Os08g0389800

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Revision as of 12:59, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0389800| Description = Conserved hypothetical protein| Version = NM_001068255.2 GI:297608519 GeneID:4345472| Length = 3024 bp| Definition ...")
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Gene Name

Os08g0389800

Description

Conserved hypothetical protein

Version

NM_001068255.2 GI:297608519 GeneID:4345472

Length

3024 bp

Definition

Oryza sativa Japonica Group Os08g0389800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:18550547..18553570

Sequence Coding Region

18550547..18550720,18550872..18550994,18551325..18551590,18552110..18552534,18552556..18552669
,18552824..18553198,18553296..18553570

Expression

GEO Profiles:Os08g0389800

Genome Context

<gbrowseImage1> name=NC_008401:18550547..18553570 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:18550547..18553570 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcaggacgaggagtccagcagaagagcacaggcgtcgccgggcttctggtgccgtcgtctcatctggtgcagcctttgcctgccgtagcgcacgacatggcaggacaatcttcacatgaacacgatgtaatcgttggggatcgtggagccgatggcaagcagagaacgcagatctccgagtttatgaccatggaagaagatgttgccggcgctatcgatgccaacgctaatggtgatgacaacacactctgtcgcatagtacctgaagagatggcagataaagcaccaaatcagtttagtatttgtcaaaagggaatttggacagtgcaaaaagttgtacttgaacacaaccattgtcttgttagtccaaataagtcgcacaagctgaggtcccaacggcgtgttatagaagcagataggcagctaattggccaaataagggaagccgggatgaaaccagcgcaagtgtatgagttcatgaaggagtggtatggaggagctgacaaagtaccattctcaaagatggattgcaataatgagatcggtcgcgaatgcaagaaatgtgtctatgaggagagatcggagtatcatttcaacaagatgtggcatgaattgtggagtgaatacaagcttgaggataacgtatggatgtcaaatctatataggttgaagaaaaagtgggctattgtctttcgtgactcttttacagctgatatgacctcgactcaaaggagcgaaggtatgaataatgtcttcaagaaaagatttcgtaggaaacttggtctttctgagctccttgtagaatgtgataaggttgctgccagtcttcgtgaaaatgagttggatgcagattttaagtcaagaaactcgagccccgttacttgcatcccaaatttacctatgttgaagaccgcagctgactcatatacaaggaagatgtattcagagtttgaagaggagtttacaaaacaattttcattatcatggtcaatattgacattcatggttatgcccatggaatcagatcaggaagcaacagttgtgtataacactgcggatatgaccattacatgttcttgcagaaagtacgagtccattggtggacaaaatatgcaaaaaaaaggatttaatattgataaacaaggaagtgagaaggaaactttgaaaacacatgctgcacgtatctctcaaaaggcaacatccatcgctttgaaatgttcagtttcgaaagaacttcttgatgatttggagaaagccataaataatttggacttggaggcagatagttctctaagcaagatgcaagaaaaaacatgtgaggttcctctaaattcaaatgactgtgttatggacacattaaatggtgcaatatcaattagagttcctcgagtggtcaaaggcccaaagagtagacgatcaaaagatgcagttgaaaagaagaaacggaagaaaacaaaaactgctaagaataaaggagaagatctaaataatgcatcagaagatgaagatgaagatgttggtgatgtgtgtgggcaatctttgaccatggctgcaaatgatgtgtgtgggcaatcctcgaccatggctgcatatgatgtgtatgggcaatcctcgacaatggctgcatatgatgggtttgggcaatcctcgaccatggatgctcctttaatccaaggcggatttacaagtcttttatttggagttcagcaagattcagccatggctgctagaaagttacatttcaattaa</cdnaseq>

Protein Sequence

<aaseq>MAGRGVQQKSTGVAGLLVPSSHLVQPLPAVAHDMAGQSSHEHDV IVGDRGADGKQRTQISEFMTMEEDVAGAIDANANGDDNTLCRIVPEEMADKAPNQFSI CQKGIWTVQKVVLEHNHCLVSPNKSHKLRSQRRVIEADRQLIGQIREAGMKPAQVYEF MKEWYGGADKVPFSKMDCNNEIGRECKKCVYEERSEYHFNKMWHELWSEYKLEDNVWM SNLYRLKKKWAIVFRDSFTADMTSTQRSEGMNNVFKKRFRRKLGLSELLVECDKVAAS LRENELDADFKSRNSSPVTCIPNLPMLKTAADSYTRKMYSEFEEEFTKQFSLSWSILT FMVMPMESDQEATVVYNTADMTITCSCRKYESIGGQNMQKKGFNIDKQGSEKETLKTH AARISQKATSIALKCSVSKELLDDLEKAINNLDLEADSSLSKMQEKTCEVPLNSNDCV MDTLNGAISIRVPRVVKGPKSRRSKDAVEKKKRKKTKTAKNKGEDLNNASEDEDEDVG DVCGQSLTMAANDVCGQSSTMAAYDVYGQSSTMAAYDGFGQSSTMDAPLIQGGFTSLL FGVQQDSAMAARKLHFN</aaseq>

