Os08g0398300
| Gene Name |
Os08g0398300 |
|---|---|
| Description |
ABC transporter related domain containing protein |
| Version |
NM_001068278.1 GI:115476293 GeneID:4345498 |
| Length |
5665 bp |
| Definition |
Oryza sativa Japonica Group Os08g0398300, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 8:19081298..19086962 |
| Sequence Coding Region |
19081331..19081423,19081531..19081915,19082026..19082108,19082213..19082357,19083070..19083198 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008401:19081298..19086962 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008401:19081298..19086962 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggcagacacctcctcctcgtcgtcgtcgaggggcgccgccggattcgccacgcaggccaatgccctcctccgcaagaacctctgcttccagaggaggaacatgaagacgaacgcgtgcatcacggtgttcccggtgttcctgtgcgtgatcctcgtggtgctccagggggtgatcaaccacgagatcaacaagcccaagtaccagtgcggctgcgcctgcgtggacgccgcgccggacgggacctgccggaggacggagtgcggcgtcgagcactccacgctggaccaggtggggagctgcccgatcaagagcccgacgccatggccggccttggtccaggtcccccgccccgagtcccgggccgtcaggatcgcctcccagccgttcgacggtttgcctgacccgacctgcagggacacagggtcttgccctgcctctgtccttgtcaccggaatgaaccgctcgcttgctcaaagtctttggggtggattgttccctgctgtgcctccctctctgaatttcacggattatcttgacgcgttctccaagattgttgctgggtcagacacatggacatggacaacgcagttcatagagccggtatttaccccagggcattctttatatgtggtccagcctcagtgttcgtccaatttatcacgaacaatttctaacaaagctggacctgtacccattcaactcaatatagactgcgttcaaggcttatcattatggcgtgaaagtgcatcacaaattaataatgaactatttagaggttatagacagcaaggtggaggaggtggaggaggaaagacaaatgaatttattgcaggctatgattttctgaacacaaacaacaatggtcttgaaataaacatttggtacaactctacatataacaacaacactgcatatgacgtcatctcattgctacgagttccacgcttggttaacacggcatccaatgcatacatgaaatttcttaaaggaagtggagtggagatgctgcttgaatacgttaaagatatgccaaaagtaggaaccaaaccaaaatttgatctctcttctcttcttggtgctctgttcttcacctggatcattgaactactttttccagttatcttaacatatctcgtgtacgagaagcaacagaagctgaaaattatgatgaagatgcacggcttgaaggatgagccttactggatgatatcatattcttacttctttgctctatcagctgtctatatgatagtgtttgtggtatttggatccttgataggtttaaatttctttaaaacaaataactacggcattcagtttgttttctacttcatctacataaatcttcagatcgcacttgcatttttcgttgcggccttcttttcttctgtaaaaacagccacagtggttggttatatatatgtatttggttctggcttactaggggcatttcttctgaggttttttgtggagtctactagttttccgaagggttggatagtagtcatggaaatcatccctggattttcgctgtaccgagggttatatgagcttggtcaatatgcattctctggaaatgcaatgggaacaaatggtatggagtggactaatctgagggactctgagaatggaatgcgcaatgtcttgattatcatggttgtcgaatgggctattctactcccattagcattttatttggataaaatctcatcattgggtagtggagcccgtaaaacacccatgttcttcttgaaacgtttcaaaaatcgtgctgtatcactgcggaggagctttgggagacaagggtctaaagtagttgttgaaatggacaaccctgatgtttcccaagaaagagaggtagtcgagcaacttctgctggaaccaaatgcaagccaagcaatcatatgcgacaacctgaagaaggtttaccatggaaaggatggaaacccggacaaacttgcagttcgagggttgtctcttgccctccctaaaggccaatgttttggtatgcttggcccgaatggagctgggaaaacatcatttatcagcatgatgattgggctcattccacccacatctggcacagcattagtccatgggatggacataaacactgatatggatagcatctacacaaatatgggtgtatgcccacaacacgacctactttgggaaacattgactggaaaagagcatctattgttttatgggagattaaagaatcttaaaggcgctgaattagagaaggcagttgatgactccctgaagaatgttaacctgtttcacggtggtgttggaaataagcaagtggggaagtacagtggtggcatgaaacgaaggcttagtgtcgcaatctcattgattggggaccccaaggttgttttcatggatgagcctagcactggactagatccagcatcaagaaataacttgtggaatgttgtgaaggaggcaaagaaaaatcgtgctatcattcttacaacacattcaatggaagaggcagaggtgctatgtgatagactcggtatttttgtagatggtggttttcaatgccttgggaatccaaaggagctgaaagctagatatggtggcacatatgtgttcactatgacaacatcttcagaacatgaacaggaggtcaaacagctggttcagcatttgtcaccaagtgcaaacaggatatatcacatatcagggacgcagaaatttgagctgccaaaacaggaggtgaagatagcagacgttttccatgcagttgagaaggcaaaaagacagttcagcatacacgcttggggcctcgtcgacaccaccttggaggatgtcttcatcaaggttgccaaaggagcacaaggagtcaatgtgatcgcgtaa</cdnaseq> |
| Protein Sequence |
<aaseq>MADTSSSSSSRGAAGFATQANALLRKNLCFQRRNMKTNACITVF PVFLCVILVVLQGVINHEINKPKYQCGCACVDAAPDGTCRRTECGVEHSTLDQVGSCP IKSPTPWPALVQVPRPESRAVRIASQPFDGLPDPTCRDTGSCPASVLVTGMNRSLAQS LWGGLFPAVPPSLNFTDYLDAFSKIVAGSDTWTWTTQFIEPVFTPGHSLYVVQPQCSS NLSRTISNKAGPVPIQLNIDCVQGLSLWRESASQINNELFRGYRQQGGGGGGGKTNEF IAGYDFLNTNNNGLEINIWYNSTYNNNTAYDVISLLRVPRLVNTASNAYMKFLKGSGV EMLLEYVKDMPKVGTKPKFDLSSLLGALFFTWIIELLFPVILTYLVYEKQQKLKIMMK MHGLKDEPYWMISYSYFFALSAVYMIVFVVFGSLIGLNFFKTNNYGIQFVFYFIYINL QIALAFFVAAFFSSVKTATVVGYIYVFGSGLLGAFLLRFFVESTSFPKGWIVVMEIIP GFSLYRGLYELGQYAFSGNAMGTNGMEWTNLRDSENGMRNVLIIMVVEWAILLPLAFY LDKISSLGSGARKTPMFFLKRFKNRAVSLRRSFGRQGSKVVVEMDNPDVSQEREVVEQ LLLEPNASQAIICDNLKKVYHGKDGNPDKLAVRGLSLALPKGQCFGMLGPNGAGKTSF ISMMIGLIPPTSGTALVHGMDINTDMDSIYTNMGVCPQHDLLWETLTGKEHLLFYGRL KNLKGAELEKAVDDSLKNVNLFHGGVGNKQVGKYSGGMKRRLSVAISLIGDPKVVFMD EPSTGLDPASRNNLWNVVKEAKKNRAIILTTHSMEEAEVLCDRLGIFVDGGFQCLGNP KELKARYGGTYVFTMTTSSEHEQEVKQLVQHLSPSANRIYHISGTQKFELPKQEVKIA DVFHAVEKAKRQFSIHAWGLVDTTLEDVFIKVAKGAQGVNVIA</aaseq> |
| Gene Sequence |
<dnaseqindica>34..126#234..618#729..811#916..1060#1773..1901#1997..2121#2211..2369#2453..2615#2700..2825#2898..2981#3060..3421#3522..3722#3823..3932#4029..4113#4248..4376#4455..4560#4638..4726#4835..5134#tagcttctccccccacctcctccgcctccgacgatggcagacacctcctcctcgtcgtcgtcgaggggcgccgccggattcgccacgcaggccaatgccctcctccgcaagaacctctgcttccaggtcccctcctccctctttctttcttggcgcgtctccccgatttcgcaggttttggttcgatttcctcaccgtttcttgcttgcttgcgatttcttgctttgatgcagaggaggaacatgaagacgaacgcgtgcatcacggtgttcccggtgttcctgtgcgtgatcctcgtggtgctccagggggtgatcaaccacgagatcaacaagcccaagtaccagtgcggctgcgcctgcgtggacgccgcgccggacgggacctgccggaggacggagtgcggcgtcgagcactccacgctggaccaggtggggagctgcccgatcaagagcccgacgccatggccggccttggtccaggtcccccgccccgagtcccgggccgtcaggatcgcctcccagccgttcgacggtttgcctgacccgacctgcagggacacagggtcttgccctgcctctgtccttgtcaccggaatgaaccgctcgcttgctcaaagtatgttcttagttcgaagacatactagaaggggaaaaaaacatctgatttgttgttcaatctttggatcaaaagtgttcattaattcattgatgctttactgttggcaggtctttggggtggattgttccctgctgtgcctccctctctgaatttcacggattatcttgacgcgttctccaagattgttgctgtgagtttattcgtgcctaatggcagaattgcttgtacagtcattagtcatggttgccatgttctctaatgtgtggagctcttgattggatttatttgtcttaggggtcagacacatggacatggacaacgcagttcatagagccggtatttaccccagggcattctttatatgtggtccagcctcagtgttcgtccaatttatcacgaacaatttctaacaaagctggacctgtacccattcaactcagtaagttgcttttcttttcacagtttttcgttcagctgcatctttgtttgaaggaagcaggtagcgaaaacagggtaacttgctaggcctaacttatttaatttaatatgtactaggaagtaaaggcatatggtataccgaataagtaggtaattatgataatattataaaaaaatcattgccatttggaattactacctcagcactggtcacagttatattctcggacctggaattgcacagtattcctcgtcattatcaatagtcagacttaatgcctggtaaaaagagtagtagtcgtaccgcgttatttgtcagttataccctccagtaagaaatacaagtcgttttgaaatgctcttttgtaatattataggtctatcgcgttttataaatatattgcaacagaaatcagcggtcaaagatgcattttagaaactgtgtatatgttcaagacaacatgtatttgggactgggggaggcattattaaataagacaccaaagccatattggcataaagttctataacatcatttgactataaaaatctagatttaaatatgtttgattagcaatgttctgttgatgttgaattccagtgttatacttcaacagtaagactaaagtctgtcaatgtcccttcaatctttcatatatgtttcctacacctgtgaaaatgtccaaatctgatatgcatttcgcaatgtccagatatagactgcgttcaaggcttatcattatggcgtgaaagtgcatcacaaattaataatgaactatttagaggttatagacagcaaggtggaggaggtggaggaggaaagacaaatgaatttattgcaggtgatttcatcttctgatcccctcagagaaaagtgtctgccactattgatgtaatggttccttaccttatgtctaagtttgctttttttccaaaggctatgattttctgaacacaaacaacaatggtcttgaaataaacatttggtacaactctacatataacaacaacactgcatatgacgtcatctcattgctacgagttccacgcttggttaacacggtacgtacactgaacttccactacctcaagtctaacaattttcatatgcactacaactactaatacaactcattccatctttcctataggcatccaatgcatacatgaaatttcttaaaggaagtggagtggagatgctgcttgaatacgttaaagatatgccaaaagtaggaaccaaaccaaaatttgatctctcttctcttcttggtgctctgttcttcacctggatcattgaactactttttccagtgagtatgagatgcaacctttcttaactcttacataagttgcagaggacatcaaattagttggtacttcattttgttcccaggttatcttaacatatctcgtgtacgagaagcaacagaagctgaaaattatgatgaagatgcacggcttgaaggatgagccttactggatgatatcatattcttacttctttgctctatcagctgtctatatgatagtgtttgtggtatttggatccttgataggtaatcaactggaaatttcttcaatccattgtatttttgcaaataaatttatcatgcttacaaaattaactttcttccttacaggtttaaatttctttaaaacaaataactacggcattcagtttgttttctacttcatctacataaatcttcagatcgcacttgcatttttcgttgcggccttcttttcttctgtaaaaacagccacaggtttgtgattcaaatgctcaacttccaaagaagactcgtggatgactaatttgagaaatttctgtgctgcagtggttggttatatatatgtatttggttctggcttactaggggcatttcttctgaggttttttgtggagtctactagttttccgagtaggtttcttttctatttattttagctattgttttttatatcttatgcatgacgagcattgttttctccattcaaagagggttggatagtagtcatggaaatcatccctggattttcgctgtaccgagggttatatgagcttggtcaatatgcattctctggaaatgcaatgggaacaaatggtatggagtggactaatctgagggactctgagaatggaatgcgcaatgtcttgattatcatggttgtcgaatgggctattctactcccattagcattttatttggataaaatctcatcattgggtagtggagcccgtaaaacacccatgttcttcttgaaacgtttcaaaaatcgtgctgtatcactgcggaggagctttgggagacaagggtctaaagtagttgttgaaatggacaaccctgatgtttcccaagaagtaagttaatcctgattttgtatatatgttgaaatcgtgttgttgcatattctcaaattgcataaatgtttcattcctgattttgctaaattgtatccagagagaggtagtcgagcaacttctgctggaaccaaatgcaagccaagcaatcatatgcgacaacctgaagaaggtttaccatggaaaggatggaaacccggacaaacttgcagttcgagggttgtctcttgccctccctaaaggccaatgttttggtatgcttggcccgaatggagctgggaaaacatcatttatcagcatggtacagtggcaacaagtagctcttcaattctgacaaaaaaaatagacaatgttgcacgatccttacttggcatatactttccatgttttttcctccatagatgattgggctcattccacccacatctggcacagcattagtccatgggatggacataaacactgatatggatagcatctacacaaatatgggtgtatgcccacaacacgagtatgattcttgctctaaaactaatttatttagtaccatttttatggtaatccattgcaaaatatattgtggttgctaatgctgcttaaaatacagcctactttgggaaacattgactggaaaagagcatctattgttttatgggagattaaagaatcttaaaggcgctgaattagagaaggtatagttatcttcacactcatctctttattttccttcactgtaaattggtgtgttaattttgtcttgtggtaacaattccaatattacacatgaatatatcaatatttgaactgacaaatagcatactatcaggcagttgatgactccctgaagaatgttaacctgtttcacggtggtgttggaaataagcaagtggggaagtacagtggtggcatgaaacgaaggcttagtgtcgcaatctcattgattggggaccccaaggtactaatatgatttatgtgtgttgattttcaactgcacataatgcaatggaatgtgcaactgaaaaagttcttttaggttgttttcatggatgagcctagcactggactagatccagcatcaagaaataacttgtggaatgttgtgaaggaggcaaagaaaaatcgtgctatcattcttacaagtaatgagctttcctgaccttctttaaattgcctatatgaacaataatagtggataatccagtatgttttttttcagcacattcaatggaagaggcagaggtgctatgtgatagactcggtatttttgtagatggtggttttcaatgccttgggaatccaaaggaggtaatttacatagttacctgcaaaaacaaataaatacacttaatgtaacatgcctattataaacatttgttaatatctgaatatttggattgcattctgttttggcagctgaaagctagatatggtggcacatatgtgttcactatgacaacatcttcagaacatgaacaggaggtcaaacagctggttcagcatttgtcaccaagtgcaaacaggatatatcacatatcagggacgcagaaatttgagctgccaaaacaggaggtgaagatagcagacgttttccatgcagttgagaaggcaaaaagacagttcagcatacacgcttggggcctcgtcgacaccaccttggaggatgtcttcatcaaggttgccaaaggagcacaaggagtcaatgtgatcgcgtaaataatattatggatcgataggtggttattttttttccttcataggatcatgtgttgtatatagtttgtttgaactatatgctaacctttacttggcattgtgattgagttgttcatgtagtatggtaaagttgtatatttagcaaccatggaattcatattgtaatgtataacaccaattaggcctttttgggtttagagggggttgaaggggatttgagggatttgagggggaataattccacatcacaataggtgtgcaataaatcccctccaatccctccctcttggggattaaccgaacatggccttagtggtagttgattttgactaaaaccagctgagcagaatgtgcatatttaaaactatatcgggtttttttcccgcaaacagaaagctatatgcgattttattttatttagtaaaatgttgaaaacaatgttaagaaagcacattacctagtccctacttgtatctttctttgattcattatccttcaatgacatcctgaacaatacattaatagcttctg</dnaseqindica> 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| External Link(s) |
