Os08g0398700

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Revision as of 13:00, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0398700| Description = Peptidase M1, membrane alanine aminopeptidase family protein| Version = NM_001068281.1 GI:115476299 GeneID:4345501| ...")
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Gene Name

Os08g0398700

Description

Peptidase M1, membrane alanine aminopeptidase family protein

Version

NM_001068281.1 GI:115476299 GeneID:4345501

Length

9755 bp

Definition

Oryza sativa Japonica Group Os08g0398700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:19109823..19119577

Sequence Coding Region

19109921..19110128,19110232..19110379,19111989..19112091,19112311..19112497,19112615..19112708
,19112817..19112970,19113126..19113230,19113323..19113439,19114343..19114456
,19115217..19115399,19116195..19116486,19116573..19116694,19116806..19116903
,19117122..19117299,19117377..19117491,19117578..19117645,19117773..19117850
,19118984..19119061,19119144..19119329

Expression

GEO Profiles:Os08g0398700

Genome Context

<gbrowseImage1> name=NC_008401:19109823..19119577 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:19109823..19119577 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggcctcgccggagcagttccggggccaggcgcggctcccgcggtgcgcctccccgctcagctacgacctccgcctccgccccgacctcgccgcctgcgccttctccggctccgccgccgtcgccgtcgccgtctccgccccgacccgattcctcgtcctcaacgccgccgagctcgccgtcgacggatcctccgtccgcttccaggatttggtgccttccgaggtggtgcagttcgaggaggacgagatcgtggtcatcgggttcggccaggatctgccgatcggcgagggcgtgctcaagatggacttcaccgggacgctcaacgatcagatgagaggcttctacaggagcaagtatgagtacaagggggagtcaagaaatatggcagttacacagttcgaagctgctgatgcaagacgatgttttccatgctgggatgaacctgcatttaaggctaagttcaagctaacactggaagttccatcagagttggtagcactgtccaacatgccagtaattaaggagacagttcatggacctctcaagaccgtctattatgaggaatcgccacttatgtcaacttatctagtggctatagttgttggtttatttgattacatagagggctcaacattagaaggcaccaaagttcgtgtgtatactcaagttggcaagagtaaccaaggaaagtttgcactagatgttgcagtgaagtcactggatttattcaaagattattttgccactccttacccgctaccgaagttggatatggttgctattcctgattttgctgctggagctatggagaactatgggttggtcacttaccgagaaacagctttactttatgatgagctgttatcctcagcatccaataaacaacaggttgcaatcactgttgcacatgaattggctcatcaatggtttggcaatcttgtaaccatggagtggtggactcacttgtggctaaatgagggttttgcttcctgggtgagttatttggctgtggaagcattatttccagaatggaataactggacacaatttcttgatgagacgacctctggtctcagactggatgcacttgcagagtctcatcctattgaggttgacataaaccatgcctctgaaattgatgcaatttttgattccataagctatgataagggcgcttccgtcattcgcatgctgcaaagttaccttggtgcagagcgttttcagaaagctttggcatcatatataaagaagtatgcttactcgaatgccaaaacagaagatctatgggctgttcttgaggaggaatctggggaacctgttaaggatttgatgactacatggactaagcaacaaggataccctgttatttatgcaaaactagatggacatgatttgcaccttgaacaggcacagtttctatcggacggatcctctggtccaggcttgtggattgttcctataacatcatgttgtggctcatatgatgcacagaaaaagtttctcttgaagggcaagactgataaggtccatatagacctcactgcctcccaaaatgccggaggagagaagggtgaaaactgttggatcaaattgaacgttgaccaaactggattttatagagtgaagtatgatgatgaacttgcagctggacttgaaaaggcaatcaaagccaataagctctctttaatggataagattggtattgtggaagattcatactccctttctgtggctcgcaagcaaacactgacatccttgcttcgcctgctgaatgcttatcgcaatgagtctgattacactgtgctttcacatgtaacctctgtatgcttaggcattgataaaatatcagttgatgctactcctgaattgtccagagatatcaaacagcttttgatcaatcttcttctatcagctgccaaaacactaggctgggatcccaaggagggcgagagccatcttgatgtaatgcttagatcattgctcttgattgcccttgtcaaacttggacatgatgagactataaatgagggagttaggcggttccatatcttcataaaagaccgcaaaactaacattcttcccccagacactagaaaggcttcatatcttgctgtgatgcggactgttactacctccagcagagctggttatgatgccctcctgaaaatctacagagaaacagctgaagctcaggagaagtcacgcatcttaggttcattgtcttcatgcctggataaggatattgttcttgaggcactaaacttcatgcttaccgatgaggtacggaatcaagatgcattttatgtccttggtggtatcagcttagaaggacgagaagttgcatgggcctggttgaaggaaaactgggatcatgtcttgaagacctggccatcaagttcactcatatcggacttcgtcaaatctactgtttcacggttcaccacagaggagaaggctgctgaagtttccgagttcttcgccggtaaaaccaaaccatcgttcgagcgtgcactgaagcagagcctcgagagggtccgtatcagcgcgagatggatcgagagcatcaggagcgagcctaaccttgctcagacagtgaacgagctgctgcagcacgacatgtag</cdnaseq>

