Os08g0398800

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Revision as of 13:00, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0398800| Description = Conserved hypothetical protein| Version = NM_001068282.1 GI:115476301 GeneID:4345502| Length = 1704 bp| Definition ...")
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Gene Name

Os08g0398800

Description

Conserved hypothetical protein

Version

NM_001068282.1 GI:115476301 GeneID:4345502

Length

1704 bp

Definition

Oryza sativa Japonica Group Os08g0398800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:19119557..19121260

Sequence Coding Region

19119831..19119902,19119992..19120102,19120214..19120300,19120401..19120492,19120703..19120842
,19120936..19121114

Expression

GEO Profiles:Os08g0398800

Genome Context

<gbrowseImage1> name=NC_008401:19119557..19121260 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:19119557..19121260 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggggctggagatcatgacggacgaggctgctgctgcgccttcgcccgctgcggcggcggcgcgtgtcgagatttacccgctctgccgctactacttcggcgccagggatgttgccgctggtggcgcgggtgcggggttggagaccgccgccgaccgcgccctccgcctcaaggccaacttcgcggcgcacgggctccggaccagcgtccatggcgtcctgctggttgagctctttgatcatccgcacgtgctgctcctgcaagtcaggaactcctccttcctcctccccggtggccgcttgagaccaggggaacaagatgtccaagggctcaagcgcaaactttcaaccaagttatcggtagctggacatcaggatgacgaagacggcgacggggacgacgaatggcagattggagagtgcattgggatgtggtggagatctgagtttgatgctgctccatttccatatctacttccaaatgcccgtgcaccaaaggaatgcataaaactgttcttgattaaactgccggtgtctcgccaatttgtcgtgccaaggaacatgaagctgctagctgtgcctctatcccagattcatgacaatgctcaggtatatggctcaatcatagctggaattccaaacttgttatcgaagttctccatgaacatcatcagtgactga</cdnaseq>

Protein Sequence

<aaseq>MGLEIMTDEAAAAPSPAAAAARVEIYPLCRYYFGARDVAAGGAG AGLETAADRALRLKANFAAHGLRTSVHGVLLVELFDHPHVLLLQVRNSSFLLPGGRLR PGEQDVQGLKRKLSTKLSVAGHQDDEDGDGDDEWQIGECIGMWWRSEFDAAPFPYLLP NARAPKECIKLFLIKLPVSRQFVVPRNMKLLAVPLSQIHDNAQVYGSIIAGIPNLLSK FSMNIISD</aaseq>

Gene Sequence

<dnaseqindica>1359..1430#1159..1269#961..1047#769..860#419..558#147..325#aaaccaaaccctgtataggctcgtataggccaaggcagaagcttcccaaaccctcgctctgcccgtcgatctccgtcgccttctgatccccgcgcgcgcggctgcctatatataagttgcggtgatcggcgggcggctgcaccggcatggggctggagatcatgacggacgaggctgctgctgcgccttcgcccgctgcggcggcggcgcgtgtcgagatttacccgctctgccgctactacttcggcgccagggatgttgccgctggtggcgcgggtgcggggttggagaccgccgccgaccgcgccctccgcctcaaggccaagtacgcacgcgcgcgcgcactacccgccacctgctcgatcaaatgcgtgacgatcatgtaattttgtgtgtgtggtttgattgatctgtgcagcttcgcggcgcacgggctccggaccagcgtccatggcgtcctgctggttgagctctttgatcatccgcacgtgctgctcctgcaagtcaggaactcctccttcctcctccccggtggccgcttgagaccaggggaacaaggtgctcatcaatcatcattgctgcaatttcccaagttttcccgtaaaaattttaggaatggattgaattgaacctactattgaattcttgccatgtgcaagtgtctactgccgagtaggatgtgattttctcctcgtgggagataatgctagtgcaccggtacacttgcaatttggatgacacgtgtgttgcctggtatctctgcttcagatgtccaagggctcaagcgcaaactttcaaccaagttatcggtagctggacatcaggatgacgaagacggcgacggggacgacgaatggcaggtaactggagtgaacagagatgttcagtaatgttgggagtgagaccaccagtatgatccagcaaattattcatccttttcacgttgattatcggctatagattggagagtgcattgggatgtggtggagatctgagtttgatgctgctccatttccatatctacttccaaatgcccgtgcaccaaaggtaaagagcttgacatacactccggttcatccatgaaccatgtggtttcctcaaataatattaatgtgcttataacctgagtgaatcattttattgttgcctgtcatgaaggaatgcataaaactgttcttgattaaactgccggtgtctcgccaatttgtcgtgccaaggaacatgaagctgctagctgtgcctctatcccagattcatgacaatgctcaggtcagtttggttatcaccatccaacacaagggattttaccatctttttttaagctcagctgcttcagctgactctttttttttttgcaggtatatggctcaatcatagctggaattccaaacttgttatcgaagttctccatgaacatcatcagtgactgagatgcatgccacatgccgttaagagctgtcacggctttacatgagactagcatattcgatctagtagtagaacatgttgtgtataaactgtacctggtagaaatataaactttggaattcacgagctggtgctgtcctgtatgttgtgcaatcttttttttttcttttactgtatagaggtaatgtattgtatttgtatatgttatcaacaccaggtgtggtgttatttttgtaacccttctgatatggctgtagaaatgaaacagttctgtac</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0398800, RefSeq:Os08g0398800