Gene Sequence

<dnaseqindica>1..174#326..448#779..1044#1564..1988#2010..2123#2278..2652#2750..3024#atggcaggacgaggagtccagcagaagagcacaggcgtcgccgggcttctggtgccgtcgtctcatctggtgcagcctttgcctgccgtagcgcacgacatggcaggacaatcttcacatgaacacgatgtaatcgttggggatcgtggagccgatggcaagcagagaacgcaggtacattgcctagctaattgactcatgctttttcatcagtacatgcatgcatgatcgtgagtgatcgtctttcatgccctcatcgcaaatactgatgtgtggctaatacgtaccgatgtgtgatcatatcgtgcatgatcatcttgcacagatctccgagtttatgaccatggaagaagatgttgccggcgctatcgatgccaacgctaatggtgatgacaacacactctgtcgcatagtacctgaagagatggcagataaagcaccaaatcaggtaacgataatttaatagcaaattcgatggaaaacagaatatttcatactgtggtaatataactcatttatcgtacaacaggccaatgataaagttgcacaaactttgatcttgcctcaagttggaatggcttttgattgagagcagaaagcgtatgatatgtacaacacctatgccgggaagattgggttcagtattagaaagagccaagcaaagcaccgagtcgatggaactatataccagaaatatatagtttgtagtaaccaaggacaacgacagactaagtcatcactagacactactaggacgagttgtgatgctcgtgttcagtttagtatttgtcaaaagggaatttggacagtgcaaaaagttgtacttgaacacaaccattgtcttgttagtccaaataagtcgcacaagctgaggtcccaacggcgtgttatagaagcagataggcagctaattggccaaataagggaagccgggatgaaaccagcgcaagtgtatgagttcatgaaggagtggtatggaggagctgacaaagtaccattctcaaagatggattgcaataatgagatcggtcgcgaatgcaagaagtacttagaatccaatgacacacaaacactgttggaatacttgaagaataagcaattaaaggatcctgcatttttttacgccatccaaatagacaaggaagatggtcggatagctaatttcttttgggcagatggtcaatctatcatggattactcctgttttggtgatgctgtgtcattcgacaccacatttgatactaataagtttgaaatgccttttgctccactccttggaaccaaccatcacaagcagacggtaatttttggtgttgcgttgttatttaatcaaactattgaatcatttgtttggctctttgaaacttttctaacagcaatgtcaggaaagcatccaagcacaattttcactgatcaagacacggccatggcagcagcaattgctttagtattcccaaacacaagacatcgtctttgtttgtggcacatttatctaaatggtggtaaaaatcttggtcatgtcattcataagcatcctaacaagtttctaactgattttaagagatgtgtctatgaggagagatcggagtatcatttcaacaagatgtggcatgaattgtggagtgaatacaagcttgaggataacgtatggatgtcaaatctatataggttgaagaaaaagtgggctattgtctttcgtgactcttttacagctgatatgacctcgactcaaaggagcgaaggtatgaataatgtcttcaagaaaagatttcgtaggaaacttggtctttctgagctccttgtagaatgtgataaggttgctgccagtcttcgtgaaaatgagttggatgcagattttaagtcaagaaactcgagccccgttacttgcatcccaaatttacctatgttgaagaccgcagctgactcatatacaaggaagatgtattcagagtttgaagaggagtttacaaaacaattttcattatcatgtaagttgttgcaaactgaagggtcaatattgacattcatggttatgcccatggaatcagatcaggaagcaacagttgtgtataacactgcggatatgaccattacatgttcttgcagaaagtacgagtccattggtatgtatgcacactttaaatcgcattataatttttttatacaaacatctgaaaaatggcatccacatcttataggtatattgtgcaagcatgccctcagagtcttcaatatgaatgaagttttcactatgccatctcaatatatactcaacaggtggacaaaatatgcaaaaaaaaggatttaatattgataaacaaggaagtgagaaggaaactttgaaaacacatgctgcacgtatctctcaaaaggcaacatccatcgctttgaaatgttcagtttcgaaagaacttcttgatgatttggagaaagccataaataatttggacttggaggcagatagttctctaagcaagatgcaagaaaaaacatgtgaggttcctctaaattcaaatgactgtgttatggacacattaaatggtgcaatatcaattagagttcctcgagtggtcaaaggcccaaagagtagacgatcaaaagatgcagttgaaaagaagaaacggaagaaaacaaaaactgctaagaataaaggtgctgatcctatccattccggcatgtttattcccattgtatgcttgtataattaatttttttatactctgatattttgtatgtttgaactatataggagaagatctaaataatgcatcagaagatgaagatgaagatgttggtgatgtgtgtgggcaatctttgaccatggctgcaaatgatgtgtgtgggcaatcctcgaccatggctgcatatgatgtgtatgggcaatcctcgacaatggctgcatatgatgggtttgggcaatcctcgaccatggatgctcctttaatccaaggcggatttacaagtcttttatttggagttcagcaagattcagccatggctgctagaaagttacatttcaattaa</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0389800, RefSeq:Os08g0389800