Protein Sequence

<aaseq>MAASPEQFRGQARLPRCASPLSYDLRLRPDLAACAFSGSAAVAV AVSAPTRFLVLNAAELAVDGSSVRFQDLVPSEVVQFEEDEIVVIGFGQDLPIGEGVLK MDFTGTLNDQMRGFYRSKYEYKGESRNMAVTQFEAADARRCFPCWDEPAFKAKFKLTL EVPSELVALSNMPVIKETVHGPLKTVYYEESPLMSTYLVAIVVGLFDYIEGSTLEGTK VRVYTQVGKSNQGKFALDVAVKSLDLFKDYFATPYPLPKLDMVAIPDFAAGAMENYGL VTYRETALLYDELLSSASNKQQVAITVAHELAHQWFGNLVTMEWWTHLWLNEGFASWV SYLAVEALFPEWNNWTQFLDETTSGLRLDALAESHPIEVDINHASEIDAIFDSISYDK GASVIRMLQSYLGAERFQKALASYIKKYAYSNAKTEDLWAVLEEESGEPVKDLMTTWT KQQGYPVIYAKLDGHDLHLEQAQFLSDGSSGPGLWIVPITSCCGSYDAQKKFLLKGKT DKVHIDLTASQNAGGEKGENCWIKLNVDQTGFYRVKYDDELAAGLEKAIKANKLSLMD KIGIVEDSYSLSVARKQTLTSLLRLLNAYRNESDYTVLSHVTSVCLGIDKISVDATPE LSRDIKQLLINLLLSAAKTLGWDPKEGESHLDVMLRSLLLIALVKLGHDETINEGVRR FHIFIKDRKTNILPPDTRKASYLAVMRTVTTSSRAGYDALLKIYRETAEAQEKSRILG SLSSCLDKDIVLEALNFMLTDEVRNQDAFYVLGGISLEGREVAWAWLKENWDHVLKTW PSSSLISDFVKSTVSRFTTEEKAAEVSEFFAGKTKPSFERALKQSLERVRISARWIES IRSEPNLAQTVNELLQHDM</aaseq>

