Os08g0389700

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Revision as of 12:59, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0389700| Description = Protein of unknown function DUF81 family protein| Version = NM_001068254.1 GI:115476245 GeneID:4345471| Length = 535...")
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Gene Name

Os08g0389700

Description

Protein of unknown function DUF81 family protein

Version

NM_001068254.1 GI:115476245 GeneID:4345471

Length

5357 bp

Definition

Oryza sativa Japonica Group Os08g0389700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:18540705..18546061

Sequence Coding Region

18541057..18541242,18542141..18542300,18543433..18543633,18543721..18543785,18543944..18543971
,18544045..18544121,18544212..18544298,18544451..18544501,18544851..18545072
,18545234..18545327,18545406..18545546,18545638..18545723

Expression

GEO Profiles:Os08g0389700

Genome Context

<gbrowseImage1> name=NC_008401:18540705..18546061 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:18540705..18546061 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggggaggagatggcacgccctcgccgccgtcggcgtggccgcctgcgcggccgccgcagtcgccgccggcgacagggggttcacgttcgccgacgcggtggcggcgccggaggaggtgggctacatgaggaaagtcgtcaactttctgtggagcggcgaggcctcttatcaccacgtgtggccgccgatggaatttggttggaaaattgttttgggaatattaattggattctttggagcagcgtttggaagtgtaggaggagtaggtggcggtgggattttcgtgccgatgctgaccttgatcattggtttcgacgcgaaatcatcaacggcgatatcaaaatgtatgataatgggggcagctgtgtcaactgtctactacaacctcaagctgaagcacccaactttggatatgcctgttattgactatgatctagccctgcttatccagccgatgctcatgctagggatcagcatcggtgttcttttcaatgtcatattccctgattggctcatcacagttctattgatcatccttttcctaggcacttcaactaaagcttttctgaagggtgttgagacgtggaagaaagagacaatactcaaaagggaggcagcaaagcggttggagcaaatagctgaagaaccggagtatagtccgctgcccacagggccgaatgccacagctgagtcaaaagccccatcagatgaagcagcatctctatggcaaaatgtttactggaaggagtttggacttcttgcctttgtttggatagcattccttgtgcttcaggtcactaagaattacatgcctacttgctccacgtggtactgggttttgaactttctccagatcccggtgtcagttggggtgaccatgtacgaaggattgggcttgatgcaggggaggagggtcatatcatcaaaaggagatgaacaaaccaatctaaaatttcaccagcttctggtgtactgcttttttggaatgatggctggtgttgttggcggcttgcttggtcttggtggcggcttcatcatggggcctctgttcttggagcttggaatccctccacaggtctcaagtgccacagccacctttgcaatgatgttctcatcttccatgtctgttgttgaatactacctcttggaccggttccctgtgccatatgctcttttcttcaccgttgtggccttttttgcggcgattattggacagcacattgtaaggaagctgatcaattggttagggcgggcatcactcattatcttcattctgtccttcatgatcttcatcagcgcaatctcactaggtggagtcggcatctccaacatgattggcaagattgcgcgacacgagtacatgggtttcgacaacatctgcaattatgatgtataa</cdnaseq>

Protein Sequence

<aaseq>MGRRWHALAAVGVAACAAAAVAAGDRGFTFADAVAAPEEVGYMR KVVNFLWSGEASYHHVWPPMEFGWKIVLGILIGFFGAAFGSVGGVGGGGIFVPMLTLI IGFDAKSSTAISKCMIMGAAVSTVYYNLKLKHPTLDMPVIDYDLALLIQPMLMLGISI GVLFNVIFPDWLITVLLIILFLGTSTKAFLKGVETWKKETILKREAAKRLEQIAEEPE YSPLPTGPNATAESKAPSDEAASLWQNVYWKEFGLLAFVWIAFLVLQVTKNYMPTCST WYWVLNFLQIPVSVGVTMYEGLGLMQGRRVISSKGDEQTNLKFHQLLVYCFFGMMAGV VGGLLGLGGGFIMGPLFLELGIPPQVSSATATFAMMFSSSMSVVEYYLLDRFPVPYAL FFTVVAFFAAIIGQHIVRKLINWLGRASLIIFILSFMIFISAISLGGVGISNMIGKIA RHEYMGFDNICNYDV</aaseq>

Gene Sequence

<dnaseqindica>353..538#1437..1596#2729..2929#3017..3081#3240..3267#3341..3417#3508..3594#3747..3797#4147..4368#4530..4623#4702..4842#4934..5019#ttggcagttgccacaaggatatcgtcgcttccgcttctctccctctctcgccccgctctacctccatcctcttcctcctcgcattccttgccaacctcgccgccccggcctccgacgatcgccggccgccgcctccacagtttccatcgaacgccagggttggtttccaagaactcttcgcgctatctatctatctatctatctttgtaagttcattgcgaggcacagatcaaagaagcaaactcgctgccttatttctctgaggcctggaagagctcaaagatttaattgcactttccttctttaattggatttcgcatgcagggggggctaaattaaagaaggatacaaaatggggaggagatggcacgccctcgccgccgtcggcgtggccgcctgcgcggccgccgcagtcgccgccggcgacagggggttcacgttcgccgacgcggtggcggcgccggaggaggtgggctacatgaggaaagtcgtcaactttctgtggagcggcgaggcctcttatcaccacgtgtggccggtaatactactactactacaaagcacactctcttctgtttctgacaattaattaatcttggagctgtatttttttttgtccttttttcccgtgttggaacatgttttttttttatgtatatatttttagtaagtatcttgtttttttttttagttttgtcatttttggtgcaatcatctaaaaaaagagtttaagagttctggtggtgctgatgtagtattttgtttgattcacggtttaaaactacgaaaatctttacctttctctttctttactactggctttatataggattctcagttattatcggtttatcctaaaatttggtcaaaaacatgtctaactgaatggagtgttcctaccttgagttttttcaggggaataaatttgctggcttaattgctaaagactgcagttttgttttgtggaagaacactgcacttatctttcgtgatgaccctgtcaatagtagttcatatactgctctccattttttataacatgttgattttttacagcatatttataggctgtcgattttttgtaggatatttcgaacatcttttatactccctctgttttatattataagtcatttgacttttttatagtcaaacttctttaaatttgaccaagtttatagaaaagcatagcagttttttaaacacaaaccaaacatactataaaaatatattcattattaaatttaatgaaactgattttatattttagatgttgctaaatttttttataaatttagtcaaatttcacaaagtttgactagaaaaaaaatcaaacgacttataatatgaaacaaagggagtatatatatacctctcgtttttgtgtcaatatgccgttaatttgttgatttaaatgaatcactttgtttttgcagccgatggaatttggttggaaaattgttttgggaatattaattggattctttggagcagcgtttggaagtgtaggaggagtaggtggcggtgggattttcgtgccgatgctgaccttgatcattggtttcgacgcgaaatcatcaacggcgatatcaaaatgtgagggtttagttcgtttaacagcatttcatctgttcttgcatggattatctgaaagaaggaacctattatgtttgtcctttgcagtcattgtcagcactcagcagtgcaatcaatatcatccttattggtaccattgaaccgtgcctttcaaaataaaagataagtactgttgcttcagaaagaaaaaaaaaaagataactgaagctttgaaaaaacgagaaccttgtgttcatgtttacaatgaacccataatgattagtactacctccgttttttaatagatgacgccgttaactttttctcacatgtttgatcattcgtcttattcaaaaattttatacaaatgtataagatataaatcacacttaaagtactatgagtgataaaacaactcataaaataataaattataattacataaattttttgaataatacgaatggtcaaacatgtaagaaaaagtcaacggcgtcgtctattaaaaaacagaggtagtattgtttaccgtggtggaccgataatgattattgtttctacactatacagaagatcagcttagtctgtccgacccatgcattacgaatcatgtttctatttcatttttagtgaattctataattttctttgacccacttccacataatttggttttgagacttgtctaacagtcatcaattgaaccatacatatgacattcacaaaaaggggaaaaaaggaagcaaagaaccgtacataacttggaatattcaccaaattgctggtgatctattttttagaatactggtctacatctgaaaatggatgtttagaactttaagtgtttgagaatagtcaaatatcacttcaagagattgttgtgcaatgttactgcactgtttctaaaactgtactgtaaagtgagtgcagtactgtactttatacttattcacataaaccatttttacaatttgtaatgcaacaggagataaatccaatgcaaactttataagagcataacaattatgaaactcttagcatctaacatttcaaaaaataatgacacagggaaagtagaaaacagtgacagatatatgcgcgaaacgtttgttaggttcatgatctgattaagccattataaactttggaacaggtatgataatgggggcagctgtgtcaactgtctactacaacctcaagctgaagcacccaactttggatatgcctgttattgactatgatctagccctgcttatccagccgatgctcatgctagggatcagcatcggtgttcttttcaatgtcatattccctgattggctcatcacagttctattgatcatccttttcctaggtgctcccttgtgtcctgaaacagcaaaaaatggcttaacctattgccttctgttgacttcagtttaaatttccaattaaattgtaggcacttcaactaaagcttttctgaagggtgttgagacgtggaagaaagagacaatactcaaaagggtaatatttccttccccttgcaatcttgcatctatcagctttcaaccaacattccagatttcaagcttgacaatcaaagcatcattaatattcctttccttcattaatatactactaatctgccaatattgatcttcttgtggtcccactcattttaggaggcagcaaagcggttggagcaaataggtgagtatgaaacaaaattactcaattttcatgaaatgtagatattgttgctcatatagtctttatgtatcagctgaagaaccggagtatagtccgctgcccacagggccgaatgccacagctgagtcaaaagccccatcagatgaagcagtaagaaaaaaaattgtgatctttatattccctggcattggttagctatcatttgaaggacttaagaatataacttacctgatactgcaggcatctctatggcaaaatgtttactggaaggagtttggacttcttgcctttgtttggatagcattccttgtgcttcaggtcactaaggtgtgcgcctcaacttaacatgaatgccaggagtttttttcttttttgcaactataatgcgaagagagatattgcattccaagaaacaaaaatactgtagcattgacagtaacatccagtcaaccatcttatattatttttcttttttgcagaattacatgcctacttgctccacgtggtactgggttttgaactttctccaggtattgtactgtcttacctcgaatttgaataatagattcatagcttaggtagttttatgcaaatgttgtacagaatagaagatatgtatcacttgatatttaagaggcttttcatgccatcaggctgttaactacctggacacatcatcacttattgctataaattaactaatttttttgcagaggttgtaatgcatcatagtggtccattcttaattttttctcgaattggtcattgattagaactgcatatggcatccctgctagattgtacatctcatggcatgatcatatccaatataacctagctagttaactgttacagtgcatcttttcttgagaaatgcagatcccggtgtcagttggggtgaccatgtacgaaggattgggcttgatgcaggggaggagggtcatatcatcaaaaggagatgaacaaaccaatctaaaatttcaccagcttctggtgtactgcttttttggaatgatggctggtgttgttggcggcttgcttggtcttggtggcggcttcatcatggggcctctgttcttggagcttggaatccctccacaggtaacttttgggttttgaatcatgaatgcttttgttcatatgcatttctgaatcatgaatgctttttgttcatatacattatgcgcttctttcatacctgttgaattttgtcggattttgttgatgtttgtttttcgcctccataactgaaactatcacaggtctcaagtgccacagccacctttgcaatgatgttctcatcttccatgtctgttgttgaatactacctcttggaccggttccctgtgccatatggtactctctcttccctgcacacacctaaaacacaaatgatgccgtgcatttgacatttaatctttgaaccctttgcagctcttttcttcaccgttgtggccttttttgcggcgattattggacagcacattgtaaggaagctgatcaattggttagggcgggcatcactcattatcttcattctgtccttcatgatcttcatcagcgcaatctcactaggtaccatttcctcccccttactgcactgtaattagttcggaaaccatgactttaacacagtaccactgatgcaaccatttgtaatctttaggtggagtcggcatctccaacatgattggcaagattgcgcgacacgagtacatgggtttcgacaacatctgcaattatgatgtataaggctcaggctcacaagggaaatatatgtgcagttcagtgaatagaacattgtgatgtggatttttcagatgtcaaattgtagcaagtacagattgaagcataggggcatgccgatcaatttttttgcctgtaatttaagtaattattattgcccgacaactctggagaggcaaactccaaacataagcagtcgatattctctgaagagaatagcaagagcagatcatttattattctttttactggtttcgttgtcatcgttttatatttaaatgttgtaagaaaaagctaaacagatttggagctcagtgttactgttatttttttttccagtgttc</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0389700, RefSeq:Os08g0389700