataggagtctgattcagccaattgatattcaatataatggttctgcacgagcttgtcgagtccatgatctgatgcttgagcttatagtgtccctgtcaaaagaagagaattttatcactacattgaatggaccggagtgtctacctatgccgagcaaaattcgatggttatctctccattccaacgaaaatgaagtaatgcaggtggtcacaaataatcgtcgccatgttcggtctgtgagtttcttcccgcctgttgcacagttgcctccttttgttgaattccaagctatgcgggtttttgatgtaaaaggctgtcagtttggggagcacaaaaaaatgaaaaacatggaaagtttaattcagttgaagtatctgaatttggcatataccaatgtgacagaacttccaaaagaaattggggaggttcatttcttagagactcttgatgttagaaattgtcaaatacaaagtttaccaccatcattatgccaattgcagaagttggtgcgactttttgtcagccttggagtcacattgccagataagattgggaagatgcaagcattggaggagctatcacatgttgccatcttatgcaactctttgaattttgtgaaggcactaggggagctgaccaaactgagagtgttccgagtagattgccggtattcatggcttaacgggaagaaacaagccccaaggcaatcagtcagcacgcatgaagatgttttgttgtcatctctgcaaaatttgttaaaaaagaagaatcttcgatcactagagatcgaccttacaaatggttcttccttggtgttttcattgatgaatccatactgtcctcttccccaactcgaagaacttgtcatttccaattccatttccagagttccaaggagcatgagatcgctgaaggacgttatccatttggaaatcaagcttgataggatggaagaagaagatctccatatcatcagagacatgtctcattcactgctttttctaaaaatccacttggaaataaccccagaagagaggcttatcattgactccgagggatttgagtgtctgaagcaatttgagttttgctgtgttggaatggggctgaaatttgtgcaaggggctatgccagatctcgagaagcttgatcttgatattggggttcgaaagaccatgtccaagtatggcggtttcgactttggcatcaagaatcttgaagcactcaaacatgttggtgtcaaacttgattgtcaatatgctgaaaatcgggagatccagtctgcagaggctactatcaggagtggagtccttccaagacgtataatgccacaaattcaaaggattggtattgcctcttgctcccaagaaaccttgatcttgtttcacttgtttctctttcattgttcatacattaatcagcagtcgtttgatcttttgaaggtgtgaacagatgaactttcttccagaaatagttgaatgctactgctttggtatttgcaggtatgtgttccatccgttcagaaataatgcttatttttcagaatctatctatctatctatgtatttatttattagtattaaagctagctttcttccaaaaatagtttattgttttagttggactattcatcagaatgggaaattctcggttgattcaatgtatacagcttcaataaatgatggttatgtagaagttttttttttaaaaaaaacgatggttacatagaagttttttttttaaaaaaaagaacgttggttatgtacagagtaacaagattttgtgaaaaatgaagatgccacttacgatacaagtttttatgtagtacatgtacaaagaagtggtttcacgaaattgggatggtattgtaaacagggttgcttttttttttttttaccaaaacgaaacaattcattctctctttatttgagagaatcccttatatgccactccaaattaaccggttccgttatatgccacttcaaattggcttctcccttttatgtcaccggttcaagtttgtcctcccttttatgtcattgtcgtcactccaccaccagtttaccgttaacttcatagtaaaaagacgcaattgcccttgagagttggtatacaactaataataggtattttagtactaatatagctactggatataacatatgaaaaatgatttttttccatcacatgcaatttttgccatcaccatcacaaataaattttcaatataagcatgaaacatgcaattttccaacaatatttttaatacaaagagcatttttcactggttttgacaaaattttgttcattcaaaaaggatttaaaataaattagttatgattttttgaagtttacacatttttttagttgagagggcatatttgtcatttacaaaaaaaaaaactaacatttgactaacagtcaactaacactatagtgctgagagtgacataaaagggtgaaaaaacttgaaccagtggtatataagggataagccaattttgagtggcatataaagaaactggccaatttctagtggcatataagagattctctcttatttgaatgttactatgttaagtttctttggaggtacgtacgttcatattgattttggtttaaacctacttttactctgctttactttgcagggaactcattggattcgattctaggccctattgtgaaagtgtgatgagagacaaataacagatgcaacacacatcgttatttatggatgatggttatgcaactctttgttaatcatcatatatgaaaatttagctgcttttaataatgtcatgtcatctaaagtatgctggtgatctttagttcttttgtgatgtagacggatgttatgtaaacaacgtaataatttggctctaccttctcatgaagcagaggccgtgctttttttcactattaaaaaaaattctc</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0387700, RefSeq:Os08g0387700