Os09g0427100

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Revision as of 07:26, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0427100| Description = Hypothetical protein| Version = NM_001069763.1 GI:115479268 GeneID:4347116| Length = 5638 bp| Definition = Oryza sa...")
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Gene Name

Os09g0427100

Description

Hypothetical protein

Version

NM_001069763.1 GI:115479268 GeneID:4347116

Length

5638 bp

Definition

Oryza sativa Japonica Group Os09g0427100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:16156168..16161805

Sequence Coding Region

16161044..16161306,16161425..16161482

Expression

GEO Profiles:Os09g0427100

Genome Context

<gbrowseImage1> name=NC_008402:16156168..16161805 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:16156168..16161805 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgataacattttggatattctgcatcgccttctatgcttggagctatcaattacaaaagggaaatgaaggagaaacatggattggttcccgggacaagacatgtgagtcattcaagcgttgctggagaagaacatgggcttgcactgaggcacagcctgcagaaacaggggacagacgcaaatgcctccacatttcttcgtcaaccaagcgctcatggatcacaggaaaaatgcacatacatgtggagcgtgcggcatccacccggccatgtcacatactcgatcccttcactatttatgtatgggaagagctagtttag</cdnaseq>

Protein Sequence

<aaseq>MITFWIFCIAFYAWSYQLQKGNEGETWIGSRDKTCESFKRCWRR TWACTEAQPAETGDRRKCLHISSSTKRSWITGKMHIHVERAASTRPCHILDPFTIYVW EELV</aaseq>

