Os08g0390200

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Revision as of 12:59, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0390200| Description = Similar to 2-oxoglutarate-dependent oxygenase| Version = NM_001068258.1 GI:115476253 GeneID:4345475| Length = 1473 b...")
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Gene Name

Os08g0390200

Description

Similar to 2-oxoglutarate-dependent oxygenase

Version

NM_001068258.1 GI:115476253 GeneID:4345475

Length

1473 bp

Definition

Oryza sativa Japonica Group Os08g0390200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:18579794..18581266

Sequence Coding Region

18580008..18581198

Expression

GEO Profiles:Os08g0390200

Genome Context

<gbrowseImage1> name=NC_008401:18579794..18581266 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:18579794..18581266 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccaccttctccggcaccgaccgcctccgcgacctccacgccttcgacgacaccaaggccggcgtcaagggcctcgtcgacgccggcgtcaccaccgtcccctacttcttccgccaccaccccgacccactccccgtcgccgcgccgtcggaggccgccgcggccatccctctcatcgacctcgccaaggccgacgtcgaccgtggccacgtcgtctcccaggtgaggtccgccgccgagtcggccgggcttttccaggtggtgaaccacggcgtcgccggggagctcatggacgcgatgctcgcggcggcgcggcggttcaacgagcagcccgcggaggcgaaggcgccctactacaccagggacctcggcagcaaggtccggttcttctgcaacttcgacctgttccagtcgccggcggcgcagtggcgcgacacgctgtacgtggagatggtgcccgacgcgccctcgccggaggagatcccgccgccgctcaggggcgtcgcggaggagttcgccgcggcggtgtggcggctcggcgagcgggtgaccgagctgctctcggaggcgctgggccttccccccgggtacctcgccgagcacgccgggtgcatggacggcatgagcatggtggcgcagtactacccgccgtgcccggagccggagaagacgatgggcacgacgcggcactccgacccgagcttcctcaccgtgctgctgcaggacgagtccggcgggctccaggcggtgctcccgcggcccccggaggagcggtgggtggacgtgcccccggtggccggcgcgctggtggtgaacgtcggcgacctcctccagctggtgtcgaacggccggctccggagcatggagcaccgggtgctgcccaccgccgccagcgcggcgcgggcccgcgtggcggtggcgtgcttcttccggctcgagtactcggcgtcgttgacgaggccgaggtcgtacggcccgatcgtggattccggcgaaggcggcgcgcggcgggcggcggcggtgtacaggagcacgacgccgagggatttcctggcgtacttcaacggcaaggggctcgacgggcggtcggcgctggagcatttcaggattccggaggcggctgcggcttcttccgccgtcgacgtcgtctcctcctccaccaccgccgccgcatccattccacggtag</cdnaseq>

Protein Sequence

<aaseq>MATFSGTDRLRDLHAFDDTKAGVKGLVDAGVTTVPYFFRHHPDP LPVAAPSEAAAAIPLIDLAKADVDRGHVVSQVRSAAESAGLFQVVNHGVAGELMDAML AAARRFNEQPAEAKAPYYTRDLGSKVRFFCNFDLFQSPAAQWRDTLYVEMVPDAPSPE EIPPPLRGVAEEFAAAVWRLGERVTELLSEALGLPPGYLAEHAGCMDGMSMVAQYYPP CPEPEKTMGTTRHSDPSFLTVLLQDESGGLQAVLPRPPEERWVDVPPVAGALVVNVGD LLQLVSNGRLRSMEHRVLPTAASAARARVAVACFFRLEYSASLTRPRSYGPIVDSGEG GARRAAAVYRSTTPRDFLAYFNGKGLDGRSALEHFRIPEAAAASSAVDVVSSSTTAAA SIPR</aaseq>

Gene Sequence

<dnaseqindica>69..1259#ccaccagcacggcggcagcactcaaacgttcattcaccgcacaacaccacactcgcggactcgcccatatggccaccttctccggcaccgaccgcctccgcgacctccacgccttcgacgacaccaaggccggcgtcaagggcctcgtcgacgccggcgtcaccaccgtcccctacttcttccgccaccaccccgacccactccccgtcgccgcgccgtcggaggccgccgcggccatccctctcatcgacctcgccaaggccgacgtcgaccgtggccacgtcgtctcccaggtgaggtccgccgccgagtcggccgggcttttccaggtggtgaaccacggcgtcgccggggagctcatggacgcgatgctcgcggcggcgcggcggttcaacgagcagcccgcggaggcgaaggcgccctactacaccagggacctcggcagcaaggtccggttcttctgcaacttcgacctgttccagtcgccggcggcgcagtggcgcgacacgctgtacgtggagatggtgcccgacgcgccctcgccggaggagatcccgccgccgctcaggggcgtcgcggaggagttcgccgcggcggtgtggcggctcggcgagcgggtgaccgagctgctctcggaggcgctgggccttccccccgggtacctcgccgagcacgccgggtgcatggacggcatgagcatggtggcgcagtactacccgccgtgcccggagccggagaagacgatgggcacgacgcggcactccgacccgagcttcctcaccgtgctgctgcaggacgagtccggcgggctccaggcggtgctcccgcggcccccggaggagcggtgggtggacgtgcccccggtggccggcgcgctggtggtgaacgtcggcgacctcctccagctggtgtcgaacggccggctccggagcatggagcaccgggtgctgcccaccgccgccagcgcggcgcgggcccgcgtggcggtggcgtgcttcttccggctcgagtactcggcgtcgttgacgaggccgaggtcgtacggcccgatcgtggattccggcgaaggcggcgcgcggcgggcggcggcggtgtacaggagcacgacgccgagggatttcctggcgtacttcaacggcaaggggctcgacgggcggtcggcgctggagcatttcaggattccggaggcggctgcggcttcttccgccgtcgacgtcgtctcctcctccaccaccgccgccgcatccattccacggtagcaatcgtgtcggtgcgtgttgaggttgttgcttgctggtagctagtgtgtgttatccggaagggtcgtagcagtgtacgcgtggcgatttgttggttgccagtcaggttaggccaggtgttacgtcactgattaatttgtatgatcgtactatggatggcatgtaaaacttggtgatttttgtactgtaataaatgtcgatcttgacgtggttt</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0390200, RefSeq:Os08g0390200