Gene Sequence

<dnaseqindica>99..306#410..557#2167..2269#2489..2675#2793..2886#2995..3148#3304..3408#3501..3617#4521..4634#5395..5577#6373..6664#6751..6872#6984..7081#7300..7477#7555..7669#7756..7823#7951..8028#9162..9239#9322..9507#cttcttccctccctcccttccccactactctactcccccactcgccgtcgcaactcccgccgccgcaccgccgcaccgccacaccgcccccgccgcaaatggcggcctcgccggagcagttccggggccaggcgcggctcccgcggtgcgcctccccgctcagctacgacctccgcctccgccccgacctcgccgcctgcgccttctccggctccgccgccgtcgccgtcgccgtctccgccccgacccgattcctcgtcctcaacgccgccgagctcgccgtcgacggatcctccgtccgcttccaggcacgcgcgcaccgcctcccccgttaaccatccgtgtctgtttgcgttgttgccgtgtgttcgtttcagggtcgctcaatcgttgtatgatggggttttgtaggatttggtgccttccgaggtggtgcagttcgaggaggacgagatcgtggtcatcgggttcggccaggatctgccgatcggcgagggcgtgctcaagatggacttcaccgggacgctcaacgatcagatgagaggcttctacaggaggtatcgttgccacctctttcagttacagataactggtgattgttgctagtctctcgttcacatgaggtgcgaacaggcattccagcagcaacagcttgcagttctggtttattagatggtagtcgcggacgtgggatttctagatagagaatcgagttttagagaacaatgtcacgatatctatgaaaaatcatttttgatatgccattaaaaatgagtaaatagttttccatagtttggatgatttacatgaatttggagaatttttttggtttggaggctacttttctgaaaatgtataattggttcaaattcttactccaatattagttaaaaaagaagacttaagaatatctattcttcgtgctggagacgaccaattgaaacttgaggaaataagaaaaatattacatactacataggatgtatggaagagtccaagacacctaacactagtattactacaagctattgaaattctaacaaacaattactacaagctattgaaatcctaacaaacagaagacaaaaaaattgaacacctaataaagagaggagaaaaaagaattgaggatgcaggaatcgaaccctcgacatgatatataataagaaagctttaaaccagtacaataagataagctttatgatataacgcattgttttcaaatatcttgggtatccacttgaatacctatgaaccatggggggttcacacctactagatgaggtccgaagctgctattcgttgttatgagtaactaggcttcgagcagtgacttgatggaaactgcaagtgtgtgtttggaagcaatcaatagcattggcacatgaactttaacaacaagggctaggtgtaccggttcaaaaattgttgccatgcttgatgtgctaagacaatggatagtatctatatcttatttggtaatgtcctagaaagtgactaagatctcaggatctttaggatgtgagcttgaatctacaatcttatcttataatgatcgaccatccactctttgttaatcctgaaacactcttcattaaacttattgaaccatttgtgtctgcctaggatcctgatcttgtcttcaaaacacacactatacgctattggtagagtatgctgctctccatactaccataacaccatccataactcgcagcctagcacccactgttcaccaggccctatagagcattagcatatgtatatccatcttaataatgtagttttgattatgatttttttggcatgttgtaatattatagggcttggatagcaaacatagtttttgggatatttatttccatttttatttgaaattgccacaatttgatgtaactagtaccttcctgtgctatataccatttgtaagtcttagtttactcctgtcctgtctttgtgtcaccaagattcatgattggagtgtgatgtataaatactgtatatattatccaggacctccatgtttggattttatcttcatttttgtaacaaagctgtatacattacataatcagtgtagtttggagtgcaccggttgtactttctttatatccttgtgatctgtttttaatgcattgtgggtggtgtttccgtgtttgattgcagcaagtatgagtacaagggggagtcaagaaatatggcagttacacagttcgaagctgctgatgcaagacgatgttttccatgctgggatgaacctgcatttaaggtgtttaacatgctacaatgttgtttccctaggagtgttttgatgtaattcagacaggaaaatattgtaatgaaagaaaaattcagtttgcacttctagtttttacacaggtcttaactaatattttcatggtccttggctccttgctctgtagaatttggaaggttggatcaattatctaaaataacattacctcttgtctggttatttctggtttaggctaagttcaagctaacactggaagttccatcagagttggtagcactgtccaacatgccagtaattaaggagacagttcatggacctctcaagaccgtctattatgaggaatcgccacttatgtcaacttatctagtggctatagttgttggtttatttgattacatagagggctcaacattagaaggtagaatttcagtttctgtctccattgtttgctctctttcattcaaactatatgatatgtcccttctttgcctggtctttacacattttttcattggcttttgttaatttaatgtaggcaccaaagttcgtgtgtatactcaagttggcaagagtaaccaaggaaagtttgcactagatgttgcagtgaagtcactggatttattcaaagagtaagcttccaacatagtcttgcttctaagctttatttctaaagatgaggcagaataccatggatggtgcctatttcactacaataactaataatgttcttttatcagttattttgccactccttacccgctaccgaagttggatatggttgctattcctgattttgctgctggagctatggagaactatgggttggtcacttaccgagaaacagctttactttatgatgagctgttatcctcagcatccaataaacaacaggttatgcctatatttatctttatcaatttcatttgtttcatttactattggagagttagtctcgcacttgaatcctcatgtgtagttttggccaggtaaactgctatttttaaaaaagaaagaaagaaagaaaaattaacatctgttctctttaggttgcaatcactgttgcacatgaattggctcatcaatggtttggcaatcttgtaaccatggagtggtggactcacttgtggctaaatgagggttttgcttcctgggtattcaatctgaaaactattgtttgagaaattagaaatattgtccaattgttgtgtatcttaccggctaattattccatatgtttcaacaggtgagttatttggctgtggaagcattatttccagaatggaataactggacacaatttcttgatgagacgacctctggtctcagactggatgcacttgcagagtctcatcctattgaggtaatcttcttcagtatgctttggcgaagtcactgatggataagaaacataatattttgatgctgcacaaatatgcattacagatatggaagtacatgaaagcagtaagataagtgaattaacaaggatacaaattgtgcatgcatactgactagggatgaaaacagagcggatatggacagataatgctcataccatattcgttttcatatttttttgctggatacggaaacgaatacggatagctcgaatacagaaacaaatacggattatctcgaatacgaataagaatcgaacatgatcggacacaaatacggaaacaaattttttctcggaacacgtaagccaactcaacttctaatagaaacaaatatcaacatatataattagctcattttatataaaatgtagtataatttataaatatttttaaaaatttaaataatattaatagtgtggactagtgttaagagatgaactactcttaaaatctaaaaagataaagaaacggggtatgcctcatggcttctgcggatatctgaattattatccgtatccgatagaaactccgataccatattcgtattcgtatctgtatccgaactatccaagaattatccgatccgaaaggtatccgtattcgtttttctccggagcggacgggaactatctgctctgttttcatccctaatactgactagtcatacaatacaaccaatttttgatatttttataaatctttgcttaatttattcaggtgttgatgcttagaaattagatttttttttgggtagaaactcaaatatgtcaatatgctgccatgcattttttactatttctgtcttcacagagttagcacctttgtcccagttgttaatctggctatttggtatgttcgttcaggttgacataaaccatgcctctgaaattgatgcaatttttgattccataagctatgataagggcgcttccgtcattcgcatgctgcaaagttaccttggtgcagagcgttttcaggttaaatcctgttcttctttctccttgaatgaatttaccaaaatcttgttttctgcaatggtccagcctccagcatctcctgctgctagtatatcagcgctcttgaattgacactcttatccacgcatgttatatttatattcttcataaacaactcagcgctagatggctctacagaagtccagattgcatttaactcagattgattaagaaaattttgttgaccaaaaataataaagggcatcgtaattgtttgctttgactttgtttctggtcattttgcaaatctgtggtgaatctgctgaagaatatcttgagtttggatttttcttttttagtttttgtttattctttccagtaaagaaggtgatatcatagaatgcatgcggtcaacaagtcatatcaacttttaccaaaggctgtagaatatatagttgagatatataaacaatggtgtgagtgattttttcatgaaagatactcataagtttttagaccaaagtatgaagattgatccagctttactatacccaagataagagtctctttacaggaaaaataaataaagaaaagatattcataattttacaattacatcatttcttttgaatactcggtaacaacgtttagaattttagtacccatattagcatattgttgtctttctatgagattgtgtcatgttattgactttgtatttattatcacaatttattagtcttcggcaggtgctgattttgtgaattttttactctttcagaaagctttggcatcatatataaagaagtatgcttactcgaatgccaaaacagaagatctatgggctgttcttgaggaggaatctggggaacctgttaaggatttgatgactacatggactaagcaacaaggataccctgttatttatgcaaaactagatggacatgatttgcaccttgaacaggttttctggcagatttctcattctcatgttataccaacatacatgaagaactgaatatatgtatccatcggccttgccttattccattgccttatgcttcgtccaatctgaaatctaagtctttttggccttattcccaagaactaaggaagtagcaaaatggtgttgttcccttcatttattccattaaaaacacgatccatttattcataatagtagtagctttcaagtagaaagagaatggagggaaaaaagagaaaactgcctcaaaaattctacagtaacttgcacttagagagattgaaaagagtaaaagactaaaatgacttttatttggatttgaggtggtatatgtctaagttttagctgtactagtcacttgttcaggatcgcttctttccagaacctctacttttattcatacatctaatcttatattagtttgtttcttttgtttttaacttctcatagttgtctagaggacctcacctttcctcatacacacttttaggacaacatgcatgtcaccttgatcagaaactcagaaccataataactggagatgagaatatcatagtgtgctttgtgtttcatgttatctttcgttattcatgtatggtctgctgatgtctttattcacaagtgtatggttgtattttttttctcaaatgcatccaataactggcaaaattatagatttcgaagtattggaactagaaaatttcgttcttctggcccatatcagtgctttcatattgcaaaaagaggagcttactgaagtctgttctattacaggcacagtttctatcggacggatcctctggtccaggcttgtggattgttcctataacatcatgttgtggctcatatgatgcacagaaaaagtttctcttgaagggcaagactgataaggtccatatagacctcactgcctcccaaaatgccggaggagagaagggtgaaaactgttggatcaaattgaacgttgaccaaactggattttatagagtgaagtatgatgatgaacttgcagctggacttgaaaaggcaatcaaagccaataagctctctttaatggataagattggtaatgacaagatgaattttcaatactactcgtataatatatccttgtcaagattttgacaacagaaacacaatattttgctgcaggtattgtggaagattcatactccctttctgtggctcgcaagcaaacactgacatccttgcttcgcctgctgaatgcttatcgcaatgagtctgattacactgtgctttcacatgtaacctctgtaagtaaacctttcgccacctccaatgaaatcatataccttgtatctttgattgattctatggtatcaactattgttctcaatattaaatacatgcatcctttttgacaggtatgcttaggcattgataaaatatcagttgatgctactcctgaattgtccagagatatcaaacagcttttgatcaatcttcttctatcagctgccaagtatgctaacaaacttaatgttttaccattttcatcatcatgtttatctggatttcacgaatctggatattatcatttatgtgcatttgtatatttacttctgagttggcgcatgccactggtgaatttgtttctgttaataaacttctgtctactatattcctgctgttttctttctatgatcatattgaaatccttcttgtacttctaaatatcagaacactaggctgggatcccaaggagggcgagagccatcttgatgtaatgcttagatcattgctcttgattgcccttgtcaaacttggacatgatgagactataaatgagggagttaggcggttccatatcttcataaaagaccgcaaaactaacattcttcccccagacactagaaaggttcaggcttttgcttaacatactactgcagtgttacctctatgatatctagcatactgatatgcattggtctgcaggcttcatatcttgctgtgatgcggactgttactacctccagcagagctggttatgatgccctcctgaaaatctacagagaaacagctgaagctcaggagaagtcacgcatcttaggtttgtgcattccaaccgtctagcttaagcgacagcaggaattttctgatgagttgtcctggaaagtaacgtttcttctgttttaggttcattgtcttcatgcctggataaggatattgttcttgaggcactaaacttcatgcttaccgatgaggttaaccctctgaatcatttatattttacttattctgaacaaatgattccagatagtaaatggtagaatgagaaccattatacaccattggtacagaagccaatctaatctctctcttgcttgttaggtacggaatcaagatgcattttatgtccttggtggtatcagcttagaaggacgagaagttgcatgggcctggttgaaggtatgttattatagttgcagggtacctaaagtggattattatagttatctgataaacaacgcacacatttctgatatttttgaaagaaaaaacataagcactgtatgtggtgctcaatatatatatatttttactgttgtgaggggttcaaagttcaattgttctgccaaatgccaatgcatgctaggtgtctatctcaatacaagaacaaataatttgttaaaagttaacgatggaactaaaacagatgaaatagggaagatgaaattatcaaaacttcctttgcaccgaccgtgccaatatccaagttactgcaattgaatgatgttccctccctgttcacactttgcacgattaggtctcttcacccaaaactggcgcaatcaatctattttaccaaatatcattggtcctgctcttttagccaaccagaaaacaaaaaagcaaaaggttttactgagatacacagtacatcataggaaagctgttctgacagatgaactgaagccgtttatgcagttgcaccaaataggagtatgctgctaatgagctttgtgcccttaccaatggctgggaaacttattccattatctaaaaaaatttcgatgatcacctccatgagatttaaatctccaaacccattcacgagtccacaattctgcatagctctctgctattcgagggaaatccaagcttgtagcgtatgaataacaatagaacacatttttccactttatagaagagatgctgcctgcataacacactatttgatactacctccgcccccaaaataattgtaattctaggttgtttagcatatattaaggtttaagaagaaagactatgataccccttattaaatggtatataggtaagagtgggagggtagttgaaggtaaaatagagagaaatttgaataagaaatgattaatgagaccattagtattctgttgtgataactatttttggacaaattcaaatcctataaatacaattattatgggacagaggcagtaataatgagctaaacgaagaagttacattaataagttctgttatttttagcaagtctgattaggagttcagagtaagttgtacttttatgaccatgagcccatctgtgcatgatgcaggaaaactgggatcatgtcttgaagacctggccatcaagttcactcatatcggacttcgtcaaatctactgtttcacgggtacgcgaagtcaccgaccactttttgcttcattgttctccttgctctgctgctaaattcgccgttttctctgcatgatcagttcaccacagaggagaaggctgctgaagtttccgagttcttcgccggtaaaaccaaaccatcgttcgagcgtgcactgaagcagagcctcgagagggtccgtatcagcgcgagatggatcgagagcatcaggagcgagcctaaccttgctcagacagtgaacgagctgctgcagcacgacatgtagccttccttttgggctaaagctatttgtacgctcatggaggatcgtacaacacaaatgttcttcgaaaggttgtgccgggtgtggctgttctaacgatcatattttaaagtttgtttagttctatctctatcttttgcttgggcaatcgaaaagacatgtttggtcctcgcagcgaggtgtgcttggttcagcttttgtcaggactggcaatgaaaatcacaaatcttgtacagaactgtttcatttct</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0398700, RefSeq:Os08g0398700