Gene Sequence

<dnaseqindica>4877..5139#5258..5315#ggcggtggccccgggccccggctgggctccgcctccccgacgcttccctgcagccgcggcgctcccctccggttcggaccccctcccctctcgctctcccgccaagcagttgcgtgtggttagctggggcctctctctctcgcgtggaaactgaatctgcagcggggttggggtttcctgaatcctgaatcctttggtttccttggtttgtccgtttggggtttggggctgcgaacttgccatcatttgtgcacattatgttcgtagcttttcatccttttgtaacataggattactacgaggcctctactcataagtcgtaagtcgtaactctaatctatagttttttttcgttcttcgatgtgcacgaatgagctcatcaacctgtacatttcagaatttgagatggcatatgtatccctatgcggctatgccccgtatccttcatgtccaaccattggatgtaattttatgtttgccgtcaagagcccatacgccattgtgcgactgtcccattctctctcaatgtgagtattactttctttgtgacattgtaatgttttatttctagtgataattgatggcatgaatagtcgcaacctgttcttgagatagtttcagcattgctctctccttgtgatatttgtttgggtctagtaaaattagatatattatgtggccatcaagataataatgagacattgtcctattcaacattgttgatattttaccacagtacattttcttggtcccgactcatgtgatcattcctgacatttacctggtgtgactaacagggatgtagtggtttcagtttttttttttttttggaatagcatacaatgttccatatcaccatatgaactgccctgtcagtcagactgaaatattagacatatcacatgcatgcacatggcttaaagcctgacatttgaatgttctcgcaatttgcaaatggtggaaaggctgttcttgctgtagaactgtacctacataataaatatgattttctgttttttggttttattgaattttctctgtaaattagaagaaatgcatgaatctgggattctgcttcaatcatggcattaggtgctaagcaacaaaggttgcttagtttgttaaacgggtataatcttgtatgatttagtttgctctgttgttcaactatcagtgacttggagtgttctttgtgttgtctgtgccacttcagcagatatgtgcctatgatggatagtgcaaattgcagtatcagagacacatgctcacacatggatgggctccatgtgtttcaataaagtcatgcagctcccaggaggtgtaccattaaggtacagtggaccttgacattatatacgtttggctgtacctcattttcagggtactttctgaaagatttgtccacaatgggctacggcagcatcagacgcttatgatttttaaatgtgaggtttagttttagattgataacatagcagtgccgattgctacacaatgatttttgcttcctctttttttctgaaggatcttgcgaagaaagaataaacatgatagtttcccttaatatatggttggcatgaccgtgtcatttagcaagtttgcacattgatatttcagatatttttcttacttttttgataaaggaatatgattagtctggaagaacatgtaatgctttgtgattttagaaaacagaagataaaacagtaaatgtgagataatgcttgtgttgaaatgattgtcttggtatgttttgggcagatgcaaaatctataatgccatcaattcagtgatgtctacagaatatctgggattgaatataatggaaaaggacctactatcacatatacaatagctctggcttgtagctgaactgttttggccagtggcagtagttttgctgtaacaagctatatgatatggcagataatcttattgattatgccagcttagtcttaatttctcttgtttcctgataagtaaggaattcagttttgccaaaagtcggttgtcacagtagacgatgaacggatctaattatacttctacagagtttgttaaagtgtgcatgcgggtacaataaggatgtttcctaagattttagtcatgcccgagctattcgagggttgagaatgttggttacatatattttcacaagcagttattgcaacttctatgcagtcctctttgtacctttgatgccgctacatggattagtaacgtagtgtcgattcgaatgttggattcgataagttcttgggatcctctagccttcctttcacttgtcattctgtatcccctattaaaatttattgaccattattgagtactgttgcaagttcctatcagtcaccaattttttttagtgatcgcatgaagagttaagactttattatgtagcaagtagatagtattgagcatgatttttagtacatactggtgatctggaaaaatgccagatatgtttgtttccttgctgaatgttgaaaagcctgcagttttgacacacctggataattcataagtagcatgtcctatggtaagatctggcctcgacgtaactctgtcatcatcactagtacatcatatgttgatgtgacatacgagcaaatattctttccatggttaaaagggctggaaacccacagttctactagcagcaatttaccttgaataacatacaatgtacgtttccatccattcacttccattcagttgcacaatcaaatctgataaatctttctttaatatttttttcagttttttgtaaacagcacaattatctgatgtgatccaacacagcatcaatatcaatacagtatgttggaggagaatcttgcttgcattggagtatgcgtagagatcgtctgtcatggattttacttgtgtttctaggctcttgcaggtatgctcttaagcactagatcaatgctcttttgagaataataactcaattgttccccatcaataaaaatctccatagtttaaaatagataaaaacaggtagaactttcctgatttgataagttcaaaacttgtgcaataattcaacttcttcatgagatagttgaaagggaaaactgaatagcaactatccacatgccacacaccaaagctttgaccattgttctcatggtgaacaccactcatagcattgtcagaaacaatggctggcttctccagccaaacaaactcctttataggagccacgagcatactaccactactactcgggggtacaacacgagagagatgaggcaagaaacaccctcctctcccattaaatgtacaactgcaacaaattctgacctcaaaactcaaaccatggacatttcaatgaactgagatggccgatggtgcggcatccttcatgcaccatagattgcggcgagcttccgcaacacggccaccttcagctcaaggatgcagatgtactcagccgtttgccggagcagcacatcgacgttgtcctcatgggcatctggtactatcttcttcagctcccttagcctcctctgcaccatgtgctgaaggggcttcctatgcaccgacaaggccactcctttgttcttccctactgtgaacatggatctcctcttcatctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctccaaacttatgctttgcaaattgagatttttgtgttgtgagacacaagtcacaatacaggatgggggtatatataggtgagagcatagggatatttcacttggccatgtgggttgaaccaggttctaacctgtggaatgagctgtaaggatagctagttctcataagctatgaattatgtggctgtcacataggacggtgccttaactatttgcaacatgtgtcgtactggttataaactaggacttcggtcgtccctagtagcacagaaatcttacttttgctcactgattttgcactatgcttctccctgcatttgtatgtctcacgacatggccctatttggtacaatattaaatttatatagtcttacataatgtaaatatccaccgatccaaataatacactaaatttcccttagaaagaatatctagtgtatacaagggtggaaccgggttgaaatagatcacacctagggataagctaatgtatccttgttatacttcaaatctttaggattttcatataattttgatggggcttaaatggggttatgcctaagcgaggcttaagccccacacctggatccaccacagggtatacatgcattgtccaatgtattttcttgcctcttattgaccacgtgttaattgcacattttgtgtcttctcattgggacttaaattgacaaattagtaggttatacttttttgaaaagaaggttggcacgtttcattcctcatgcgttgtgaacttgtttctgtcatctcttgatgttgttattcgtagtctagtagtctatcaacacaagcctaaaactatatcaagcaaaatggccatctgttctttctcacctgcaattctagcttaagacaaatcttcttgtcctaatcgcaatcatcaaatggttagtattatttgcaatgattgaaggaaatccccatgtgatgtcttgccaacttgcgacgtgataactgcatgaggctgcaacctgatggaaatctctcgctgtggccaagtgccaatcacacagtaaaagcacacgcatggccaaatctggaatggagaaatttcaatgtaggtttagtcctgtgattcatttaatgttgagaagaaaaaaacgctcagaaagttttgggccctgtggtttttcactcggagagttcttgtatgaatttgccaaaaaaatgacacgttggatttttcgcaggctctatgataacattttggatattctgcatcgccttctatgcttggagctatcaattacaaaagggaaatgaaggagaaacatggattggttcccgggacaagacatgtgagtcattcaagcgttgctggagaagaacatgggcttgcactgaggcacagcctgcagaaacaggggacagacgcaaatgcctccacatttcttcgtcaaccaagcgctcatggatcacaggaaaaatgcacatacatgtggagcgtgcggcatccacgtaagtcttaatcctttcccttggctatcatttttgcagataatcttttcaatggggtctcatcggtgtgcatgctgttttatggcatttgcaatttgcatttcccacgggggagcagccggccatgtcacatactcgatcccttcactatttatgtatgggaagagctagtttagttttctccaactacttcatggagtaattacatgtgtcattcggataatagagaatatggaacatgacagcaaagttagtgagctgacggttcagtagagaatatggaacgtgacagcaaagctagtgagctgatggttccaagctaggtgatgatttcgtctctgttttaaaaaaatatgttggaatattatgtctagagatcggcacatgtttttttttttccatctcctttttgggtcattttctgtaaaataacattgtttgtccactcattgggagcaagcggaatgcatgcatcatttaaaattcaacatttttcagg</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0427100, RefSeq:Os09g0427100