Os08g0400000

From RiceWiki
Revision as of 13:00, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0400000| Description = Similar to Puromycin-sensitive aminopeptidase (EC 3.4.11.-) (PSA)| Version = NM_001068287.1 GI:115476311 GeneID:43455...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os08g0400000

Description

Similar to Puromycin-sensitive aminopeptidase (EC 3.4.11.-) (PSA)

Version

NM_001068287.1 GI:115476311 GeneID:4345507

Length

5350 bp

Definition

Oryza sativa Japonica Group Os08g0400000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:19159035..19164384

Sequence Coding Region

19162015..19162221

Expression

GEO Profiles:Os08g0400000

Genome Context

<gbrowseImage1> name=NC_008401:19159035..19164384 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:19159035..19164384 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ctaaatatcagaacactaggctgggatcccaaggatggtgagaaccatcttgatgtagtgcttagatcattgctcttgattgcccttgtcgaactcggacatgaagagactataaatgagggagttaggcggttccatatcttcttaaaagacagcaaaactaaccttcttccaccagacactagaaaagttcagattttttcttaa</cdnaseq>

Protein Sequence

<aaseq>LNIRTLGWDPKDGENHLDVVLRSLLLIALVELGHEETINEGVRR FHIFLKDSKTNLLPPDTRKVQIFS</aaseq>

Gene Sequence

<dnaseqindica>2981..3187#gcttgctcgccgcgcgctctcttctcgccgcctcggcctcgccgccgtggccgccggtgcctggacgaggaggaggtgagggcgtacgcttcggccggtccgccggccgcgccgcgccgcgcctctgtttgttctctgcttgggctcgccgtgttggcgtgtggatgtgtaacggctaatttggttcggtttttgtgcttggtggtggtggtgattgcagggctggatcgctgggagatgttgagcagcggcgcgcggtggcagccgcggcgaagcggatgggcggagtggggcggcgacgctcgcccggctcgctctcctcctcctcgtcgtcgtcgtcccgacgtcgctgcgggttggcgaggcgaggggaccagtagagtgcgggggcgcggggagaagggaacgactcatggtggagcggaaggcgagggcgcggtggtggcgccggtgagaacagcggacgcggtgccggcgagaaatgcggtggccgtcgccggtggtttggccacgcgcggcgtcgagcgggatgctggccaggtggtggcgagagaggagaagagacatggcggcgagttggggaccaagagaggattggaggagcgggccgcgcgttcgccgccgccgccgccgccgcccaagcggagggcggtgtccgctattcgccagtttcccccaggttgcggaagggacgctgctgctccagtcgcccgcggccgcggttgtgatggtggtgttcgtctgttggatgaggcaaccgctgctcctctcgctggcagcaaagatgattctgctgttccgggtgtggtggagaaggtggcgtctgtagatggtggcgattcaatggcgaatgcgcatcatcatcatcatgctatgatggacacggtcttgatgaaatcttcacatgtttcggatgagaatcaggtcgctcgcaaagttggttcactggaaaatggcgcagaagggtcagcgaggggaaagggaggacacggcggtgaattgctgggaaggaaggaagtgttggctcaagccgcgaatttgcttcccaagaggaggattgtatctgcgacgcgccgcttccctcctgggtgtgggagggacgctgtggctccacttgctcacagagaagagagtaaggtaggttcaagtttggaagccatgcctgttgatgctggttggggtgtgtcaaaggaggtggtgactacggatggccgtaataattcggttaaccagtgtgcctcgaacattgtcggaacagtaaagtgccaggaattggaggagggtgaggtagctgctgaggcatgctgtgatgtggagtcacaaaaagttgctggtcatggagaaaaacttgaaagtgctgttcctgtaacttctgctgttactgaagttttgacaaggtgtggttctgatgagatggaagggtgtagttatgctgcggaggcaactgaaaaacacttgtcaatgggtggtaaatgttcaattggtggtcctttcaatgaaattgtccacggcaagagagtgttggggagtgatggcattaaaagggaagttcctagtcttgcaatggaagatcatggcagcattgctcatgaccaagaactggtggaggttgagttaactacaggggaccatattcaggaggctcaagttgctaccactgttaacccacatgagtctacaattagtagacatgaggcagctgtttcagcaaatactgctccagaagtttctattaggcatttttctagtgtgaagaacggaaacacatcacagcatgaggagacgatatatgcatctgcagctgctgacgttgttaaggtgatgaataaatgcaaagggaccaaatccaaagctgcggctgaaccttgggctgaaggtccttccaaagaacacttcaaggctaagagggagtgtgaaaaagatgggatgaaaaaatcatccatgaatgttccaacagaagtatttcgtgatggtatcatgagaactaagttactattgacagctagaaaagcagtcaagccaccactgaatactctgcatatacccttctccatgggaaaagaggagtctgttgtaacaaatagtgcatcatttggtcctaagaagaaggtgaaggtgaaaagcccgcatgaaagtaaaggtattcctatgaagattgtctctacatctggattggcgggcaaggacaaccttatcaatgaaaaggctttgagcttggaagatgatgatattttgaaggcactagctgttcataatggaaagctagagttgtatctcaatgttccctcatgcgttgagcgtcacaggcaacatggaagtgagaatggcaatgataggagcaaaatcaggatgctatgcaggaggtttcaatttatatgcaacgctcttctacatgctgttgaacaaggctcattgatggttcgacgaattgaccttgaagctgataaaatcatcaggaaattgccgggctttactaaacatggacctactgtgggaaatgttcgtggagtcgaagtcggtgacgaatttctgtacagagttgagctagctcttgttggtcttcatcgcccataccagggaggaattgataccaccgatcataatggagtgcttgttgcaataagcatcgttgcttctggaggttatcccgatgaattgtcaagctcaggtgaactgatatatactggttctggaggaaagcctgctggtaaggagaaacacgaggatcaaaagctagggagggggaaccttgccttgaaaaattgcatcaagacaaagacacctgtccgagtgattcatggattcaaaggtcaaaatagagaggacgtcagtcattcaagagctaaacaaatcttaacatttacttatgatgggttgtatcttgtgttggattgctggagagaaggtctaaaaggttcaagggtcttgaaatacaaattacaaaagattcctggacaaccaaaacttcctctgcacatagctaaatatcagaacactaggctgggatcccaaggatggtgagaaccatcttgatgtagtgcttagatcattgctcttgattgcccttgtcgaactcggacatgaagagactataaatgagggagttaggcggttccatatcttcttaaaagacagcaaaactaaccttcttccaccagacactagaaaagttcagattttttcttaacataccgctatagtgtcacgtctttggtatctagtgtactaatatatgtattgatctgcaggcttcatatctttctatgatgcagactgttactacctccagcagaggtggtaatggtgctctccttaaaatctacagagaaactgctgaagcactggagaagtcagtcaagtcacgcattttaggactgtgcgttctgactgtctagcttaagtgacacagcagggattttatgatgagttgtgttgtcctgaaaagtaatatttcttctattgtaggtacattgtcttcatgcccagctaaggatattgttcttgaggcaccaaacttcatggtcactgatgagtgatgaggttaagctctaaatttctgaacaaacgatgattcaagacagtaaatggtggaatgagattctattctacaccatggatacataagccagtctagtctctctcttgcttgccaggtacggaatcaagatgcattttatgtccatggtggtagtatattagaagtttgagaagttgcatgggctgattgaaggtatgctatagtttcagggtacctaaagtgggttatttatgttgctatctgataaacaacgcacagatttctgatatttatgaacgaaaaaactataagcactgttgtgatgctcaatatttttactgttatgaggggttcaaagttcaagttccaccaaatgccaatacatgttaggtgtatatatcaatacgagaatcaaatttagattttacacagagctatgccaaatcaaattatggtccttgagaaggtaccatgaggtatcactttttctattgtaaatttggtacctaggtactatgaggtatcatgaggtaacaaaaaaaataatgtaaaatttggtacctcattgtacctccttaaggaccgtaaaattgctctaaagtttatggtttgaaactaaaatagtcaaaataattatgaaatagggaagctggattatcaaaattcctttctaccgttcacgccaatatcgaagttagtgcaattgtgtgtatgttaccctccctggttgcataattaggtctctttacccaaaactggtgcaatcatttgttttgctcaatactactatcattcagtcctgctcttttagaaaaccagagaacaaatccaaaaggttttcccaagtaactctgtgatagttcagaacaaaagaaacacagtacttcatagaaaacgtgggaatcaacgttctaacagatgaagtgaagctgtttatgcagttgcaccaaataggagtatgctaatgagctttgtgtacctaccagtgcagcggttgtgactgagttatttcattatctaaaagagattagatcatcacctcggtgagatgaaagctccaaccccattcatgacgctgaatagctctgcaatttaagggaaatccagcatatcaaaatgaacgcgacatatttccacttacagaaaagatgccacctgaataatgcacatcttagaatgagcaaatcaaagaagttacagtaataagttctgttatttttaacaggcctgattctggagttcagagcaagttggatatctgtgaccatgagtccccatctatgcatgatgcaggaaaaccggttcatgtcttgaagacctggccatcaaattcactactatcagacttcgtcaatttctcgggtaagcgaagttacccccttttctctccattgctcttccttctcaggcactaaattcactccttcccttttatgtttctatttgttttctgcatgatcaggtcaccacggaggagaaagctactgaattttccgagttcttcgccggtgaagggttcaaaccatcgttcgagcgtgtgctgaagcaaagcctggagagggtccggatcagcccgagatggatcgagagcatcaggccttgctcgtacagtgcatgagctgcagcagcaggaaatgtaactttctgggctaagctagaagattttacacgcatggaagttcgtacaaaaatgttcttggaaaggttgtgcggttgggccaggtgtggccactactaaaaaaaacctagataggtgctcaaccggcacctagcaagcaggcggcacatatgagagaaatgaaaggaccggcacctttgaggtcccaaaaattc</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0400000, RefSeq:Os08g0400000