Os08g0393700

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Revision as of 12:59, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0393700| Description = Conserved hypothetical protein| Version = NM_001188631.1 GI:297726392 GeneID:9268342| Length = 3409 bp| Definition ...")
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Gene Name

Os08g0393700

Description

Conserved hypothetical protein

Version

NM_001188631.1 GI:297726392 GeneID:9268342

Length

3409 bp

Definition

Oryza sativa Japonica Group Os08g0393700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:18766194..18769602

Sequence Coding Region

18766194..18766220,18768729..18768966,18769040..18769341,18769400..18769468,18769540..18769602

Expression

GEO Profiles:Os08g0393700

Genome Context

<gbrowseImage1> name=NC_008401:18766194..18769602 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:18766194..18769602 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtccctctccgtcttcttcttcctcacctcgcggcggtggctgccggcggcgccggagctgagcggtgagcacgccgaagctgcagccgtatcgatgcggcggcggcagcggtgggaagacggtggggaggtccacgccgccgtgtcggtggcagcggtggccaccaccaccgcgtcctccagcagtggcagggacgaccgcactgcgcgcaccaacatgaccattccgtccgcggcgaagctgttccccgcccagtgcgtcgaggccgccgagtccctcggtgccgagcgcgaccacctcaccgccgccgtcgccttcactgtcagcgtccgcctcccggcgacatcgtcaccatcaccgccgccgctgccaatggggcaacggttcgccctcgctgttccacccattcacatcatctccatcgaggcaccggacgtgtggaacgtggccgctgtgatccccgtcgagaagaacgccatcgctgccatcaaccatcaccaacactacaaacacaacgcccagaagcagcagcatcaccaccgccaccgtggcaacggcagcaacacgagcaacagcttcggcgacgacgacgacgacaacaacttcctcaccatctgcagccaagaactcctcgcccgtggcaccgactcctcaagcgcacccgcaaaggccttcttccgctgggcgatcaagtag</cdnaseq>

Protein Sequence

<aaseq>MSLSVFFFLTSRRWLPAAPELSGEHAEAAAVSMRRRQRWEDGGE VHAAVSVAAVATTTASSSSGRDDRTARTNMTIPSAAKLFPAQCVEAAESLGAERDHLT AAVAFTVSVRLPATSSPSPPPLPMGQRFALAVPPIHIISIEAPDVWNVAAVIPVEKNA IAAINHHQHYKHNAQKQQHHHRHRGNGSNTSNSFGDDDDDNNFLTICSQELLARGTDS SSAPAKAFFRWAIK</aaseq>

Gene Sequence

<dnaseqindica>3383..3409#637..874#262..563#135..203#1..63#atgtccctctccgtcttcttcttcctcacctcgcggcggtggctgccggcggcgccggagctggtacccctcttccttagttatttgctaatttaacaaattttttttttgaaaaaaaatgtgttgttttgcagagcggtgagcacgccgaagctgcagccgtatcgatgcggcggcggcagcggtgggaagacggtggggaggtggctgaaggagggaatgagaagaagacgggaggagacgcgtgcgcacaacgcgcaggtccacgccgccgtgtcggtggcagcggtggccaccaccaccgcgtcctccagcagtggcagggacgaccgcactgcgcgcaccaacatgaccattccgtccgcggcgaagctgttccccgcccagtgcgtcgaggccgccgagtccctcggtgccgagcgcgaccacctcaccgccgccgtcgccttcactgtcagcgtccgcctcccggcgacatcgtcaccatcaccgccgccgctgccaatggggcaacggttcgccctcgctgttccacccattcacatcatctccatcgaggcaccgtgattgatcttgttcttgatatctgaacgcagcattgagaggcgtggcgacggtcaaggcgagggcgttcagggacgtgtggaacgtggccgctgtgatccccgtcgagaagaacgccatcgctgccatcaaccatcaccaacactacaaacacaacgcccagaagcagcagcatcaccaccgccaccgtggcaacggcagcaacacgagcaacagcttcggcgacgacgacgacgacaacaacttcctcaccatctgcagccaagaactcctcgcccgtggcaccgactcctcaagcgcacccgcaaaggtaacctacccaaacaccattgatcatttgctattcgattcaacaaaatcatttcgagtcagccgaagcgcttggtcaacatgccacattcgaaggttttcactctgttcgattggctcatgattttgtttcatttccatttttgtttcccattcgaaggttttcattttgttttgtggaatttgttgtttcgaatcctgtctgcttgcccctagatctcgagctgcaaagtttgtgcggccaggagcaggtacacatcgggagtgaccgatttactccttttgcattttttttcatgggatggcggatggatggagcaatggatctcggcgcccctgacccgaactgaatctagcacacagcagctcaaaagcgatctgcatcccgtggtccaagctctgatctatgcgtgggtgatgagccccatcgagcttctgttattcggactcgaagctctgaattatttagggaggtttgaaccgcctttttgctatttgctgcaacctgcaagttctataaatttgtgttcagtcatattcttgttcttgaccacttgagtcttcttatgcagtaaagtagcacaaatctgtccatgataatctttttagtgagttttccgttcaggagctttgatatcctgctctgttcaacaaagcaactaaaaatgtgctgctctattcataatgaatccatcctaggaattttggggctctagatttccactatgttgttctgaaaaaatgttggtgtgcttgttgcttctcattccctccgtcatttataccatattagtaagttttgtcagaaacatttgatggagtagcaggtttttgaaaatttctggttcgacagggcaactcaaatgttttcttgtgttgattttgtttttgccatataagagtagcaatcttttcaagtattatttgcaggatggttatatgagaatcaatcaattgtttttttttactgaaacgccaaactcttcccttcagcccatctgaacgaattttgctcgtatatggcctttctgacgatatgtacgtggtatttttttttactgcatgtctataaatttttagatacccacgagtgtatacggtgtacccctgatatatctgtgatattaccctagaaaaaataaagagatatctgtgatatgtcctgattttgttgaagaaaatgatgtagcaaatgaagagcaccgggtgatcgagttcgagtgcagcatccatagagagcattgacatgtgaaccaaagggcatcgctagcctcctcgccaccgtcgcctgccgtcgcaaccgcttcgcctgaccaacgccgcccgtcaccggcattgcctgcaaggctgttgtgattttggcagaagagggggcatggatcatgtcactcttcactgtagctgttattaggagcagaaaactgaacaagattcagagatggtttgtagatgtgtgtggtgtttattcctcttttcttttttttttgttttatgtgtcatgtaagaagtgtcgttttgtatcttcttatcttttccgttgtctctgatttaacttgaggggtttgggcaatgggaatacagacggacaagcatcatctacatttgtaatatgtggtgtctgcagggaatcataacttcgtaagtgattttgctcttccagtaatcatggtttcactctattattgacaaaaacatggggcgaattcttacagattttgcctaaaaattgaattcagcattttttttctcaaacctggttattttgctgagcggtttcttgatttctacaggcttgataaagcctataactgcggtaacttagctactccctctgttaactaagtcaaacgctttgatcattaattttttaaaaaccttgtttaatttaagtaagatgtgaattatatattgtaaaagtattgttcatggtgaatctaaaacatagatcttacgatttttaattaagttgatttttaggaattgatgatagaatatacaagtgttttatttagaaaaagttaaaacaacaagtaatttgaaacagacaaaagactttgttagcatgtgaacttatttaaatgttcttgtgtttttattgtcattaccaatagtctgttttatgtctattgtgttcaatgataccacaagtgcagcgcggcgtgagccgcgccagcccatctagtatgaatcaaatggtgatagttaccttcttcatccttaaaaagcagaaaatctacacatcatttttgggcacagatatggagtacaattttatttacagaaggaaaagccgatctttggtaggacacaccattagcaaatcatgaaaatggtactcgtgtacatttttatttaccaagggaaaagatagtctgtatttcggcatttccattctaatacacttttacttatttgctcaagaaacggtagcaacctgagctgtagccgcgagcagaaatcagagtagatagctcttgagtatagttatgtggtttttgcttttgccaaggccttcttccgctgggcgatcaagtag</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0393700, RefSeq:Os08g0393700